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TEX21P Gene(Pseudogene)

Testis Expressed 21, Pseudogene

GCID:
GC14M064345
GIFtS:
20
Genes Participants
UDN Logo

Aliases for TEX21P Gene

Aliases for TEX21P Gene

  • Testis Expressed 21, Pseudogene 2 3 5

External Ids for TEX21P Gene

Previous GeneCards Identifiers for TEX21P Gene

  • GC14M064813
  • GC14M044984

Summaries for TEX21P Gene

GeneCards Summary for TEX21P Gene

TEX21P (Testis Expressed 21, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TEX21P Gene

Genomics for TEX21P Gene

Products:

  1. Regulatory Element

Regulatory Elements for TEX21P Gene

Enhancers for TEX21P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14G064499 2 FANTOM5 Ensembl ENCODE dbSUPER 10.2 -130.1 -130085 9.9 HDGF PKNOX1 FOXA2 ARNT WRNIP1 ARID4B SIN3A DMAP1 YBX1 ZNF2 LOC102723809 ZBTB1 PPP1R36 AKAP5 HSPA2 TEX21P ENSG00000214770 ZBTB25
GH14G065361 0.8 Ensembl ENCODE 14.5 -987.5 -987469 1.0 ZNF555 ZNF34 SCRT2 ZNF426 ZNF781 ZNF518A ZNF697 TEX21P ENSG00000258824 LOC102723809 LINC02324 LOC105370537 GC14M065336
GH14G064857 0.6 dbSUPER 14.5 -472.2 -472237 0.1 ZNF426 ZNF394 ZNF623 ZNF781 ZNF518A ZNF697 ZNF555 ZNF34 TEX21P ENSG00000214770 ENSG00000258824 LOC102723809 GC14M064872 PIR49393
GH14G065312 0.5 dbSUPER 14.5 -938.2 -938204 1.2 ZNF555 IKZF1 ZNF781 ZNF518A TEX21P ENSG00000214770 ENSG00000258824 LINC02324 ENSG00000258760 GC14M065292
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TEX21P on UCSC Golden Path with GeneCards custom track

Genomic Location for TEX21P Gene

Chromosome:
14
Start:
64,345,473 bp from pter
End:
64,374,666 bp from pter
Size:
29,194 bases
Orientation:
Minus strand

Genomic View for TEX21P Gene

Genes around TEX21P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TEX21P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TEX21P Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for TEX21P Gene

Proteins for TEX21P Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for TEX21P Gene

No Post-translational modifications

No data available for DME Specific Peptides for TEX21P Gene

Domains & Families for TEX21P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TEX21P Gene

Function for TEX21P Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TEX21P Gene

Localization for TEX21P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TEX21P Gene

Pathways & Interactions for TEX21P Gene

SuperPathways for TEX21P Gene

PathCards logo More details on SuperPathways for TEX21P
No Data Available

Interacting Proteins for TEX21P Gene

Gene Ontology (GO) - Biological Process for TEX21P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TEX21P Gene

Drugs & Compounds for TEX21P Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for TEX21P Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for TEX21P Gene

(1) Additional mRNA sequences :
(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TEX21P Gene

Testis expressed 21, pseudogene:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TEX21P Gene

No ASD Table

Relevant External Links for TEX21P Gene

GeneLoc Exon Structure for
TEX21P
ECgene alternative splicing isoforms for
TEX21P

Expression for TEX21P Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TEX21P Gene

mRNA expression in normal human tissues for TEX21P Gene
mRNA expression by GTEx for TEX21P Gene

mRNA differential expression in normal tissues according to GTEx for TEX21P Gene

This gene is overexpressed in Testis (x8.1).

NURSA nuclear receptor signaling pathways regulating expression of TEX21P Gene:

TEX21P

SOURCE GeneReport for Unigene cluster for TEX21P Gene:

Hs.685242
genes like me logo Genes that share expression patterns with TEX21P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TEX21P Gene

Orthologs for TEX21P Gene

Evolution for TEX21P Gene

ENSEMBL:
Gene Tree for TEX21P (if available)
TreeFam:
Gene Tree for TEX21P (if available)

No data available for Orthologs for TEX21P Gene

Paralogs for TEX21P Gene

No data available for Paralogs for TEX21P Gene

Variants for TEX21P Gene

Sequence variations from dbSNP and Humsavar for TEX21P Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type
rs1001690248 -- 64,346,128(+) TAGGC(A/G)TGGGT nc-transcript-variant
rs1001722719 -- 64,346,621(+) TCAAT(A/G)ACTAT intron-variant
rs1003364030 -- 64,347,829(+) ACCAC(A/G)TCCAC upstream-variant-2KB
rs1003398529 -- 64,348,110(+) CCCAG(A/C)ATTTT upstream-variant-2KB
rs1004585545 -- 64,348,168(+) GCCAA(C/T)ATGAT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for TEX21P Gene

Variant ID Type Subtype PubMed ID
esv2748779 CNV deletion 23290073
nsv84862 CNV deletion 16902084

Relevant External Links for TEX21P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TEX21P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for TEX21P Gene

Disorders for TEX21P Gene

Relevant External Links for TEX21P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TEX21P

No disorders were found for TEX21P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TEX21P Gene

Publications for TEX21P Gene

  1. Identification and analysis of unitary pseudogenes: historic and contemporary gene losses in humans and other primates. (PMID: 20210993) Zhang Z.D. … Gerstein M. (Genome Biol. 2010) 2 3 64

Products for TEX21P Gene

Sources for TEX21P Gene

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