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Aliases for TEX21P Gene

Aliases for TEX21P Gene

  • Testis Expressed 21, Pseudogene 2 3

External Ids for TEX21P Gene

Summaries for TEX21P Gene

GeneCards Summary for TEX21P Gene

TEX21P (Testis Expressed 21, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TEX21P Gene

Genomics for TEX21P Gene

Genomic Location for TEX21P Gene

Start:
64,345,473 bp from pter
End:
64,374,666 bp from pter
Size:
29,194 bases
Orientation:
Minus strand

Genomic View for TEX21P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TEX21P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TEX21P Gene

No data available for Regulatory Elements for TEX21P Gene

Proteins for TEX21P Gene

Post-translational modifications for TEX21P Gene

No Post-translational modifications

No data available for DME Specific Peptides for TEX21P Gene

Domains for TEX21P Gene

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for TEX21P Gene

Function for TEX21P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TEX21P Gene

Localization for TEX21P Gene

No data available for Gene Ontology (GO) - Cellular Components for TEX21P Gene

Pathways for TEX21P Gene

SuperPathways for TEX21P Gene

No Data Available

Interacting Proteins for TEX21P Gene

Gene Ontology (GO) - Biological Process for TEX21P Gene

None

No data available for Pathways by source for TEX21P Gene

Transcripts for TEX21P Gene

mRNA/cDNA for TEX21P Gene

(1) Additional mRNA sequences :
(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TEX21P Gene

Testis expressed 21, pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TEX21P Gene

No ASD Table

Relevant External Links for TEX21P Gene

GeneLoc Exon Structure for
TEX21P
ECgene alternative splicing isoforms for
TEX21P

Expression for TEX21P Gene

mRNA expression in normal human tissues for TEX21P Gene

mRNA differential expression in normal tissues according to GTEx for TEX21P Gene

This gene is overexpressed in Testis (8.1).

SOURCE GeneReport for Unigene cluster for TEX21P Gene Hs.685242

genes like me logo Genes that share expressions with TEX21P: view

Orthologs for TEX21P Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for TEX21P Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Tex21 16
Species with no ortholog for TEX21P:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TEX21P Gene

ENSEMBL:
Gene Tree for TEX21P (if available)
TreeFam:
Gene Tree for TEX21P (if available)

Paralogs for TEX21P Gene

No data available for Paralogs for TEX21P Gene

Variants for TEX21P Gene

Sequence variations from dbSNP and Humsavar for TEX21P Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type MAF
rs944051 -- 64,347,740(-) GGACT(A/G)AGCAT upstream-variant-2KB
rs1256112 -- 64,347,593(-) TCAGA(A/G)ACAGC nc-transcript-variant
rs3020438 -- 64,348,224(-) AGGCA(C/T)CTGCC upstream-variant-2KB
rs3020439 -- 64,347,225(-) TGAGA(C/T)GGAGT intron-variant
rs3020440 -- 64,347,224(-) GAGAT(A/G)GAGTC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for TEX21P Gene

Variant ID Type Subtype PubMed ID
esv2748779 CNV Deletion 23290073
nsv902019 CNV Gain 21882294
nsv84862 CNV Loss 16902084

Relevant External Links for TEX21P Gene

HapMap Linkage Disequilibrium report
TEX21P

Disorders for TEX21P Gene

No disorders were found for TEX21P Gene.

No data available for UniProtKB/Swiss-Prot for TEX21P Gene

Publications for TEX21P Gene

  1. Identification and analysis of unitary pseudogenes: historic and contemporary gene losses in humans and other primates. (PMID: 20210993) Zhang Z.D. … Gerstein M. (Genome Biol. 2010) 2 3

Products for TEX21P Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate TEX21P
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for TEX21P
    • Block miRNA regulation of TEX21P using miScript Target Protectors

    Sources for TEX21P Gene

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