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TEX21P Gene(Pseudogene)

Testis Expressed 21, Pseudogene

GCID:
GC14M064345
GIFtS:
16
Genes Participants
UDN Logo

Aliases for TEX21P Gene

Aliases for TEX21P Gene

  • Testis Expressed 21, Pseudogene 2 3 5

External Ids for TEX21P Gene

Previous GeneCards Identifiers for TEX21P Gene

  • GC14M064813
  • GC14M044984

Summaries for TEX21P Gene

GeneCards Summary for TEX21P Gene

TEX21P (Testis Expressed 21, Pseudogene) is a Pseudogene.

Additional gene information for TEX21P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TEX21P Gene

Genomics for TEX21P Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for TEX21P Gene

Promoters and enhancers for TEX21P Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH14I064386 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 550.8 -0.5 -539 3.4 HDGF PKNOX1 MLX ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 SLC30A9 MTHFD1 TEX21P LOC102723809 AKAP5 SYNE2 ENSG00000272909
GH14I064499 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 10.2 -116.8 -116764 9.9 HDGF PKNOX1 CLOCK FOXA2 ARNT ARID4B SIN3A DMAP1 YBX1 ZNF2 ZBTB1 ZBTB25 LOC102723809 PPP1R36 AKAP5 HSPA2 TEX21P SYNE2 ENSG00000214770
GH14I063675 Enhancer 1.2 Ensembl ENCODE 11.4 +710.5 710496 3.5 PKNOX1 CLOCK NEUROD1 FEZF1 ZNF2 BRCA1 ZNF213 E2F8 KLF7 FOS ENSG00000200693 ENSG00000214770 SGPP1 TEX21P RNU7-116P ZBTB25 SYNE2 ENSG00000202182 WDR89 GC14P063658
GH14I065361 Enhancer 0.7 Ensembl ENCODE 14.5 -974.1 -974148 1 ZNF555 ZBTB11 SCRT2 ZC3H11A ZNF781 ZNF518A ZNF697 TEX21P ZBTB25 ZBTB1 ENSG00000258824 LINC02324 LOC105370537 GC14M065336
GH14I065312 Enhancer 0.5 dbSUPER 14.5 -924.9 -924884 1.2 ZNF555 IKZF1 ZC3H11A ZBTB33 ZNF781 ZNF518A TEX21P ENSG00000214770 ZBTB25 ZBTB1 ENSG00000258824 LINC02324 ENSG00000258760 GC14M065292
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TEX21P on UCSC Golden Path with GeneCards custom track

Genomic Locations for TEX21P Gene

Genomic Locations for TEX21P Gene
chr14:64,341,673-64,387,986
(GRCh38/hg38)
Size:
46,314 bases
Orientation:
Minus strand
chr14:64,812,191-64,841,384
(GRCh37/hg19)

Genomic View for TEX21P Gene

Genes around TEX21P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TEX21P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TEX21P Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for TEX21P Gene

Proteins for TEX21P Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for TEX21P Gene

No Post-translational modifications

No data available for DME Specific Peptides for TEX21P Gene

Domains & Families for TEX21P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TEX21P Gene

Function for TEX21P Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TEX21P Gene

Localization for TEX21P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TEX21P Gene

Pathways & Interactions for TEX21P Gene

SuperPathways for TEX21P Gene

PathCards logo More details on SuperPathways for TEX21P
No Data Available

Interacting Proteins for TEX21P Gene

Gene Ontology (GO) - Biological Process for TEX21P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TEX21P Gene

Drugs & Compounds for TEX21P Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for TEX21P Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for TEX21P Gene

(1) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:
(6) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TEX21P Gene

Testis expressed 21, pseudogene:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TEX21P Gene

No ASD Table

Relevant External Links for TEX21P Gene

GeneLoc Exon Structure for
TEX21P
ECgene alternative splicing isoforms for
TEX21P

Expression for TEX21P Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TEX21P Gene

mRNA expression in normal human tissues for TEX21P Gene
mRNA expression by GTEx for TEX21P Gene

mRNA differential expression in normal tissues according to GTEx for TEX21P Gene

This gene is overexpressed in Testis (x8.1).

NURSA nuclear receptor signaling pathways regulating expression of TEX21P Gene:

TEX21P

SOURCE GeneReport for Unigene cluster for TEX21P Gene:

Hs.685242
genes like me logo Genes that share expression patterns with TEX21P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TEX21P Gene

Orthologs for TEX21P Gene

Evolution for TEX21P Gene

ENSEMBL:
Gene Tree for TEX21P (if available)
TreeFam:
Gene Tree for TEX21P (if available)

No data available for Orthologs for TEX21P Gene

Paralogs for TEX21P Gene

No data available for Paralogs for TEX21P Gene

Variants for TEX21P Gene

Sequence variations from dbSNP and Humsavar for TEX21P Gene

SNP ID Clin Chr 14 pos Variation AA Info Type
rs1001690248 -- 64,346,128(-) G/A non_coding_transcript_variant
rs1001722719 -- 64,346,621(-) A/G intron_variant
rs1003364030 -- 64,347,829(-) A/G upstream_transcript_variant
rs1003398529 -- 64,348,110(-) C/A upstream_transcript_variant
rs1004585545 -- 64,348,168(-) C/T upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for TEX21P Gene

Variant ID Type Subtype PubMed ID
esv2748779 CNV deletion 23290073
nsv84862 CNV deletion 16902084

Additional Variant Information for TEX21P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TEX21P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for TEX21P Gene

Disorders for TEX21P Gene

Additional Disease Information for TEX21P

ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for TEX21P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TEX21P Gene

Publications for TEX21P Gene

  1. Identification and analysis of unitary pseudogenes: historic and contemporary gene losses in humans and other primates. (PMID: 20210993) Zhang ZD … Gerstein M (Genome biology 2010) 2 3 58

Products for TEX21P Gene

Sources for TEX21P Gene

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