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Aliases for TEX13A Gene

Aliases for TEX13A Gene

  • Testis Expressed 13A 2 3
  • Testis Expressed Sequence 13A 2

External Ids for TEX13A Gene

Summaries for TEX13A Gene

Entrez Gene Summary for TEX13A Gene

  • This gene is similar to a mouse gene that is expressed in the testis. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Mar 2014]

GeneCards Summary for TEX13A Gene

TEX13A (Testis Expressed 13A) is a Protein Coding gene.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TEX13A Gene

Genomics for TEX13A Gene

Genomic Location for TEX13A Gene

Start:
105,218,929 bp from pter
End:
105,220,674 bp from pter
Size:
1,746 bases
Orientation:
Minus strand

Genomic View for TEX13A Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TEX13A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TEX13A Gene

Regulatory Elements for TEX13A Gene

Proteins for TEX13A Gene

  • Protein details for TEX13A Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9BXU3-TX13A_HUMAN
    Recommended name:
    Testis-expressed sequence 13A protein
    Protein Accession:
    Q9BXU3
    Secondary Accessions:
    • B1B1G8
    • Q32NB6

    Protein attributes for TEX13A Gene

    Size:
    409 amino acids
    Molecular mass:
    45583 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=CAI41996.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};

neXtProt entry for TEX13A Gene

Proteomics data for TEX13A Gene at MOPED

Post-translational modifications for TEX13A Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for TEX13A Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for TEX13A Gene

Domains for TEX13A Gene

Protein Domains for TEX13A Gene

InterPro:
Blocks:
ProtoNet:

Suggested Antigen Peptide Sequences for TEX13A Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q9BXU3

UniProtKB/Swiss-Prot:

TX13A_HUMAN
Similarity:
  • Contains 1 RanBP2-type zinc finger.:
    • Q9BXU3
genes like me logo Genes that share domains with TEX13A: view

No data available for Gene Families for TEX13A Gene

Function for TEX13A Gene

Gene Ontology (GO) - Molecular Function for TEX13A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
GO:0008270 zinc ion binding IEA --
genes like me logo Genes that share ontologies with TEX13A: view

miRNA for TEX13A Gene

miRTarBase miRNAs that target TEX13A

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for TEX13A Gene

Localization for TEX13A Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for TEX13A Gene COMPARTMENTS Subcellular localization image for TEX13A gene
Compartment Confidence
nucleus 3
cytosol 2

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for TEX13A Gene

Pathways for TEX13A Gene

SuperPathways for TEX13A Gene

No Data Available

Interacting Proteins for TEX13A Gene

Selected Interacting proteins: Q9BXU3-TX13A_HUMAN for TEX13A Gene via UniProtKB

Symbol External ID(s) Details
TBC1D10A

Gene Ontology (GO) - Biological Process for TEX13A Gene

None

No data available for Pathways by source for TEX13A Gene

Transcripts for TEX13A Gene

mRNA/cDNA for TEX13A Gene

(2) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(10) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TEX13A Gene

Testis expressed 13A:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TEX13A Gene

No ASD Table

Relevant External Links for TEX13A Gene

GeneLoc Exon Structure for
TEX13A
ECgene alternative splicing isoforms for
TEX13A

Expression for TEX13A Gene

mRNA expression in normal human tissues for TEX13A Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for TEX13A Gene

This gene is overexpressed in Testis (53.0).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for TEX13A Gene

SOURCE GeneReport for Unigene cluster for TEX13A Gene Hs.567543

mRNA Expression by UniProt/SwissProt for TEX13A Gene

Q9BXU3-TX13A_HUMAN
Tissue specificity: Testis specific
genes like me logo Genes that share expressions with TEX13A: view

Orthologs for TEX13A Gene

This gene was present in the common ancestor of mammals.

Orthologs for TEX13A Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia TEX13A 35
  • 99.02 (n)
  • 98.04 (a)
cow
(Bos Taurus)
Mammalia TEX13B 35
  • 72.84 (n)
  • 58.58 (a)
dog
(Canis familiaris)
Mammalia LOC492058 35
  • 73.76 (n)
  • 62.26 (a)
mouse
(Mus musculus)
Mammalia Tex13a 35
  • 65.32 (n)
  • 53.69 (a)
Tex13a 16
rat
(Rattus norvegicus)
Mammalia Tex13a 35
  • 62.37 (n)
  • 49.19 (a)
Species with no ortholog for TEX13A:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TEX13A Gene

ENSEMBL:
Gene Tree for TEX13A (if available)
TreeFam:
Gene Tree for TEX13A (if available)

Paralogs for TEX13A Gene

Selected SIMAP similar genes for TEX13A Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with TEX13A: view

No data available for Paralogs for TEX13A Gene

Variants for TEX13A Gene

Relevant External Links for TEX13A Gene

HapMap Linkage Disequilibrium report
TEX13A
Locus Specific Mutation Databases (LSDB)
TEX13A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for TEX13A Gene

Disorders for TEX13A Gene

No disorders were found for TEX13A Gene.

No data available for UniProtKB/Swiss-Prot for TEX13A Gene

Publications for TEX13A Gene

  1. An abundance of X-linked genes expressed in spermatogonia. (PMID: 11279525) Wang P.J. … Page D.C. (Nat. Genet. 2001) 2 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  3. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3
  4. The DNA sequence of the human X chromosome. (PMID: 15772651) Ross M.T. … Bentley D.R. (Nature 2005) 4
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for TEX13A Gene

  • antibodies-online proteins for TEX13A
  • antibodies-online antibodies for TEX13A
  • antibodies-online kits for TEX13A

Sources for TEX13A Gene

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