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TEX101 Gene

protein-coding   GIFtS: 45
GCID: GC19P043892

Testis Expressed 101

(Previous name: testis expressed sequence 101)
  See related diseases
at  

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
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Aliases
Testis Expressed 1011 2     CT1312
SGRG2 3 5     GTPR8672
Testis Expressed Sequence 1011 2     NYD-SP82
Cancer/Testis Antigen 1311 2     PRO18842
Spermatogenesis Associated 441 2     SPATA442
Cell Surface Receptor NYD-SP82 3     Testis-Expressed Protein 1012
Scleroderma-Associated Autoantigen2 3     Testis-Expressed Sequence 101 Protein2
Spermatogenesis-Related Gene Protein2 3     Testis-Specific Protein TES101RP2
TES101RP2 5     

External Ids:    HGNC: 307221   Entrez Gene: 836392   Ensembl: ENSG000001311267   OMIM: 6126655   UniProtKB: Q9BY143   

Export aliases for TEX101 gene to outside databases

Previous GC identifers: GC00U920630 GC19P048585 GC19P040326


(According to Entrez Gene, GeneCards, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
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GeneCards Summary for TEX101 Gene:
TEX101 (testis expressed 101) is a protein-coding gene. Diseases associated with TEX101 include scleroderma, and chronic myeloid leukemia. An important paralog of this gene is CD177.

UniProtKB/Swiss-Prot: TX101_HUMAN, Q9BY14
Function: May play a role in signal transduction and promote protein tyrosine phosphorylation (By similarity)




(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 75), Regulatory elements and Epigenetics data according to QIAGEN, and/or SwitchGear Genomics)
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RefSeq DNA sequence:
NC_000019.10  NT_011109.17  NC_018930.2  
Regulatory elements:
   Regulatory transcription factor binding sites in the TEX101 gene promoter:
         SRF   p53   GATA-3   GCNF   SRF (504 AA)   FOXD1   GCNF-1   GCNF-2   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidTEX101 promoter sequence
   Search Chromatin IP Primers for TEX101

Epigenetics:
DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat TEX101


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 19q13.31   Ensembl cytogenetic band:  19q13.31   HGNC cytogenetic band: 19q13.31

TEX101 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
TEX101 gene location

GeneLoc information about chromosome 19         GeneLoc Exon Structure

GeneLoc location for GC19P043892:  view genomic region     (about GC identifiers)

Start:
43,892,763 bp from pter      End:
43,922,767 bp from pter
Size:
30,005 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, 2neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Cloud-Clone Corp.,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Cloud-Clone Corp., Antibodies by EMD Millipore, R&D Systems, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, LSBio, Abcam, Cloud-Clone Corp, and/or others.)
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UniProtKB/Swiss-Prot: TX101_HUMAN, Q9BY14 (See protein sequence)
Recommended Name: Testis-expressed sequence 101 protein precursor  
Size: 249 amino acids; 26667 Da
Subunit: Interacts with VAMP3 (By similarity)
Secondary accessions: Q7L5R2 Q9BPY7
Alternative splicing: 2 isoforms:  Q9BY14-1   Q9BY14-2   (Variant in position: 4:R->M (in dbSNP:rs17849541))

Explore the universe of human proteins at neXtProt for TEX101: NX_Q9BY14

Explore proteomics data for TEX101 at MOPED

Post-translational modifications: 

  • N-glycosylated (By similarity)1
  • Glycosylation2 at Asn45, Asn159
  • Modification sites at PhosphoSitePlus

  • See TEX101 Protein Expression from SPIRE MOPED, PaxDB, and MaxQB

    REFSEQ proteins (2 alternative transcripts): 
    NP_001123483.1  NP_113639.4  

    ENSEMBL proteins: 
     ENSP00000472308   ENSP00000472769   ENSP00000253435  

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    (According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
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    1 InterPro protein domain:
     IPR001526 LY6_UPAR

    Graphical View of Domain Structure for InterPro Entry Q9BY14

    ProtoNet protein and cluster: Q9BY14

    1 Blocks protein domain: IPB001526 CD59 antigen

    UniProtKB/Swiss-Prot: TX101_HUMAN, Q9BY14
    Similarity: Contains 1 UPAR/Ly6 domain


    TEX101 for domains           About GeneDecksing


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory, genOway,
    transcription factor targeting from QIAGEN and/or HOMER, miRNA Gene Targets from miRTarBase, shRNA from OriGene, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, SwitchGear Genomics, Gene Editing from DNA2.0, Clones from OriGene, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, ESI BIO, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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    Molecular Function:

         UniProtKB/Swiss-Prot Summary: TX101_HUMAN, Q9BY14
    Function: May play a role in signal transduction and promote protein tyrosine phosphorylation (By similarity)

    Phenotypes:
         2 MGI mutant phenotypes (inferred from 1 allele(MGI details for Tex101):

     behavior/neurological  reproductive system 

    TEX101 for phenotypes           About GeneDecksing

    Animal Models:
         MGI mouse knock-out Tex101tm1Osb for TEX101

       inGenious Targeting Laboratory: Let us create your new Knockout/Knockin mouse model for TEX101
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       genOway customized Knockin model: humanization, point mutation, expression monitoring, etc. for TEX101

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    miRTarBase miRNAs that target TEX101:
    hsa-mir-335-5p (MIRT018724)

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    1 qRT-PCR Assays for microRNA that regulate TEX101:
    hsa-miR-3671
    SwitchGear 3'UTR luciferase reporter plasmidTEX101 3' UTR sequence
    Inhib. RNA
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    (According to UniProtKB, COMPARTMENTS Subcellular localization database, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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    Subcellular locations from UniProtKB/Swiss-Prot
    TX101_HUMAN, Q9BY14: Cell membrane; Lipid-anchor, GPI-anchor (By similarity). Note=Associated with lipid rafts
    (By similarity)
    Subcellular locations from COMPARTMENTS: 

    CompartmentConfidence
    plasma membrane5
    cytosol1

    Gene Ontology (GO): 3 cellular component terms:    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0002080acrosomal membrane IEA--
    GO:0005886plasma membrane IEA--
    GO:0031225anchored component of membrane IEA--

    TEX101 for ontologies           About GeneDecksing


    (SuperPaths according to PathCards, Pathways according to R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to QIAGEN, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene).
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        Custom Pathway & Disease-focused RT2 Profiler PCR Arrays for TEX101
    Interactions:

        Search GeneGlobe Interaction Network for TEX101

    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience, ApexBio, HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB)
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    Browse Small Molecules at EMD Millipore
       Browse drugs & compounds from Enzo Life Sciences
      Browse compounds at ApexBio 

    Browse Tocris compounds for TEX101 (TX101)



    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN, SwitchGear Genomics,
    Tagged/untagged cDNA clones from OriGene, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, and/or QIAGEN )
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    REFSEQ mRNAs for TEX101 gene (2 alternative transcripts): 
    NM_001130011.1  NM_031451.4  

    Unigene Cluster for TEX101:

    Testis expressed 101
    Hs.97978  [show with all ESTs]
    Unigene Representative Sequence: AF241268
    4 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000602198 ENST00000601707 ENST00000598265 ENST00000253435(uc002owk.3 uc010xwo.2)

    miRNA
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    1 qRT-PCR Assays for microRNA that regulate TEX101:
    hsa-miR-3671
    SwitchGear 3'UTR luciferase reporter plasmidTEX101 3' UTR sequence
    Inhib. RNA
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    GenScript: all cDNA clones in your preferred vector (see all 2): TEX101 (NM_001130011)
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    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat TEX101
    Primer
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    OriGene qPCR primer pairs and template standards for TEX101
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    Pre-validated RT2 qPCR Primer Assay in human, mouse, rat TEX101
      QuantiTect SYBR Green Assays in human, mouse, rat TEX101
      QuantiFast Probe-based Assays in human, mouse, rat TEX101

    Additional mRNA sequence: 

    AF241268.1 AF353396.1 AY014285.1 AY359077.1 BC001861.2 

    4 DOTS entries:

    DT.110914  DT.110915  DT.100744616  DT.95302089 

    Selected AceView cDNA sequences (see all 43):

    AA405709 AA960901 AA953495 BM674514 AY359077 BC001861 BM716836 AA417291 
    CD360001 BI829445 BI832360 BM553361 AI005430 BM701462 BI828523 AW469755 
    BM559583 AA405957 AA416555 AA971007 AW665972 BM559890 AY014285 BI464375 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MaxQB, plus additional links to SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from QIAGEN, Primers from OriGene, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
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    TEX101 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS <intensity>2/3
    CGAP TAG: ACTGTGGAAG
    TEX101 Expression
    About this image


    TEX101 expression in embryonic tissues and stem cells    About this table
    Data from LifeMap, the Embryonic Development and Stem Cells Database
     selected tissues (see all 3) fully expand
     
     Ovary (Reproductive System)
             XX Germ Cells Ovigerous Cord
     
     Gonad
             XX Germ Cells Ovigerous Cord
     
     Testis (Reproductive System)
    TEX101 Protein expression data from MOPED1, PaxDb2 and MaxQB3    About this image

    TEX101 Protein Expression

    SOURCE GeneReport for Unigene cluster: Hs.97978

    UniProtKB/Swiss-Prot: TX101_HUMAN, Q9BY14
    Tissue specificity: Detected in testis and spermatogonia. Not detected in spermatocytes. Detected in blood
    leukocytes

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    QuantiFast Probe-based Assays in human, mouse, rat TEX101
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for TEX101

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
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    This gene was present in the common ancestor of eukaryotes.

    Orthologs for TEX101 gene from Selected species (see all 7)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Tex1011 , 5 testis expressed gene 1011, 5 67.1(n)1
    55.84(a)1
      7 (12.13 cM)5
    567461  NM_019981.21  NP_064365.11 
     246680125 
    Alicante grape
    (Vitis vinifera)
    eudicotyledons Vvi.74032 Vitis vinifera transcribed sequences 78.64(n)    BQ793166.1 


    ENSEMBL Gene Tree for TEX101 (if available)
    TreeFam Gene Tree for TEX101 (if available)

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
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    Paralogs for TEX101 gene
    CD1772  LYPD42  
    1 SIMAP similar gene for TEX101 using alignment to 1 protein entry:     TX101_HUMAN:
    CD177

    TEX101 for paralogs           About GeneDecksing


    1 Pseudogenes.org Pseudogene for TEX101
    PGOHUM00000241905


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD), the Human Cytochrome P450 Allele Nomenclature Database, and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers, Cancer Mutation PCR Arrays and Assays, and Copy Number PCR Arrays from QIAGEN)
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    Selected SNPs for TEX101 (see all 758)    About this table    
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 19 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1388259521,2
    C--43890823(+) TTGTA-/TTTTTT 1 -- us2k10--------
    rs1382046441,2
    --43891012(+) AAGTGG/TAATAT 1 -- us2k10--------
    rs1414538781,2
    --43891282(+) CTATCA/GCAAGT 1 -- us2k10--------
    rs343582081,2
    C--43891298(+) TAATT-/AAAAAA 1 -- us2k12Minor allele frequency- A:0.25NA 4
    rs730398911,2
    C--43891300(+) ATTAAG/AAAAAA 1 -- us2k11Minor allele frequency- A:0.50CSA 2
    rs124623901,2
    C,H--43891352(+) AATGTA/TGATTT 1 -- us2k14Minor allele frequency- T:0.00NS EA 418
    rs1865262011,2
    --43891373(+) ATTGCA/GGAGAC 1 -- us2k10--------
    rs1429601851,2
    --43891621(+) AGGGCA/GCGGTG 1 -- us2k10--------
    rs1897971101,2
    --43891847(+) TCCTCC/TGGATT 1 -- us2k10--------
    rs129811631,2
    C,F,A--43891848(+) CCTCCG/AGATTC 1 -- us2k15Minor allele frequency- A:0.18NA WA 128

    HapMap Linkage Disequilibrium report for TEX101 (43892763 - 43922767 bp)

    Structural Variations
         Database of Genomic Variants (DGV) 6 variations for TEX101:    About this table    
    Variant IDTypeSubtypePubMed ID
    esv1342569CNV Deletion17803354
    nsv509744CNV Insertion20534489
    nsv520852CNV Gain+Loss19592680
    essv22369CNV CNV17122850
    nsv469666CNV Complex16826518
    dgv1087e1CNV Complex17122850

    Site Specific Mutation Identification with PCR Assays
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    DNA2.0 Custom Variant and Variant Library Synthesis for TEX101

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
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    OMIM gene information: 612665    OMIM disorders: --

    8 diseases for TEX101:    
    About MalaCards
    scleroderma    chronic myeloid leukemia    male infertility    basal cell carcinoma
    infertility    nasopharyngitis    myeloid leukemia    leukemia


    TEX101 for disorders           About GeneDecksing

    Genetic Association Database (GAD): TEX101

    Export disorders for TEX101 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
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    PubMed articles for TEX101 gene, integrated from 10 sources (see all 12):
    (articles sorted by number of sources associating them with TEX101)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. A novel spermatogenesis-specific uPAR gene expressed in human and mouse testis. (PubMed id 16516155)1, 2, 3 Teng X.... Kong X. (Biochem. Biophys. Res. Commun. 2006)
    2. TEX101 is shed from the surface of sperm located in the caput epididymidis of the mouse. (PubMed id 16388701)1, 3 Takayama T....Takizawa T. (Zygote 2005)
    3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S.... Malek J. (Genome Res. 2004)
    4. The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PubMed id 12975309)1, 2 Clark H.F.... Gray A.M. (Genome Res. 2003)
    5. Charting the landscape of tandem BRCT domain-mediated protein interactions. (PubMed id 22990118)1 Woods N.T....Monteiro A.N. (Sci Signal 2012)
    6. Expression of testis-specific genes, TEX101 and ODF4, in chronic myeloid leukemia and evaluation of TEX101 immunogenicity. (PubMed id 22588436)1 Ghafouri-Fard S....Yazarloo F. (Ann Saudi Med 2012)
    7. Preparation of anti-NYD-SP8 rabbit polyclonal antibody and its application in the analysis of NYD-SP8 expression in nasopharyngeal carcinoma cell lines and clinical tissues. (PubMed id 22158499)1 Yang L.L....Xia Y.F. (Tumori 2011)
    8. Verification of male infertility biomarkers in seminal plasma by multiplex selected reaction monitoring assay. (PubMed id 21933954)1 Drabovich A.P....Diamandis E.P. (amp 2011)
    9. Elevated expression levels of testis-specific genes TEX101 and SPATA19 in basal cell carcinoma and their correlation with clinical and pathological features. (PubMed id 19886887)1 Ghafouri-Fard S....Modarressi M.H. (Br. J. Dermatol. 2010)
    10. A sperm GPI-anchored protein elicits sperm-cumulus cross-talk leading to the acrosome reaction. (PubMed id 19153666)1 Yin L....Chan H.C. (Cell. Mol. Life Sci. 2009)

    (in PubMed, OMIM, and NCBI Bookshelf)
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     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
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    Entrez Gene: 83639 HGNC: 30722 AceView: MGC4766 Ensembl:ENSG00000131126 euGenes: HUgn83639
    ECgene: TEX101 H-InvDB: TEX101

    (According to HUGE)
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      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL, and/or others, e.g. Wikipedia and GeneReviews, via UniProtKB/Swiss-Prot)
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    NameDescription
    PharmGKB entry for TEX101 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
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    Patent Information for TEX101 gene:
    Search GeneIP for patents involving TEX101

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Cloud-Clone Corp., Thermo Fisher Scientific, LSBio, Gene Editing from DNA2.0. Clones from OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, and ESI BIO, PCR Arrays from QIAGEN, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, Enzo Life Sciences, and/or ApexBio, In Situ Hybridization Assays from
    Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory, genOway)
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    GeneCards Homepage - Last full update: 7 May 2014 - Incrementals: 9 May 2014 , 2 Jun 2014 , 26 Jun 2014 , 30 Jun 2014

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