Free for academic non-profit institutions. Other users need a Commercial license

Aliases for TESMIN Gene

Aliases for TESMIN Gene

  • Testis Expressed Metallothionein Like Protein 2 3 5
  • Metallothionein-Like 5, Testis-Specific (Tesmin) 2 3
  • Testis-Specific Metallothionein-Like Protein 3 4
  • CXC Domain Containing 2 2 3
  • MTL5 3 4
  • Metallothionein-Like 5, Testis-Specific 4
  • CXCDC2 3
  • Tesmin 3
  • MTLT 3

External Ids for TESMIN Gene

Previous HGNC Symbols for TESMIN Gene

  • MTL5

Summaries for TESMIN Gene

Entrez Gene Summary for TESMIN Gene

  • Metallothionein proteins are highly conserved low-molecular-weight cysteine-rich proteins that are induced by and bind to heavy metal ions and have no enzymatic activity. They may play a central role in the regulation of cell growth and differentiation and are involved in spermatogenesis. This gene encodes a metallothionein-like protein which has been shown to be expressed differentially in mouse testis and ovary. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

GeneCards Summary for TESMIN Gene

TESMIN (Testis Expressed Metallothionein Like Protein) is a Protein Coding gene. An important paralog of this gene is LIN54.

UniProtKB/Swiss-Prot for TESMIN Gene

  • May have a role in spermatogenesis.

No data available for CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TESMIN Gene

Genomics for TESMIN Gene

Regulatory Elements for TESMIN Gene

Enhancers for TESMIN Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11G068854 1.9 FANTOM5 Ensembl ENCODE dbSUPER 12.3 -104.9 -104945 4.5 FOXA2 MLX ARID4B DMAP1 YY1 SLC30A9 SP5 ZHX2 MXD4 ZNF592 IGHMBP2 LOC105369364 TESMIN MRPL21 CPT1A
GH11G068693 0.8 ENCODE 22.8 +56.9 56902 1.5 HDGF BRD4 ESRRA MXI1 SAP130 TAF1 ARID4B SIN3A ZNF335 GATA3 TESMIN GAL MRPL21 IGHMBP2
GH11G068658 0.9 ENCODE 16.9 +92.3 92325 1.4 NFIB ZSCAN4 INSM2 SIN3A FEZF1 ZBTB40 ZNF2 RAD21 ZNF121 GLIS2 TESMIN GAL PPP6R3 ENSG00000260808
GH11G068748 1 ENCODE 14.7 +1.0 1013 3.2 PKNOX1 SIN3A ETS1 GLIS2 CBX5 GATA2 FOS KDM4B SP3 ZNF592 TESMIN GAL
GH11G068689 0.7 ENCODE 21 +61.4 61437 1.0 ZNF263 BCOR SMARCA5 PTBP1 ZMYM3 NFXL1 TEAD3 ETV4 ADNP GABPB1 TESMIN GAL
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TESMIN on UCSC Golden Path with GeneCards custom track

Promoters for TESMIN Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000041261 164 1201 PKNOX1 SIN3A GLIS2 CBX5 KDM4B SP3 MBD2 CTCF LEF1 KLF1

Genomic Location for TESMIN Gene

Chromosome:
11
Start:
68,706,674 bp from pter
End:
68,751,564 bp from pter
Size:
44,891 bases
Orientation:
Minus strand

Genomic View for TESMIN Gene

Genes around TESMIN on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TESMIN Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TESMIN Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TESMIN Gene

Proteins for TESMIN Gene

  • Protein details for TESMIN Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9Y4I5-MTL5_HUMAN
    Recommended name:
    Tesmin
    Protein Accession:
    Q9Y4I5
    Secondary Accessions:
    • A8K8J3
    • Q4G182
    • Q6P2E2
    • Q8NCC8

    Protein attributes for TESMIN Gene

    Size:
    508 amino acids
    Molecular mass:
    55025 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAD24668.1; Type=Frameshift; Positions=Several; Evidence={ECO:0000305};

    Alternative splice isoforms for TESMIN Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for TESMIN Gene

Post-translational modifications for TESMIN Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for TESMIN Gene

No data available for DME Specific Peptides for TESMIN Gene

Domains & Families for TESMIN Gene

Protein Domains for TESMIN Gene

Suggested Antigen Peptide Sequences for TESMIN Gene

Graphical View of Domain Structure for InterPro Entry

Q9Y4I5

UniProtKB/Swiss-Prot:

MTL5_HUMAN :
  • Belongs to the lin-54 family.
Family:
  • Belongs to the lin-54 family.
genes like me logo Genes that share domains with TESMIN: view

No data available for Gene Families for TESMIN Gene

Function for TESMIN Gene

Molecular function for TESMIN Gene

UniProtKB/Swiss-Prot Function:
May have a role in spermatogenesis.

Gene Ontology (GO) - Molecular Function for TESMIN Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0046872 metal ion binding NAS 10191092
genes like me logo Genes that share ontologies with TESMIN: view
genes like me logo Genes that share phenotypes with TESMIN: view

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for TESMIN Gene

Localization for TESMIN Gene

Subcellular locations from UniProtKB/Swiss-Prot for TESMIN Gene

Cytoplasm. Nucleus. Note=Predominantly localized to the cytoplasm. Translocates from the cytoplasm to the nucleus in the G2/M transition upon treatment with cadmium, cobalt or zinc. {ECO:0000250 UniProtKB:Q9WTJ6}.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for TESMIN gene
Compartment Confidence
nucleus 5
cytosol 3

Gene Ontology (GO) - Cellular Components for TESMIN Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus ISS --
GO:0005737 cytoplasm ISS --
genes like me logo Genes that share ontologies with TESMIN: view

Pathways & Interactions for TESMIN Gene

SuperPathways for TESMIN Gene

No Data Available

Interacting Proteins for TESMIN Gene

Gene Ontology (GO) - Biological Process for TESMIN Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006875 cellular metal ion homeostasis NAS 10191092
GO:0007275 multicellular organism development IEA --
GO:0007283 spermatogenesis NAS 10191092
GO:0010038 response to metal ion NAS 10191092
GO:0030154 cell differentiation IEA --
genes like me logo Genes that share ontologies with TESMIN: view

No data available for Pathways by source and SIGNOR curated interactions for TESMIN Gene

Drugs & Compounds for TESMIN Gene

No Compound Related Data Available

Transcripts for TESMIN Gene

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TESMIN Gene

No ASD Table

Relevant External Links for TESMIN Gene

GeneLoc Exon Structure for
TESMIN
ECgene alternative splicing isoforms for
TESMIN

Expression for TESMIN Gene

NURSA nuclear receptor signaling pathways regulating expression of TESMIN Gene:

TESMIN

mRNA Expression by UniProt/SwissProt for TESMIN Gene:

Q9Y4I5-MTL5_HUMAN
Tissue specificity: Expressed specifically in testis.

Evidence on tissue expression from TISSUES for TESMIN Gene

  • Nervous system(4.2)

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and Phenotype-based relationships between genes and organs from Gene ORGANizer for TESMIN Gene

Orthologs for TESMIN Gene

This gene was present in the common ancestor of animals.

Orthologs for TESMIN Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia MTL5 34 35
  • 99.21 (n)
cow
(Bos Taurus)
Mammalia MTL5 34
  • 84.48 (n)
dog
(Canis familiaris)
Mammalia MTL5 34 35
  • 83.66 (n)
mouse
(Mus musculus)
Mammalia Mtl5 34 35
  • 73.35 (n)
Tesmin 16
rat
(Rattus norvegicus)
Mammalia Mtl5 34
  • 72.86 (n)
platypus
(Ornithorhynchus anatinus)
Mammalia MTL5 35
  • 69 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia MTL5 35
  • 47 (a)
OneToOne
chicken
(Gallus gallus)
Aves MTL5 34 35
  • 65.4 (n)
lizard
(Anolis carolinensis)
Reptilia MTL5 35
  • 61 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii MTL5 35
  • 24 (a)
OneToOne
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.5658 34
fruit fly
(Drosophila melanogaster)
Insecta mip120 35
  • 11 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea lin-54 35
  • 23 (a)
OneToMany
Species where no ortholog for TESMIN was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for TESMIN Gene

ENSEMBL:
Gene Tree for TESMIN (if available)
TreeFam:
Gene Tree for TESMIN (if available)

Paralogs for TESMIN Gene

Paralogs for TESMIN Gene

genes like me logo Genes that share paralogs with TESMIN: view

Variants for TESMIN Gene

Sequence variations from dbSNP and Humsavar for TESMIN Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs1000026241 -- 68,708,204(+) GGGAG(C/G)CTGGT intron-variant, utr-variant-3-prime
rs1000035724 -- 68,745,480(+) GAGCA(A/G)AAGAG intron-variant
rs1000040954 -- 68,712,052(+) CATCT(C/G)CACCT intron-variant
rs1000100605 -- 68,737,150(+) GAAGT(C/T)ATTTT intron-variant, utr-variant-3-prime
rs1000160741 -- 68,742,889(+) TTTGC(C/T)TTTTT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for TESMIN Gene

Variant ID Type Subtype PubMed ID
dgv670n106 CNV deletion 24896259
esv2744665 CNV deletion 23290073
esv2744666 CNV deletion 23290073
nsv1070468 CNV deletion 25765185
nsv509422 CNV insertion 20534489

Variation tolerance for TESMIN Gene

Residual Variation Intolerance Score: 75.7% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 4.45; 64.14% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for TESMIN Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TESMIN

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for TESMIN Gene

Disorders for TESMIN Gene

Relevant External Links for TESMIN

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TESMIN
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TESMIN

No disorders were found for TESMIN Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TESMIN Gene

Publications for TESMIN Gene

  1. A novel testis-specific metallothionein-like protein, tesmin, is an early marker of male germ cell differentiation. (PMID: 10191092) Sugihara T. … Mitsui Y. (Genomics 1999) 3 4 22 64
  2. Extracellular HIV-1 viral protein R affects astrocytic glyceraldehyde 3-phosphate dehydrogenase activity and neuronal survival. (PMID: 23728617) Ferrucci A. … Wigdahl B. (J. Neurovirol. 2013) 3 64
  3. Lysine acetylation targets protein complexes and co-regulates major cellular functions. (PMID: 19608861) Choudhary C. … Mann M. (Science 2009) 4 64
  4. Transcriptome analysis of human gastric cancer. (PMID: 16341674) Oh J.H. … Kim N.S. (Mamm. Genome 2005) 3 64
  5. Tesmin transcription is regulated differently during male and female meiosis. (PMID: 14648882) Olesen C. … Byskov A.G. (Mol. Reprod. Dev. 2004) 3 64

Products for TESMIN Gene

Sources for TESMIN Gene

Content
Loading form....