TERT Gene
protein-coding GIFtS : 73
GCID: GC05 M001253
telomerase reverse transcriptase
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Aliasesfor TERT gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Telomerase Reverse Transcriptase 1 2 EC 2.7.7.493 8 EST21 2 3 5 DKCA22 TCS11 2 3 5 DKCB42 TP21 2 3 PFBMFT12 TRT1 2 3 HTRT1 HEST23 HEST23 Telomerase Catalytic Subunit2 3 EC 2.7.78 Telomerase-Associated Protein 22 3
Export aliases for TERT gene to outside databases Previous GC identifers: GC05P001643 GC05M001282 GC05M001306
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Summariesfor TERT gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for TERT : Telomerase is a ribonucleoprotein polymerase that maintains telomere ends by addition of the telomere repeat TTAGGG. The enzyme consists of a protein component with reverse transcriptase activity, encoded by this gene, and an RNA component which serves as a template for the telomere repeat. Telomerase expression plays a role in cellular senescence, as it is normally repressed in postnatal somatic cells resulting in progressive shortening of telomeres. Deregulation of telomerase expression in somatic cells may be involved in oncogenesis. Studies in mouse suggest that telomerase also participates in chromosomal repair, since de novo synthesis of telomere repeats may occur at double-stranded breaks. Alternatively spliced variants encoding different isoforms of telomerase reverse transcriptase have been identified; the full-length sequence of some variants has not been determined. Alternative splicing at this locus is thought to be one mechanism of regulation of telomerase activity. (provided by RefSeq, Jul 2008) UniProtKB/Swiss-Prot: TERT_HUMAN, O14746 Function : Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in mosteukaryotes. Active in progenitor and cancer cells. Inactive, or very low activity, in normal somatic cells. Catalytic component of the teleromerase holoenzyme complex whose main activity is the elongation of telomeres by acting as a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. Catalyzes the RNA-dependent extension of 3'-chromosomal termini with the 6-nucleotide telomeric repeat unit, 5'-TTAGGG-3'. The catalytic cycle involves primer binding, primer extension and release of product once the template boundary has been reached or nascent product translocation followed by further extension. More active on substrates containing 2 or 3 telomeric repeats. Telomerase activity is regulated by a number of factors including telomerase complex-associated proteins, chaperones and polypeptide modifiers. Modulates Wnt signaling. Plays important roles in aging and antiapoptosis summary
for TERT : Telomerase is a ribonucleoprotein composed of an internal telomerase RNA template (TERC) and the enzyme,telomerase reverse transcriptase (TERT). Telomerase adds small repeat sequences of DNA (TTAGGG) to the endof chromosomes - multiple repeats of this hexanucleotide sequence over a 5kb span are known as a telomere.During normal cellular replication, telomeres are eroded and thus protect the coding sequences of the DNA.The erosion of telomeric sequences is thought to form the basis of the cellular clock which eventuallysignals for the cell to exit the cell cycle and undergo senescence. Expression of telomerase is low in mostnormal cells although it is thought to be active in embryonic cells and some rapidly dividing cells of theimmune system. Overexpression of telomerase is key component of the transformation process in many malignantcancer cells. Gene Wiki entry for TERT (Telomerase reverse transcriptase)
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Genomic Viewsfor TERT gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000005.9 NC_018916.1 NT_006576.16 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the TERT gene promoter: Egr-3 AP-1 Sp1 p53 STAT3 Other transcription factors Search SABiosciences Chromatin IP Primers for TERT Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat TERT
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 5p15.33 Ensembl cytogenetic band: 5p15.33 HGNC cytogenetic band: 5p15.33 TERT Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 5 GeneLoc Exon Structure
GeneLoc location for GC05M001253: view genomic region
(about GC identifiers )
Start:
1,253,262 bp from pter
End:
1,295,184 bp from pter
Size:
41,923 bases
Orientation:
minus strand
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Proteinsfor TERT gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: TERT_HUMAN, O14746 (See
protein sequence )Recommended Name: Telomerase reverse transcriptase Size : 1132 amino acids; 126997 Da
Subunit : Homodimer; dimerization is required to produce a functional complex. Oligomer; can form oligomers in theabsence of the telomerase RNA template component (TERC). Catalytic subunit of the telomerase holoenzyme complex composed minimally of TERT and TERC. The telomerase complex is composed of TERT, DKC1, WDR79/TCAB1, NOP10, NHP2, GAR1, TEP1, EST1A, POT1 and a telomerase RNA template component (TERC). The molecular chaperone HSP90/P23 complex is required for correct assembly and stabilization of the active telomerase. Interacts directly with HSP90A and PTGES3. Interacts with HSPA1A; the interaction occurs in the absence of TERC and dissociates once the complex has formed. Interacts with RAN; the interaction promotes nuclear export of TERT. Interacts with XPO1. Interacts with PTPN11; the interaction retains TERT in the nucleus. Interacts with NCL (via RRM1 and C-terminal RRM4/Arg/Gly-rich domains); the interaction is important for nucleolar localization of TERT. Interacts with SMARCA4 (via the bromodomain); the interaction regulates Wnt-mediated signaling. Interacts with MCRS1 (isoform MCRS2); the interaction inhibits in vitro telomerase activity. Interacts with PIF1; the interaction has no effect on the elongation activity of TERT. Interacts with PML; the interaction recruits TERT to PML bodies and inhibits telomerase activity. Interacts with GNL3L (By similarity)
Subcellular location : Nucleus, nucleolus. Nucleus, nucleoplasm. Nucleus. Chromosome, telomere. Cytoplasm. Nucleus, PMLbody. Note=Shuttling between nuclear and cytoplasm depends on cell cycle, phosphorylation states, transformation and DNA damage. Diffuse localization in the nucleoplasm. Enriched in nucleoli of certain cell types. Translocated to the cytoplasm via nuclear pores in a CRM1/RAN-dependent manner involving oxidative stress-mediated phosphorylation at Tyr-707. Dephosphorylation at this site by SHP2 retains TERT in the nucleus. Translocated to the nucleus by phosphorylation by AKT
1 PDB 3D structure from and Proteopedia for TERT :2BCK (3D)
 
Secondary accessions : O14783 Q2XS35 Q8N6C3 Q8NG46Alternative splicing : 3 isoforms : O14746-1 O14746-2 O14746-3 (May be produced at very low levels due to a premature stop codon in the mRNA, leading to nonsense-mediated mRNA decay. No experimental confirmation available)Explore the universe of human proteins at neXtProt for TERT: NX_O14746 Post-translational modifications:
Ubiquitinated, leading to proteasomal degradation1
Phosphorylation at Tyr-707 under oxidative stress leads to translocation of TERT to the cytoplasm and reduces its antiapoptotic activity. Dephosphorylated by SHP2/PTPN11 leading to nuclear retention. Phosphorylation by the AKT pathway promotes nuclear location1
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_O14746 4/7 DME Specific Peptides for TERT (O14746 ) (see all 7 )TERT Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins (2 alternative transcripts):
NP_001180305.1 NP_937983.2 ENSEMBL proteins: ENSP00000309572 ENSP00000425003 ENSP00000334346 ENSP00000426042 ENSP00000296820 Reactome Protein details: O14746 Human Recombinant Protein Products: Gene Ontology (GO): 5/8 cellular component terms (GO ID links to tree view) (see all 8 ): About this table
TERT for ontologies About GeneDecksing TERT Antibody Products: Assay Products for TERT:
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Protein
Domains / Familiesfor TERT gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
TERT for domains About GeneDecksing 3 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry O14746 ProtoNet protein and cluster: O14746
1 Blocks protein family : IPB003545 Telomere reverse transcriptase signature UniProtKB/Swiss-Prot: TERT_HUMAN, O14746 Domain : The primer grip sequence in the RT domain is required for telomerase activity and for stable association withshort telomeric primers Domain : The RNA-interacting domain 1 (RD1)/N-terminal extension (NTE) is required for interaction with thepseudoknot-template domain of each of TERC dimers. It contains anchor sites that bind primer nucleotides upstream of the RNA-DNA hybrid and is thus an essential determinant of repeat addition processivity Domain : The RNA-interacting domain 2 (RD2) is essential for both interaction with the CR4-CR5 domain of TERC and forDNA synthesis Similarity : Belongs to the reverse transcriptase family. Telomerase subfamilySimilarity : Contains 1 reverse transcriptase domain
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Functionfor TERT gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: TERT_HUMAN, O14746 Function : Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in mosteukaryotes. Active in progenitor and cancer cells. Inactive, or very low activity, in normal somatic cells. Catalytic component of the teleromerase holoenzyme complex whose main activity is the elongation of telomeres by acting as a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. Catalyzes the RNA-dependent extension of 3'-chromosomal termini with the 6-nucleotide telomeric repeat unit, 5'-TTAGGG-3'. The catalytic cycle involves primer binding, primer extension and release of product once the template boundary has been reached or nascent product translocation followed by further extension. More active on substrates containing 2 or 3 telomeric repeats. Telomerase activity is regulated by a number of factors including telomerase complex-associated proteins, chaperones and polypeptide modifiers. Modulates Wnt signaling. Plays important roles in aging and antiapoptosis Catalytic activity : Deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)Induction : Activated by cytotoxic events and down-regulated during aging. In peripheral T-lymphocytes, induced By CD3and by PMA/ionomycin. Inhibited by herbimycin B
Genatlas biochemistry entry for TERT : telomerase,catalytic subunit,yeast Est2 homolog,100kDa,involved in telomere maintenance,putative up-regulated c-Myc target gene,protein activity deleted in cancer,repressed in normal tissues Enzyme Numbers (IUBMB): EC 2.7.7.49 1 2 EC 2.7.7 2 Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for TERT (see first 1 )NM_001193376 (human cat#: RC231464 ) NM_198253 (human cat#: RC217436 ) NM_009354 (mouse cat#: MR226892 ) NM_053423 (rat cat#: RR210889 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for TERT (see all 2 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 2 ): TERT (NM_198253 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for TERT Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat TERT
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for TERT
Gene Ontology (GO): 5/9 molecular function terms (GO ID links to tree view) (see all 9 ): About this table
TERT for ontologies About GeneDecksing Animal Models: Mouse knock-outs for TERT: Tert tm1Sear Tert tm1Fish Tert tm1Rdp Tert tm1Yjc Tert tm1Leah 14 MGI mutant phenotypes (inferred from 8 alleles ) (MGI details for Tert) :
TERT for phenotypes About GeneDecksing
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Pathways & Interactionsfor TERT gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways  - 5/14 super-pathways (see all 14 ) About this table See pathways by source Super-pathway contained gene-specific pathways 1 Meiotic Synapsis 2 Telomere Extension By Telomerase 3 Cell Cycle 4 Telomere Extension by Telomerase 5 14-3-3 and Regulation of BAD Activity
Pathway sources See GeneCards unified pathways Show all pathways 3 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for TERT 5/7 BioSystems Pathways for TERT (see all 7 ) 5
Reactome Pathways for TERT
TERT for pathways About GeneDecksing Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for TERT STRING Interaction
Network Preview (showing 5 interactants - click image to see 25)5/93 Interacting proteins for TERT (O14746 1 , 2 , 3 ENSP00000309572 4 ) via UniProtKB, MINT, STRING , and/or I2D (see all 93 )About this table Gene Ontology (GO): 5/7 biological process terms (GO ID links to tree view) (see all 7 ): About this table
TERT for ontologies About GeneDecksing
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Drugs & Compoundsfor TERT gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section
TERT for compounds About GeneDecksing
Enzo Life Sciences drugs & compounds for TERT
Compounds for TERT available from Tocris Bioscience About this table Compound Action
CAS
# BIBR 1532 Selective telomerase inhibitor [321674-73-1] Costunolide Inhibitor of human telomerase activity [553-21-9]
2 HMDB Compounds for TERT About this table 10/50 Novoseek chemical compound relationships for TERT gene (see all 50 ) About this table
Compound
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
tin(2+)
59.3
7
12007281 (2), 11494028 (1), 19419704 (1), 18669893 (1)
lipofectamine
36.4
1
17495775 (1)
ganciclovir
26.4
4
19328781 (1), 15312323 (1), 17407070 (1), 19809268 (1)
retinoic acid
25.4
12
12529350 (2), 15236314 (2), 12939463 (1), 14592454 (1) (see all 7 )
ly294002
24.5
2
16093915 (1)
depsipeptide
22.8
2
17610380 (1), 15791453 (1)
oligonucleotide
17.5
5
12838868 (1), 17991312 (1), 12519411 (1)
cisplatin
16.5
4
11877097 (1), 17923759 (1), 19639202 (1), 11384107 (1)
etoposide
14
3
12594176 (1), 11718848 (1)
5-aza-2'deoxycytidine
13.9
2
15805278 (1)
Search CenterWatch for drugs/clinical trials and news about TERT
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Transcriptsfor TERT gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for TERT gene (4 alternative transcripts): NM_001193376.1 NM_198253.2 NM_198254.1 NM_198255.2 Unigene Cluster for TERT:
Telomerase reverse transcriptase Hs.492203 [show with all ESTs ] Unigene Representative Sequence: AF018167 8 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000484238 (uc003jbz.1 uc021xvz.1 ) ENST00000310581 (uc003jcb.1 uc003jcc.1 uc003jca.1 uc003jcd.1 uc003jce.1 )ENST00000460137 ENST00000334602 ENST00000503656 ENST00000508104 ENST00000522877 ENST00000296820 (uc021xwa.1 uc021xwb.1 uc021xwc.1 ) Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for TERT (see all 4 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for TERT (see all 2 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 2 ): TERT (NM_198253 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for TERT Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat TERT
Additional cDNA sequence: AB085628.1 AF015950.1 AF018167.1 BC062321.1 JF896280.1 JF896281.1 JF896282.1 JF896283.1 JF896284.1 JF896285.1 JF896286.1
3 DOTS entries : DT.108983 DT.101961620
DT.40268927 24/29 AceView cDNA sequences (see all 29 ):
AI824948 AX810036 AB086379 AX810038 NM_003219 AW276315 BC062321 NM_198253 NM_198254 AB085628 AB086950 NM_198255 AF015950 AW270031 AX810378 BE514070 AA311750 AF018167 AA811084 AX810043 AA281296 BM824748 BM453198 AA299878 GeneLoc Exon Structure 5 Alternative Splicing Database (ASD) splice patterns (SP) for TERT About this scheme ExUns: 1a · 1b ^ 2 ^ 3a · 3b ^ 4 ^ 5 ^ 6a · 6b ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14 ^ 15 ^ 16a · 16b SP1 :       -                                   SP2 :       -                     -               SP3 :       -             -   -       -               SP4 :       -         -     -   -       -               SP5 :                   -   -                    
ECgene alternative splicing isoforms for TERT
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Expression for TERT gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section TERT expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: TCCGGCTGAA
About this image TERT expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table See TERT Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for TERT SOURCE GeneReport for Unigene cluster: Hs.492203 UniProtKB/Swiss-Prot: TERT_HUMAN, O14746 Tissue specificity : Expressed at a high level in thymocyte subpopulations, at an intermediate level in tonsilT-lymphocytes, and at a low to undetectable level in peripheral blood T-lymphocytes SABiosciences Expression via Pathway-Focused PCR Arrays including TERT (see all 9 ): Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for TERTBrowse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat TERT QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat TERT QIAGEN QuantiFast Probe-based Assays in human , mouse , rat TERT In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for TERT
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Orthologsfor TERT gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of eukaryotes.
Orthologs for TERT gene from 7/15 species (see all 15 ) About this table
ENSEMBL Gene Tree for TERT (if available)TreeFam Gene Tree for TERT (if available)
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Paralogsfor TERT gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section --
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Genomic Variantsfor TERT gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
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Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 5 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for TERT (1253262 - 1295184 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 7 variations for TERT 2 CNVs : 68962 68963 5 Indels : 42566 27803 46774 27802 27805 Human Gene Mutation Database (HGMD) : TERT Locus Specific Mutation Databases (LSDB): TERT SABiosciences Cancer Mutation PCR Assays
1 SABiosciences qBiomarker Copy Number PCR Array containing TERT :
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing TERT
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Disorders
/ Diseasesfor TERT gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database , Novoseek ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
TERT for disorders About GeneDecksing OMIM gene information: 187270 OMIM disorders : 609135 178500 127550 UniProtKB/Swiss-Prot: TERT_HUMAN, O14746
Note=Activation of telomerase has been implicated in cell immortalization and cancer cell pathogenesis Defects in TERT are associated with susceptibilty to aplastic anemia (AA) [MIM:609135]. AA is a rare disease in which the reduction of the circulating blood cells results from damage to the stem cell pool in bone marrow. In most patients, the stem cell lesion is caused by an autoimmune attack. T-lymphocytes, activated by an endogenous or exogenous, and most often unknown antigenic stimulus, secrete cytokines, including IFN-gamma, which would in turn be able to suppress hematopoiesis Note=Genetic variations in TERT are associated with coronary artery disease (CAD) Defects in TERT are the cause of dyskeratosis congenita autosomal dominant type 2 (DKCA2) [MIM:613989]. A rare multisystem disorder caused by defective telomere maintenance. It is characterized by progressive bone marrow failure, and the clinical triad of reticulated skin hyperpigmentation, nail dystrophy, and mucosal leukoplakia. Common but variable features include premature graying, aplastic anemia, low platelets, osteoporosis, pulmonary fibrosis, and liver fibrosis among others. Early mortality is often associated with bone marrow failure, infections, fatal pulmonary complications, or malignancy Defects in TERT are the cause of pulmonary fibrosis, and/or bone marrow failure, telomere-related, type 1 (PFBMFT1) [MIM:614742]. A disease associated with shortened telomeres. Pulmonary fibrosis is the most common manifestation. Other manifestations include aplastic anemia due to bone marrow failure, hepatic fibrosis, and increased cancer risk, particularly myelodysplastic syndrome and acute myeloid leukemia. Phenotype, age at onset, and severity are determined by telomere length. infections, fatal pulmonary complications, or malignancy Defects in TERT are the cause of dyskeratosis congenita autosomal recessive type 4 (DKCB4) [MIM:613989]. A rare multisystem disorder caused by defective telomere maintenance. It is characterized by progressive bone marrow failure, and the clinical triad of reticulated skin hyperpigmentation, nail dystrophy, and mucosal leukoplakia. Common but variable features include premature graying, aplastic anemia, low platelets, osteoporosis, pulmonary fibrosis, and liver fibrosis among others. Early mortality is often associated with bone marrow failure, infections, fatal pulmonary complications, or malignancy Defects in TERT are a cause of susceptibility to pulmonary fibrosis idiopathic (IPF) [MIM:178500]. Pulmonary fibrosis is a lung disease characterized by shortness of breath, radiographically evident diffuse pulmonary infiltrates, and varying degrees of inflammation and fibrosis on biopsy. It results in acute lung injury with subsequent scarring and endstage lung disease 20/181 diseases for TERT (see all 181 ): About MalaCards cri-du-chat syndrome dyskeratosis congenita autosomal dominant dyskeratosis congenita malignant peripheral nerve sheath tumor hoyeraal-hreidarsson syndrome estrogen-receptor negative breast cancer dyskeratosis congenita autosomal recessive mixed ductal-endocrine carcinoma bowenoid papulosis dyskeratosis cervical intraepithelial neoplasia pulmonary fibrosis squamous cell carcinoma non-small cell lung carcinoma aplastic anemia nijmegen breakage syndrome laryngeal squamous cell carcinoma gastroesophageal reflux disease clear cell renal cell carcinoma bile duct carcinoma 2 diseases from the University of Copenhagen DISEASES database for TERT :Dyskeratosis congenita Cancer 10/95 Novoseek disease relationships for TERT gene (see all 95 ) About this table
Disease
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
dyskeratosis congenita
85
10
15885610 (2), 17454774 (1), 17468339 (1), 19415813 (1) (see all 9 )
dyskeratosis congenita, autosomal dominant
77.5
6
16247010 (1), 17392301 (1), 18460650 (1), 17875000 (1) (see all 5 )
cancer
73.1
215
20478107 (4), 11934015 (4), 14532739 (4), 19809268 (3) (see all 99 )
tumors
69.5
256
10973321 (5), 17130181 (5), 18204433 (5), 17656250 (4) (see all 99 )
hepatocellular carcinoma
57
32
19627485 (2), 18753050 (2), 11944954 (2), 15143919 (2) (see all 27 )
laryngeal squamous cell carcinoma
54.7
13
17592663 (2), 17219990 (2), 15823813 (2), 11911285 (2) (see all 8 )
anemia aplastic
47.6
12
15814878 (2), 15885610 (2), 17625368 (1), 17640862 (1) (see all 8 )
benign meningioma
47.2
2
17227292 (1), 17415213 (1)
precancerous lesions
47
8
10429648 (2), 14716817 (2), 11906620 (1), 10779229 (1) (see all 5 )
premalignant
44.7
4
14575609 (1), 17581401 (1), 9620778 (1), 9731489 (1)
GeneTests: TERT Familial Pulmonary Fibrosis Genetic Association Database (GAD): TERT Human Genome Epidemiology (HuGE) Navigator: TERT (64 documents) Export disorders for TERT gene to outside databases
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Publicationsfor TERT gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for TERT gene, integrated from 9 sources (see all 1483 ): (articles sorted by number of sources associating them with TERT) Utopia : connect your pdf to the dynamic world of online information
Mutations in TERT, the gene for telomerase reverse transcriptase, in aplastic anemia. (PubMed id 15814878) 1 , 2 , 4, 9 Yamaguchi H.... Young N.S. (2005) Telomerase catalytic subunit homologs from fission yeast and human. (PubMed id 9252327) 1 , 2 , 3 Nakamura T.M.... Cech T.R. (1997) Hydrogen peroxide triggers nuclear export of telomerase reverse transcriptase via Src kinase family-dependent phosphorylation of tyrosine 707. (PubMed id 12808100) 1 , 2 , 9 Haendeler J....Dimmeler S. (2003) PML-IV functions as a negative regulator of telomeras e by interacting with TERT. (PubMed id 19567472) 1 , 2 , 9 Oh W....Song J. (2009) Nuclear protein tyrosine phosphatase Shp-2 is one important negative regulator of nuclear export of telomerase reverse transcriptase. (PubMed id 18829466) 1 , 2 , 9 Jakob S.... Haendeler J. (2008) Telomerase reverse-transcriptase homozygous mutations in autosomal recessive dyskeratosis congenita and Hoyeraal-Hreidarsson syndrome. (PubMed id 17785587) 1 , 2 , 9 Marrone A....Dokal I. (2007) Mutations in the reverse transcriptase component of telomerase (TERT) in patients with bone marrow failure. (PubMed id 15885610) 1 , 2 , 9 Vulliamy T.J....Dokal I. (2005) Constitutional hypomorphic telomerase mutations in patients with acute myeloid leukemia. (PubMed id 19147845) 1 , 2 , 9 Calado R.T.... Young N.S. (2009) Adult-onset pulmonary fibrosis caused by mutations in telomerase. (PubMed id 17460043) 1 , 2 , 9 Tsakiri K.D.... Garcia C.K. (2007) Human telomerase contains evolutionarily conserved catalytic and structural subunits. (PubMed id 9389643) 1 , 2 , 9 Harrington L.... Robinson M.O. (1997)
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External Searches for TERT gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing TERT gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
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Other Databases showing TERT gene
(According to HUGE )
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Specialized Databases showing TERT gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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About This Section Patent Information for TERT gene: Search GeneIP for patents involving TERT GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor TERT gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
OriGene Antibodies for TERT OriGene shRNA RFP for TERT OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for TERT OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for TERT OriGene Protein Over-expression Lysate for TERT Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for TERT OriGene 3'-UTR Clone for TERT OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for TERT OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for TERT Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs Browse OriGene full length recombinant human proteins expressed in human HEK293 cells OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for TERT OriGene Custom Protein Services for TERT OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat TERT QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing TERT QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat TERT QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat TERT QIAGEN QuantiFast Probe-based Assays in human , mouse , rat TERT QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat TERT
Tocris compounds for TERT
TERT Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for TERT
ThermoFisher Antibody for TERT
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat TERT
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