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Aliases & Descriptions for TEP1
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| | | Descriptions |
|---|
| TROVE domain family, member 1 2 | | Telomerase protein 1 3 | | p80 telomerase homolog 2, 3 | | telomerase protein component 1 2 | | telomerase-associated protein 1 2, 3 |
|
| | Search outside databases for aliases for TEP1 genePrevious GC identifers: GC14M018206 GC14M014623 GC14M018826 |
Summaries for TEP1(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for TEP1: This gene product is a component of the ribonucleoprotein complex responsible for telomerase activity which catalyzes the addition of new telomeres on the chromosome ends. The telomerase-associated proteins are conserved from ciliates to humans. [provided by RefSeq] UniProtKB/Swiss-Prot: TEP1_HUMAN, Q99973Function: Component of the telomerase ribonucleoprotein complex that is essential for the replication of chromosome termini. Also component of the ribonucleoprotein vaults particle, a multi-subunit structure involved in nucleo-cytoplasmic transport. Responsible for the localizing and stabilizing vault RNA (vRNA) association in the vault ribonucleoprotein particle. Binds to TERC (By similarity)Gene Wiki entry for TEP1 |
Genomic Location for TEP1
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the TEP1 gene 
Entrez Gene cytogenetic band: 14q11.2 Ensembl cytogenetic band: 14q11.2 HGNC cytogenetic band: 14q11.2TEP1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 14 GeneLoc Exon Structure GeneLoc location for GC14M019903:
(about GC identifiers)
Start:
|
19,905,766 bp from pter |
End:
|
19,951,420 bp from pter |
Size:
|
45,655 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000014.7 NT_026437.11
| Proteins for TEP1
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: TEP1_HUMAN, Q99973 (See
protein sequence)Recommended Name: Telomerase protein component 1 Size: 2627 amino acids; 290490 Da
Subunit: Component of the telomerase holoenzyme complex at least composed of TERT, DKC1, WDR79/TCAB1, NOP10, NHP2, GAR1, TEP1, EST1A, POT1 and a telomerase RNA template component (TERC). Component of the vault ribonucleoprotein particle, at least composed of MVP, PARP4 and one or more vault RNAs (vRNAs). Binds to VAULTRC1, VAULTRC2 and VAULTRC4/hvg4 vRNAs (By similarity)
Subcellular location: Nucleus (Probable). Telomere
Secondary accessions: A0AUV9Alternative splicing: 2 isoforms: Q99973-1 Q99973-2 Post-translational modifications:
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_009041.2
ENSEMBL proteins: ENSP00000262715 ENSP00000352180
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
5/7 Gene Ontology (GO) cellular component terms (links to tree view) (see all 7
): About this table
Antibodies for TEP1: Assays for TEP1: | Protein
Domains/ Families for TEP1(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry Q99973
ProtoNet protein and cluster: Q99973 2 Blocks protein families: IPB001680 G-protein beta WD-40 repeat signature IPB008858 TROVE
UniProtKB/Swiss-Prot: TEP1_HUMAN, Q99973Similarity: Contains 1 NACHT domainSimilarity: Contains 4 TEP1 N-terminal repeatsSimilarity: Contains 1 TROVE domainSimilarity: Contains 21 WD repeats | Gene Function for TEP1
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_007110
Applied Biosystems Silencer® siRNAs for TEP1
Sigma-Aldrich siRNA and siRNA Panels for TEP1  Sigma-Aldrich shRNA for TEP1  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_007110                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_007110                                  untagged cDNA clone in CMV expression vector: NM_007110 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_007110
UniProtKB/Swiss-Prot: TEP1_HUMAN, Q99973Function: Component of the telomerase ribonucleoprotein complex that is essential for the replication of chromosome termini. Also component of the ribonucleoprotein vaults particle, a multi-subunit structure involved in nucleo-cytoplasmic transport. Responsible for the localizing and stabilizing vault RNA (vRNA) association in the vault ribonucleoprotein particle. Binds to TERC (By similarity)Genatlas biochemistry entry for TEP1:telomerase protein component 11 MGI mutant phenotype (inferred from 1 allele ) (MGI details for Tep1):
4 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for TEP1
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
Gene Network CentralTM Interacting Genes and Proteins Network for TEP1 
5/8 Interacting proteins for TEP1 (ENSP000002627153) via UniProtKB, MINT, and/or STRING (see all 8
)About this table
1 Gene Ontology (GO) biological process term (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0000722 | telomere maintenance via recombination |
IDA | 10810353 | About this table
|
Drugs & Compounds for TEP1(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for TEP1 1 Novoseek chemical compound relationship for TEP1 gene
About this table
|
Transcripts for TEP1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_007110
Sigma-Aldrich siRNA and siRNA Panels for TEP1  Sigma-Aldrich shRNA for TEP1  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_007110 REFSEQ mRNAs for TEP1 gene: NM_007110.4
Applied Biosystems TaqMan ® Gene Expression Assays: NM_007110               OriGene GFP tagged cDNA clone in CMV expression vector: NM_007110                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_007110                                  untagged cDNA clone in CMV expression vector: NM_007110  Additional cDNA sequence: AB209669.1 AK124360.1 AK303307.1 BC126107.1 BC143812.1 BC143815.1 BX640983.1 U86136.2 9 DOTS entries: DT.40117791 DT.99991901 DT.97845575 DT.86848766 DT.100659440 DT.92422291 DT.40192344 DT.92050248 DT.95245860 24/114 AceView cDNA sequences (see all 114
):BM555079 AI040596 BM676849 BQ021178 AK124360 BM555913 AI476293 CA422831 BM556823 BM556329 CK823973 BF197089 BM810250 AI867200 BQ304178 BU543910 BQ957505 AW054694 N58857 BE739840 NM_007110 AA722421 BU521152 CF147492
highest scoring ESTs for TEP1:U86136 AI819204 AL703869 AW025109 AW752002 BE207462 BE739840 BE825654 BE933739 BE940121 Unigene Cluster for TEP1: Telomerase-associated protein 1 Hs.508835 [show with all ESTs]Unigene Representative Sequence: NM_007110
GeneLoc Exon Structure
5/8 Alternative Splicing Database (ASD) splice patterns (SP) for TEP1 (see all 8
)
| ExUns: | 1 | ^ | 2a | · | 2b | ^ | 3 | ^ | 4 | ^ | 5 | ^ | 6a | · | 6b | ^ | 7 | ^ | 8a | · | 8b | ^ | 9 | ^ | 10 | ^ | 11 | ^ | 12 | ^ | 13a | · | 13b | ^ | 14 | ^ | 15 | ^ | 16 | ^ | 17 | ^ | 18 | ^ | 19 | ^ | 20 | ^ | 21 | ^ | 22 | ^ | |
| SP1: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   |
| ExUns: | 23 | ^ | 24 | ^ | 25 | ^ | 26 | ^ | 27 | ^ | 28a | · | 28b | ^ | 29 | ^ | 30 | ^ | 31 | ^ | 32 | ^ | 33 | ^ | 34 | ^ | 35 | ^ | 36 | ^ | 37 | ^ | 38 | ^ | 39a | · | 39b | ^ | 40a | · | 40b | ^ | 41 | ^ | 42 | ^ | 43 | ^ | 44 | ^ | 45 | ^ | |
| SP1: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   |
| ExUns: | 46 | ^ | 47 | ^ | 48 | ^ | 49a | · | 49b | · | 49c | ^ | 50 | ^ | 51a | · | 51b | ^ | 52 | ^ | 53 | ^ | 54a | · | 54b | · | 54c | ^ | 55a | · | 55b | ^ | 56a | · | 56b | · | 56c | ^ | 57 | |
| SP1: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | - |   | - |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for TEP1
2 Ensembl transcripts including schematic representations: ENST00000262715
ENST00000359243
|
Expression for TEP1
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| TEP1 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for TEP1
1 / 2 / 3 6 probe-sets matching TEP1 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: GACTAGTGCC
SOURCE GeneReport for Unigene cluster: Hs.508835
Expression variation in blood from EXPOLDB for TEP1 UniProtKB/Swiss-Prot: TEP1_HUMAN, Q99973Tissue specificity: Ubiquitous |
Orthologs for TEP1
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for TEP1 gene from 5/6 species (see all 6
)
About this table Species with no ortholog for TEP1
ENSEMBL Gene Tree for TEP1 | Paralogs for TEP1(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| -- |
SNPs/Variants for TEP1(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for TEP1 (up to first 250kb)
|
Disorders & Mutations for TEP1
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 601686
10/23 Novoseek disease relationships for TEP1 gene (see all 23
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| endometrial hyperplasia |
34.85 |
1 |
11820598 (1) |
| cancer |
34.30 |
9 |
9537264 (2), 14621192 (1), 9676833 (1), 10568811 (1) (see all 8) |
| tumors |
33.62 |
6 |
11494028 (1), 9935231 (1), 12943625 (1), 12970299 (1) (see all 6) |
| gastric cancer |
32.33 |
3 |
11343177 (1), 16696344 (1) |
| gastric carcinoma |
31.99 |
3 |
11494028 (1), 12007281 (1), 9914776 (1) |
| carcinoma squamous cell |
27.02 |
6 |
8425208 (1), 11167139 (1), 15112252 (1), 10568811 (1) (see all 5) |
| benign tumor |
24.21 |
1 |
12440093 (1) |
| leukemia |
22.93 |
3 |
9753073 (1), 15165114 (1), 11877056 (1) |
| glioblastoma |
22.71 |
2 |
9874800 (1), 17196947 (1) |
| acute leukemia |
20.34 |
1 |
11877056 (1) |
About this table
Human Genome Epidemiology Navigator: TEP1 (45 documents)
|
Medical News for TEP1(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for TEP1 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 13/121 PubMed articles for TEP1 gene (see all 121
):- Comparative gene mapping of the human and mouse TEP1 genes, which encode one protein component of telomerases. (PubMed id 9403057)1, 2, 3 Saito T....Ishikawa F. (1997)
- Vaults and telomerase share a common subunit, TEP1. (PubMed id 10551828)1, 3, 4 Kickhoefer V.A....Rome L.H. (1999)
- A mammalian telomerase-associated protein. (PubMed id 9020079)1, 3, 4 Harrington L.... Robinson M.O. (1997)
- Polymerization defects within human telomerase are distinct from telomerase RNA and TEP1 binding. (PubMed id 11029039)1, 3, 4 Beattie T.L.... Harrington L. (2000)
- Human telomerase contains evolutionarily conserved catalytic and structural subunits. (PubMed id 9389643)3, 4 Harrington L.... Robinson M.O. (1997)
- Correlation between expression of human telomerase subunits and telomerase activity in esophageal squamous cell carcinoma. (PubMed id 14606063)1, 3 Li C....Wu X.Y. (2003)
- Telomerase activity is down regulated via decreases in hTERT mRNA but not TEP1 mRNA or hTERC during the differentiation of leukemic cells. (PubMed id 10810353)1, 3 Koyanagi Y....Watanabe N. (2000)
- Molecular interactions between telomerase and the tumor suppressor protein p53 in vitro. (PubMed id 10597287)1, 3 Li H....Liu J.P. (1999)
- Elevated insulin-like growth factor 1 receptor, hepatocyte growth factor receptor and telomerase protein expression in mild ulcerative colitis. (PubMed id 18938767)1, 3 Sipos F....Tulassay Z. (2008)
- Genetic variation in five genes important in telomere biology and risk for breast cancer. (PubMed id 17848914)1, 3 Savage S.A....Garcia-Closas M. (2007)
- Evaluation of MDR1, LRP, MRP, and topoisomerase IIalpha gene mRNA transcripts before and after interferon-alpha, and correlation with the mRNA expression level of the telomerase subunits hTERT and TEP1 in five unselected human melanoma cell lines. (PubMed id 12792796)1 Miracco C....Tosi P. (2003)
- Differential gene expression of human telomerase-associated protein hTERT and TEP1 in human hematopoietic cells. (PubMed id 10613358)1 Uchida N....Niho Y. (1999)
- The Telomerase/vault-associated protein TEP1 is required for vault RNA stability and its association with the vault particle. (PubMed id 11149928)1 Kickhoefer V.A....Rome L.H. (2001)
|
Search for TEP1
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing TEP1
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing TEP1
(According to HUGE)
About This Section
| -- |
Specialized Databases showing TEP1(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for TEP1(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for TEP1:

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Incremental update: 13 Oct 2009
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