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Aliases for TDGF1P6 Gene

Aliases for TDGF1P6 Gene

  • Teratocarcinoma-Derived Growth Factor 1 Pseudogene 6 2 3 5
  • Teratocarcinoma-Derived Growth Factor 6, Pseudogene 2 3
  • CRIPTO-6 3
  • TDGF6 3
  • CR-6 3

External Ids for TDGF1P6 Gene

Previous HGNC Symbols for TDGF1P6 Gene

  • TDGF6

Previous GeneCards Identifiers for TDGF1P6 Gene

  • GC03P135876

Summaries for TDGF1P6 Gene

GeneCards Summary for TDGF1P6 Gene

TDGF1P6 (Teratocarcinoma-Derived Growth Factor 1 Pseudogene 6) is a Pseudogene. Diseases associated with TDGF1P6 include Teratocarcinoma.

Additional gene information for TDGF1P6 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TDGF1P6 Gene

Genomics for TDGF1P6 Gene

GeneHancer (GH) Regulatory Elements for TDGF1P6 Gene

Promoters and enhancers for TDGF1P6 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I136153 Enhancer 0.4 Ensembl dbSUPER 550.8 -1.8 -1847 0.2 GC03P136156 TDGF1P6 PCCB MSL2 ENSG00000273455
GH03I136140 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -13.1 -13136 2.9 FOXA2 INSM2 FEZF1 RFX5 ZNF366 SCRT2 FOS PAF1 ZEB2 SP1 PCCB IL20RB ENSG00000273486 MSL2 TDGF1P6 ENSG00000273455 PPP2R3A
GH03I136134 Enhancer 0.9 ENCODE 0.3 -20.5 -20487 1.7 ARNT TCF12 GATA2 ATF7 RXRA NCOA1 ZNF592 MBD2 ATF4 GMEB1 PCCB ENSG00000273486 TDGF1P6 ENSG00000273455 PPP2R3A
GH03I136144 Enhancer 0.5 dbSUPER 0.4 -7.4 -7415 6.3 ZNF121 JUND PRDM6 GLIS1 ZNF600 WT1 SP7 PCCB ENSG00000273486 TDGF1P6 MSL2 ENSG00000273455 PPP2R3A
GH03I136157 Enhancer 0.2 dbSUPER 0.8 +2.7 2674 2.4 PCCB ENSG00000273486 PPP2R3A GC03P136156 TDGF1P6 MSL2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TDGF1P6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TDGF1P6 Gene

Genomic Locations for TDGF1P6 Gene
chr3:136,155,548-136,157,044
(GRCh38/hg38)
Size:
1,497 bases
Orientation:
Plus strand
chr3:135,874,390-135,875,886
(GRCh37/hg19)

Genomic View for TDGF1P6 Gene

Genes around TDGF1P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TDGF1P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TDGF1P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TDGF1P6 Gene

Proteins for TDGF1P6 Gene

Post-translational modifications for TDGF1P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TDGF1P6 Gene

Domains & Families for TDGF1P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TDGF1P6 Gene

Function for TDGF1P6 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TDGF1P6 Gene

Localization for TDGF1P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TDGF1P6 Gene

Pathways & Interactions for TDGF1P6 Gene

SuperPathways for TDGF1P6 Gene

No Data Available

Interacting Proteins for TDGF1P6 Gene

Gene Ontology (GO) - Biological Process for TDGF1P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TDGF1P6 Gene

Drugs & Compounds for TDGF1P6 Gene

No Compound Related Data Available

Transcripts for TDGF1P6 Gene

mRNA/cDNA for TDGF1P6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TDGF1P6 Gene

No ASD Table

Relevant External Links for TDGF1P6 Gene

GeneLoc Exon Structure for
TDGF1P6
ECgene alternative splicing isoforms for
TDGF1P6

Expression for TDGF1P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TDGF1P6 Gene

NURSA nuclear receptor signaling pathways regulating expression of TDGF1P6 Gene:

TDGF1P6
genes like me logo Genes that share expression patterns with TDGF1P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TDGF1P6 Gene

Orthologs for TDGF1P6 Gene

Evolution for TDGF1P6 Gene

ENSEMBL:
Gene Tree for TDGF1P6 (if available)
TreeFam:
Gene Tree for TDGF1P6 (if available)

No data available for Orthologs for TDGF1P6 Gene

Paralogs for TDGF1P6 Gene

No data available for Paralogs for TDGF1P6 Gene

Variants for TDGF1P6 Gene

Additional Variant Information for TDGF1P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TDGF1P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TDGF1P6 Gene

Disorders for TDGF1P6 Gene

MalaCards: The human disease database

(1) MalaCards diseases for TDGF1P6 Gene - From: GeneCards

Disorder Aliases PubMed IDs
teratocarcinoma
  • mixed embryonal carcinoma and teratoma
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for TDGF1P6

genes like me logo Genes that share disorders with TDGF1P6: view

No data available for UniProtKB/Swiss-Prot and Genatlas for TDGF1P6 Gene

Publications for TDGF1P6 Gene

  1. Assignment of human teratocarcinoma derived growth factor (TDGF) sequences to chromosomes 2q37, 3q22, 6p25 and 19q13.1. (PMID: 10393436) Scognamiglio B … Persico MG (Cytogenetics and cell genetics 1999) 2 3 58

Products for TDGF1P6 Gene

Sources for TDGF1P6 Gene

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