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Aliases for TCP11 Gene

Aliases for TCP11 Gene

  • T-Complex 11 2 3 5
  • Fertilization-Promoting Peptide Receptor 2 3
  • T-Complex 11 (A Murine Tcp Homolog) 2 3
  • T-Complex 11, Testis-Specific 2 3
  • Testis Secretory Sperm-Binding Protein Li 222n 3
  • T-Complex Protein 11 Homolog 3
  • T-Complex 11 Homolog (Mouse) 2
  • T-Complex 11 Homolog 3
  • D6S230E 3
  • FPPR 3

External Ids for TCP11 Gene

Previous HGNC Symbols for TCP11 Gene

  • D6S230E

Previous GeneCards Identifiers for TCP11 Gene

  • GC06M035087
  • GC06M035132
  • GC06M035193
  • GC06M034807
  • GC06M035133
  • GC06M035240
  • GC06M035735
  • GC06M035594
  • GC06M035598
  • GC06M036293

Summaries for TCP11 Gene

GeneCards Summary for TCP11 Gene

TCP11 (T-Complex 11) is a Protein Coding gene. An important paralog of this gene is TCP11X2.

UniProtKB/Swiss-Prot for TCP11 Gene

  • May play an important role in sperm function and fertility.

Gene Wiki entry for TCP11 Gene

No data available for Entrez Gene Summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TCP11 Gene

Genomics for TCP11 Gene

Regulatory Elements for TCP11 Gene

Enhancers for TCP11 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
- Elite enhancer/Elite enhancer-gene association

Enhancers around TCP11 on UCSC Golden Path with GeneCards custom track

Genomic Location for TCP11 Gene

Chromosome:
6
Start:
35,118,071 bp from pter
End:
35,148,610 bp from pter
Size:
30,540 bases
Orientation:
Minus strand

Genomic View for TCP11 Gene

Genes around TCP11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TCP11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TCP11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TCP11 Gene

Proteins for TCP11 Gene

  • Protein details for TCP11 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8WWU5-TCP11_HUMAN
    Recommended name:
    T-complex protein 11 homolog
    Protein Accession:
    Q8WWU5
    Secondary Accessions:
    • B2RCE9
    • B3KQ27
    • B7Z7B5
    • B7Z7G1
    • B7Z7H4
    • B7Z7S8
    • E7EP29
    • J3KNG1
    • Q8NF85
    • Q9NQZ9
    • Q9NR39

    Protein attributes for TCP11 Gene

    Size:
    503 amino acids
    Molecular mass:
    56141 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for TCP11 Gene

neXtProt entry for TCP11 Gene

Post-translational modifications for TCP11 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for TCP11 Gene

Domains & Families for TCP11 Gene

Protein Domains for TCP11 Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

Q8WWU5

UniProtKB/Swiss-Prot:

TCP11_HUMAN :
  • Belongs to the TCP11 family.
Family:
  • Belongs to the TCP11 family.
genes like me logo Genes that share domains with TCP11: view

No data available for Gene Families for TCP11 Gene

Function for TCP11 Gene

Molecular function for TCP11 Gene

GENATLAS Biochemistry:
T-complex 11 (murine tcp homolog)
UniProtKB/Swiss-Prot Function:
May play an important role in sperm function and fertility.
genes like me logo Genes that share phenotypes with TCP11: view

Animal Models for TCP11 Gene

MGI Knock Outs for TCP11:

Animal Model Products

CRISPR Products

miRNA for TCP11 Gene

miRTarBase miRNAs that target TCP11

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for TCP11 Gene

Localization for TCP11 Gene

Subcellular locations from UniProtKB/Swiss-Prot for TCP11 Gene

Membrane; Single-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for TCP11 Gene COMPARTMENTS Subcellular localization image for TCP11 gene
Compartment Confidence
cytosol 2
extracellular 1
mitochondrion 1
nucleus 1
peroxisome 1
plasma membrane 1

Gene Ontology (GO) - Cellular Components for TCP11 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with TCP11: view

Pathways & Interactions for TCP11 Gene

SuperPathways for TCP11 Gene

No Data Available

Interacting Proteins for TCP11 Gene

Gene Ontology (GO) - Biological Process for TCP11 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007275 multicellular organism development TAS 1893875
GO:0007283 spermatogenesis IEA --
GO:0030154 cell differentiation IEA --
genes like me logo Genes that share ontologies with TCP11: view

No data available for Pathways by source and SIGNOR curated interactions for TCP11 Gene

Drugs & Compounds for TCP11 Gene

(1) Additional Compounds for TCP11 Gene - From: Novoseek

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
genes like me logo Genes that share compounds with TCP11: view

Transcripts for TCP11 Gene

Unigene Clusters for TCP11 Gene

T-complex 11, testis-specific:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for TCP11 Gene

ExUns: 1a · 1b · 1c · 1d · 1e ^ 2a · 2b ^ 3 ^ 4a · 4b ^ 5a · 5b · 5c ^ 6a · 6b ^ 7 ^ 8a · 8b · 8c · 8d · 8e ^ 9a · 9b · 9c · 9d ^ 10 ^
SP1: - -
SP2: - - -
SP3: - - - - -
SP4: - - - -
SP5: - - - - - - - - - -
SP6: - - - - - - - - -
SP7: - - - - - -
SP8: - - - - - -
SP9: - - - - -
SP10: - - - - - - - - - - -
SP11: - -
SP12: - - - - - - - -
SP13: - - - - - - -
SP14: - - - - - - -
SP15: - - - - - -
SP16: - - - - - - - - -
SP17: - - - -
SP18:

ExUns: 11a · 11b · 11c ^ 12 ^ 13
SP1:
SP2:
SP3:
SP4:
SP5:
SP6:
SP7:
SP8:
SP9:
SP10:
SP11:
SP12:
SP13:
SP14:
SP15:
SP16:
SP17:
SP18:

Relevant External Links for TCP11 Gene

GeneLoc Exon Structure for
TCP11
ECgene alternative splicing isoforms for
TCP11

Expression for TCP11 Gene

mRNA expression in normal human tissues for TCP11 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for TCP11 Gene

This gene is overexpressed in Testis (x51.5).

Protein differential expression in normal tissues from HIPED for TCP11 Gene

This gene is overexpressed in Plasma (51.0), Testis (11.4), and Heart (6.6).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for TCP11 Gene



Protein tissue co-expression partners for TCP11 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of TCP11 Gene:

TCP11

SOURCE GeneReport for Unigene cluster for TCP11 Gene:

Hs.435371

mRNA Expression by UniProt/SwissProt for TCP11 Gene:

Q8WWU5-TCP11_HUMAN
Tissue specificity: Expressed only in fertile adult testis.
genes like me logo Genes that share expression patterns with TCP11: view

Primer Products

Orthologs for TCP11 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for TCP11 Gene

Organism Taxonomy Gene Similarity Type Details
dog
(Canis familiaris)
Mammalia TCP11 34
  • 86.22 (n)
  • 83.1 (a)
TCP11 35
  • 74 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Tcp11 34
  • 77.78 (n)
  • 77.03 (a)
Tcp11 16
Tcp11 35
  • 63 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia TCP11 34
  • 99.71 (n)
  • 99.13 (a)
TCP11 35
  • 98 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Tcp11 34
  • 76.2 (n)
  • 76.34 (a)
cow
(Bos Taurus)
Mammalia TCP11 35
  • 71 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia -- 35
  • 58 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 35
  • 53 (a)
ManyToMany
-- 35
  • 54 (a)
ManyToMany
chicken
(Gallus gallus)
Aves TCP11 34
  • 59.71 (n)
  • 48.64 (a)
-- 35
  • 46 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia -- 35
  • 47 (a)
OneToMany
fruit fly
(Drosophila melanogaster)
Insecta CG16721 35
  • 26 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea M05D6.2 35
  • 23 (a)
OneToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes SOK1 35
  • 12 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 35
  • 21 (a)
OneToMany
Species where no ortholog for TCP11 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • zebrafish (Danio rerio)

Evolution for TCP11 Gene

ENSEMBL:
Gene Tree for TCP11 (if available)
TreeFam:
Gene Tree for TCP11 (if available)

Paralogs for TCP11 Gene

Paralogs for TCP11 Gene

genes like me logo Genes that share paralogs with TCP11: view

Variants for TCP11 Gene

Sequence variations from dbSNP and Humsavar for TCP11 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs2234045 - 35,120,604(-) AGCAG(C/G)AGACC reference, missense
rs2234051 - 35,118,495(-) TCAGC(A/G)GATCC reference, synonymous-codon, missense
rs960716 -- 35,128,089(+) GTTAC(C/T)GTGGG intron-variant
rs4711403 -- 35,131,530(+) gccac(C/T)gcact intron-variant
rs4713837 -- 35,138,525(+) aaaaa(A/T)taaaa intron-variant

Structural Variations from Database of Genomic Variants (DGV) for TCP11 Gene

Variant ID Type Subtype PubMed ID
esv1001098 CNV deletion 20482838
esv1533887 CNV deletion 17803354
esv2633690 CNV deletion 19546169
nsv1119079 CNV deletion 24896259
nsv349272 CNV deletion 16902084
nsv511879 CNV loss 21212237

Variation tolerance for TCP11 Gene

Residual Variation Intolerance Score: 74% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 6.37; 76.92% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for TCP11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TCP11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for TCP11 Gene

Disorders for TCP11 Gene

Relevant External Links for TCP11

Genetic Association Database (GAD)
TCP11
Human Genome Epidemiology (HuGE) Navigator
TCP11
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TCP11

No disorders were found for TCP11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TCP11 Gene

Publications for TCP11 Gene

  1. Molecular characterization of the TCP11 gene which is the human homologue of the mouse gene encoding the receptor of fertilization promoting peptide. (PMID: 11756566) Ma Y. … Milunsky A. (Mol. Hum. Reprod. 2002) 2 3 4 65
  2. A testis-expressed Zn finger gene (ZNF76) in human 6p21.3 centromeric to the MHC is closely linked to the human homolog of the T-complex gene tcp-11. (PMID: 1427894) Ragoussis J. … Trowsdale J. (Genomics 1992) 2 3 22 65
  3. Human t-complex protein 11 (TCP11), a testis-specific gene product, is a potential determinant of the sperm morphology. (PMID: 21597245) Liu Y. … Ma Y. (Tohoku J. Exp. Med. 2011) 2 3 65
  4. The role of height-associated loci identified in genome wide association studies in the determination of pediatric stature. (PMID: 20546612) Zhao J. … Grant S.F. (BMC Med. Genet. 2010) 3 46 65
  5. Many sequence variants affecting diversity of adult human height. (PMID: 18391951) Gudbjartsson D.F. … Stefansson K. (Nat. Genet. 2008) 3 46 65

Products for TCP11 Gene

Sources for TCP11 Gene

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