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Aliases & Descriptions for TCL1A
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases TCL-1 3 TCL1 1 , 2 , 3 , 5
Descriptions Oncogene TCL1 3 Protein p14 TCL1 3 T-cell leukemia/lymphoma 1A 2 T-cell lymphoma-1 2 T-cell lymphoma-1A 2
Search outside databases for aliases for TCL1A genePrevious GC identifers: GC14M093687 GC14M089992 GC14M094166
Summaries for TCL1A (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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UniProtKB/Swiss-Prot: TCL1A_HUMAN, P56279 Function : Enhances the phosphorylation and activation of AKT1, AKT2 and AKT3. Promotes nucleartranslocation of AKT1. Enhances cell proliferation, stabilizes mitochondrial membrane potentialand promotes cell survival
Gene Wiki entry for TCL1A
Genomic Location for TCL1A
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
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Transcription factor binding sites according to
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the TCL1A gene Entrez Gene cytogenetic band: 14q32.1 Ensembl cytogenetic band: 14q32.13 HGNC cytogenetic band: 14q32.1 TCL1A Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 14 GeneLoc Exon Structure
GeneLoc location for GC14M095246:
(about GC identifiers )
Start:
95,246,057 bp from pter
End:
95,250,286 bp from pter
Size:
4,230 bases
Orientation:
minus strand
RefSeq DNA sequence: NC_000014.7 NT_026437.11 Proteins for TCL1A
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
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Abcam ,
Biochemical Assays by
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Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
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UniProtKB/Swiss-Prot: TCL1A_HUMAN, P56279 (See
protein sequence )Recommended Name: T-cell leukemia/lymphoma protein 1A Size : 114 amino acids; 13460 Da
Subunit : Homodimer. Interacts with AKT1, AKT2 and AKT3 (via PH domain). Interacts with PNPT1; theinteraction has no effect on PNPT1 exonuclease activity
Subcellular location : Cytoplasm (By similarity). Nucleus (By similarity). Microsome. Endoplasmicreticulum. Note=Microsomal fraction
PDB structures from and Proteopedia : 1JSG (3D)
 
Secondary accessions : Q6IBK7
Post-translational modifications:
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (2 alternative transcripts):
NP_001092195.1 NP_068801.1 ENSEMBL proteins: ENSP00000385036 ENSP00000216612 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 4 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for TCL1A: Invitrogen Antibodies for TCL1A Millipore Mono- and Polyclonal Antibodies for the study of TCL1A Sigma-Aldrich Antibodies for TCL1A R&D Systems Antibodies for TCL1A Antibodies from Abcam (Tcl1 ), each with their Abpromise SM Monoclonal and Polyclonal Antibodies from Abnova (TCL1A ) Novus Biologicals Antibodies for TCL1A
Assays for TCL1A:
Protein
Domains/ Families for TCL1A(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P56279 ProtoNet protein and cluster: P56279
1 Blocks protein family : IPB004832 TCL1/MTCP1 family UniProtKB/Swiss-Prot: TCL1A_HUMAN, P56279 Similarity : Belongs to the TCL1 family
Gene Function for TCL1A
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_001098725 Applied Biosystems Silencer ® siRNAs for TCL1A Sigma-Aldrich siRNA for TCL1A Sigma-Aldrich shRNA Panels and shRNA for TCL1A Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001098725                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001098725                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_001098725  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001098725 UniProtKB/Swiss-Prot: TCL1A_HUMAN, P56279 Function : Enhances the phosphorylation and activation of AKT1, AKT2 and AKT3. Promotes nucleartranslocation of AKT1. Enhances cell proliferation, stabilizes mitochondrial membrane potentialand promotes cell survival
Genatlas biochemistry entry for TCL1A :T cell leukemia,transcript 1a,14kDa,normally expressed in pre-B cells and immature IgM expressing Bcells and in early T cell progenitors with very low levels in bone marrow and peripherallymphocytes activated in T cell leukemia and lymphoma by rearrangements of the 14q32.1 region
1 MGI mutant phenotype (inferred from 1 allele ) (MGI details for Tcl1) :1 Gene Ontology (GO) molecular function term (links to tree view) :
About this table
Pathways & Interactions for TCL1A
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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1 Sigma-Aldrich "Your Favorite Gene" Pathway for TCL1A (Your Favorite Gene powered by Ingenuity) Gene Network CentralTM Interacting Genes and Proteins Network for TCL1A 5/14 Interacting proteins for TCL1A (ENSP00000216612 3 P56279 2 ) via UniProtKB, MINT, and/or STRING (see all 14
)About this table 1 Gene Ontology (GO) biological process term (links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0007275 multicellular organismal development
TAS 7809072
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Drugs & Compounds for TCL1A (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for TCL1A
Transcripts for TCL1A(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_001098725 Sigma-Aldrich siRNA for TCL1A Sigma-Aldrich shRNA Panels and shRNA for TCL1A Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001098725 NM_021966
REFSEQ mRNAs for TCL1A gene (2 alternative transcripts): NM_001098725.1 NM_021966.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001098725 NM_021966
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001098725                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001098725                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_001098725  
Additional cDNA sequence: BC003574.1 BC005831.2 BC009502.2 BC009891.2 BC014024.1 CR456796.1 CR597499.1 CR602539.1 CR607470.1 CR614970.1 X82240.1
6 DOTS entries : DT.455316 DT.97847936 DT.100719918 DT.40106305 DT.92447322 DT.97847934
24/315 AceView cDNA sequences (see all 315
):AW733068 BE514042 CR597499 BM927612 BM909407 BE270847 BI225265 BX443335 BQ061874 CR614970 BQ060857 AI950484 BU151153 BQ056518 BQ063405 BX371316 BE268242 W02638 BQ061897 BQ061232 BF976050 BE270193 BG754764 BM470088
highest scoring ESTs for TCL1A :X82240 AA321269 AA362309 AL560722 AW328037 AW404960 AW405079 AW406115 AW406275 AW406506
Unigene Cluster for TCL1A: T-cell leukemia/lymphoma 1A Hs.2484 [show with all ESTs ] Unigene Representative Sequence: BQ057554 GeneLoc Exon Structure 5/7 Alternative Splicing Database (ASD) splice patterns (SP) for TCL1A (see all 7
) ExUns: 1a · 1b · 1c ^ 2a · 2b · 2c ^ 3 ^ 4a · 4b ^ 5a · 5b ^ 6a · 6b SP1 :       -   -   -       -           SP2 :                           SP3 :       -   -   -       -           SP4 :       -   -   -       -   -   -       SP5 :           -       -          
About this scheme ECgene alternative splicing isoforms for TCL1A 2 Ensembl transcripts including schematic representations : ENST00000402399
ENST00000216612
Expression for TCL1A
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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TCL1A expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for TCL1A 1 / 2 / 3
5 probe-sets matching TCL1A gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: AATACTTTTTSOURCE GeneReport for Unigene cluster: Hs.2484 UniProtKB/Swiss-Prot: TCL1A_HUMAN, P56279 Tissue specificity : Restricted in the T-cell lineage to immature thymocytes and activatedperipheral lymphocytes. Preferentially expressed early in T- and B-lymphocyte differentiation
Orthologs for TCL1A
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for TCL1A gene from 4 species
About this table Species with no ortholog for TCL1A ENSEMBL Gene Tree for TCL1A Paralogs for TCL1A (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for TCL1A gene MTCP1 2
SNPs/Variants for TCL1A (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for TCL1A (up to first 250kb)
Disorders & Mutations for TCL1A
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
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and/or TGDB .)
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OMIM: 186960 UniProtKB/Swiss-Prot: TCL1A_HUMAN, P56279
Chromosomal aberrations activating TCL1A are found in chronic T-cell leukemias (T-CLL).Translocation t(14;14)(q11;q32); translocation t(7;14)(q35;q32); inversion inv(14)(q11;q32) thatinvolves the T-cell receptor alpha/delta locuses
10/27 Novoseek disease relationships for TCL1A gene (see all 27
)
Disease
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
leukemia prolymphocytic
93.71
14
9691281 (1), 8634440 (1), 9657733 (1), 10959629 (1) (see all 12 )
leukemia t-cell
90.10
45
11607815 (4), 11710897 (2), 12011454 (2), 10077617 (2) (see all 30 )
lymphocytic leukemia t-cell chronic
81.53
3
9520462 (1), 10197596 (1)
ataxia telangiectasia
71.48
7
8634440 (1), 11752899 (1), 11297767 (1), 7662982 (1) (see all 6 )
leukemia lymphocytic chronic
63.41
9
16341048 (2), 17178851 (1), 12011454 (1), 15661260 (1) (see all 7 )
lymphoma
61.68
43
11304575 (7), 10792782 (6), 19147787 (3), 16978196 (2) (see all 15 )
leukemia
58.96
13
9520462 (2), 12011454 (1), 12576313 (1), 11054065 (1) (see all 11 )
lymphoma aids-related
57.96
2
10449776 (1), 11304575 (1)
leukemogenesis
57.55
4
10851082 (1), 10344735 (1), 11707444 (1), 17846228 (1)
lymphoma b-cell
56.10
9
16978196 (3), 10786666 (2), 17260020 (1), 15586235 (1) (see all 5 )
About this table 1 PharmGKB disease relationship for TCL1A gene About this table Genatlas disease: TCL1A chronic lymphocytic leukemia (T-CLL) associated breakpoint 1,with inversion inv(14) (q11;q32) andtranslocations t(14;14)(q11;q32),t(7;14)(q35;q32)
Medical News for TCL1A (Possibly Related Articles in
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--
Publications for TCL1A (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/105 PubMed articles for TCL1A gene (see all 105
): Identification of the TCL1 gene involved in T-cell malignancies. (PubMed id 7809072) 1, 2, 3, 4 Virgilio L....Russo G. (1994) The protooncogene TCL1 is an Akt kinase coactivator. (PubMed id 10983986) 1, 3, 4 Laine J....Noguchi M. (2000) Differential regulation of Akt kinase isoforms by the members of the TCL1 oncogene family. (PubMed id 11707444) 1, 3, 4 Laine J....Noguchi M. (2002) Crystal structure of p14TCL1, an oncogene product involved in T-cell prolymphocytic leukemia, reveals a novel beta-barrel topology. (PubMed id 9519406) 1, 3, 4 Hoh F.... van Tilbourgh H. (1998) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 3, 4 Gerhard D.S....Malek J. (2004) Characterization and localization of the TCL-1 oncogene product. (PubMed id 7987816) 3, 4 Fu T.-B....Croce C.M. (1994) Molecular analysis of a t(14;14) translocation in leukemic T-cells of an ataxia telangiectasia patient. (PubMed id 2783489) 2, 3 Russo G....Croce C.M. (1989) Tcl1 enhances Akt kinase activity and mediates its nuclear translocation. (PubMed id 10716693) 1, 4 Pekarsky Y....Croce C.M. (2000) Expression of the TCL1 gene at 14q32 in B-cell malignancies but not in adult T-cell leukemia. (PubMed id 9738977) 1, 3 Takizawa J....Seto M. (1998) Identification of Akt association and oligomerization domains of the Akt kinase coactivator TCL1. (PubMed id 11839817) 1, 4 Kunstle G....Noguchi M. (2002)
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Genome Databases showing TCL1A
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AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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-- Services for TCL1A (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Services for TCL1A
Summaries for TCL1A
Technologies for TCL1A
Transcripts for TCL1A
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009