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Aliases for TCF7L1-IT1 Gene

Subcategory (RNA class) for TCF7L1-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TCF7L1-IT1 Gene

  • TCF7L1 Intronic Transcript 1 2 3 5
  • TCF7L1 Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for TCF7L1-IT1 Gene

Previous GeneCards Identifiers for TCF7L1-IT1 Gene

  • GC00U933050
  • GC02P085414

Summaries for TCF7L1-IT1 Gene

GeneCards Summary for TCF7L1-IT1 Gene

TCF7L1-IT1 (TCF7L1 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TCF7L1-IT1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TCF7L1-IT1 Gene

Genomics for TCF7L1-IT1 Gene

Regulatory Elements for TCF7L1-IT1 Gene

Enhancers for TCF7L1-IT1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02H085174 1.1 Ensembl ENCODE 0.4 -10.8 -10787 2 ELF3 BRD4 SOX13 FOXA2 SAP130 MLX ARID4B MAX ZNF644 RAD21 TCF7L1 RNU6-674P TCF7L1-IT1
GH02H085189 0.5 ENCODE 0.7 +4.0 4004 2 GATA3 ZFP64 PRDM10 TCF7L1 TCF7L1-IT1 GC02P085205
GH02H085178 0.7 ENCODE 0.4 -7.4 -7356 1 JUN FEZF1 ZIC2 ZNF664 ZNF316 ZSCAN5C MAFK SCRT1 MAFG OSR2 RNU6-674P TCF7L1 TCF7L1-IT1
GH02H085143 0.9 ENCODE 0.3 -42.4 -42410 1 FOXA2 ATF1 ARID4B RAD21 RARA YY1 CREM MIXL1 SP5 REST RNU6-674P TCF7L1 TCF7L1-IT1
GH02H085162 0.8 Ensembl ENCODE 0.3 -23.2 -23245 1 HNF4A ZNF548 PRDM1 RAD21 NR2F2 TCF7L1 USP39 SNORD94 ELMOD3 RNU6-674P TCF7L1-IT1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TCF7L1-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TCF7L1-IT1 Gene

Chromosome:
2
Start:
85,186,409 bp from pter
End:
85,187,253 bp from pter
Size:
845 bases
Orientation:
Plus strand

Genomic View for TCF7L1-IT1 Gene

Genes around TCF7L1-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TCF7L1-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TCF7L1-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for TCF7L1-IT1 Gene

Proteins for TCF7L1-IT1 Gene

Post-translational modifications for TCF7L1-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TCF7L1-IT1 Gene

Domains & Families for TCF7L1-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TCF7L1-IT1 Gene

Function for TCF7L1-IT1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TCF7L1-IT1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TCF7L1-IT1 Gene

Localization for TCF7L1-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TCF7L1-IT1 Gene

Pathways & Interactions for TCF7L1-IT1 Gene

SuperPathways for TCF7L1-IT1 Gene

No Data Available

Interacting Proteins for TCF7L1-IT1 Gene

Gene Ontology (GO) - Biological Process for TCF7L1-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TCF7L1-IT1 Gene

Drugs & Compounds for TCF7L1-IT1 Gene

No Compound Related Data Available

Transcripts for TCF7L1-IT1 Gene

mRNA/cDNA for TCF7L1-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TCF7L1-IT1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for TCF7L1-IT1 Gene

No ASD Table

Relevant External Links for TCF7L1-IT1 Gene

GeneLoc Exon Structure for
TCF7L1-IT1
ECgene alternative splicing isoforms for
TCF7L1-IT1

Expression for TCF7L1-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TCF7L1-IT1 Gene

genes like me logo Genes that share expression patterns with TCF7L1-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TCF7L1-IT1 Gene

Orthologs for TCF7L1-IT1 Gene

Evolution for TCF7L1-IT1 Gene

ENSEMBL:
Gene Tree for TCF7L1-IT1 (if available)
TreeFam:
Gene Tree for TCF7L1-IT1 (if available)

No data available for Orthologs for TCF7L1-IT1 Gene

Paralogs for TCF7L1-IT1 Gene

No data available for Paralogs for TCF7L1-IT1 Gene

Variants for TCF7L1-IT1 Gene

Relevant External Links for TCF7L1-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TCF7L1-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TCF7L1-IT1 Gene

Disorders for TCF7L1-IT1 Gene

Relevant External Links for TCF7L1-IT1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TCF7L1-IT1

No disorders were found for TCF7L1-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TCF7L1-IT1 Gene

Publications for TCF7L1-IT1 Gene

No publications were found for TCF7L1-IT1 Gene.

Products for TCF7L1-IT1 Gene

Sources for TCF7L1-IT1 Gene

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