TCF4 Gene
protein-coding GIFtS : 66
GCID: GC18 M052889
transcription factor 4
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Aliasesfor TCF4 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Transcription Factor 4 1 2 ITF-22 3 ITF21 2 3 5 SEF-22 3 BHLHb191 TCF-42 3 SEF22 3 5 SL3-3 Enhancer Factor 22 3 E2-21 2 PTHS2 5 SEF2-1B1 2 SEF2-12 Class B Basic Helix-Loop-Helix Protein 192 3 SEF2-1A2 Immunoglobulin Transcription Factor 22 3 BHLHB193
Export aliases for TCF4 gene to outside databases Previous GC identifers: GC18M052983 GC18M052797 GC18M052679 GC18M051043 GC18M051045 GC18M049599
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Summariesfor TCF4 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for TCF4 : This gene encodes transcription factor 4, a basic helix-loop-helix transcription factor. The encoded protein recognizes an Ephrussi-box ('E-box') binding site ('CANNTG') - a motif first identified in immunoglobulin enhancers. This gene is broadly expressed, and may play an important role in nervous system development. Defects in this gene are a cause of Pitt-Hopkins syndrome. Multiple alternatively spliced transcript variants that encode different proteins have been described. (provided by RefSeq, Aug 2011) UniProtKB/Swiss-Prot: ITF2_HUMAN, P15884 Function : Transcription factor that binds to the immunoglobulin enchancer Mu-E5/KE5-motif. Involved in the initiationof neuronal differentiation. Activates transcription by binding to the E box (5'-CANNTG-3'). Binds to the E-box present in the somatostatin receptor 2 initiator element (SSTR2-INR) to activate transcription (By similarity). Preferentially binds to either 5'-ACANNTGT-3' or 5'-CCANNTGG-3' Gene Wiki entry for TCF4
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Genomic Viewsfor TCF4 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000018.9 NC_018929.1 NT_025028.14 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the TCF4 gene promoter: FOXD3 C/EBPalpha E47 CREB SRY Nkx6-1 deltaCREB POU2F1a Zic3 Other transcription factors Search SABiosciences Chromatin IP Primers for TCF4 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat TCF4
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 18q21.1 Ensembl cytogenetic band: 18q21.2 HGNC cytogenetic band: 18q21.1 TCF4 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 18 GeneLoc Exon Structure
GeneLoc location for GC18M052889: view genomic region
(about GC identifiers )
Start:
52,889,562 bp from pter
End:
53,332,018 bp from pter
Size:
442,457 bases
Orientation:
minus strand
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Proteinsfor TCF4 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: ITF2_HUMAN, P15884 (See
protein sequence )Recommended Name: Transcription factor 4 Size : 667 amino acids; 71308 Da
Subunit : Efficient DNA binding requires dimerization with another bHLH protein. Forms homo- or heterooligomers withmyogenin. Interacts with HIVEP2. Interacts with NEUROD2 (By similarity)
Subcellular location : Nucleus (Probable)
Sequence caution : Sequence=AAA60310.1; Type=Miscellaneous discrepancy; Note=Incomplete and probable erroneous sequence;Sequence=AAA60312.1; Type=Miscellaneous discrepancy; Note=Incomplete and probable erroneous sequence;
1 PDB 3D structure from and Proteopedia for TCF4 :2KWF (3D)
 
Secondary accessions : B3KT62 B3KUC0 B4DT37 B4DUG3 G0LNT9 G0LNU0 G0LNU1 G0LNU2 G0LNU8 G0LNU9 G0LNV0G0LNV1 Q08AP2 Q08AP3 Q15439 Q15440 Q15441 Alternative splicing : 11 isoforms : P15884-1 P15884-2 P15884-3 P15884-4 P15884-5 P15884-6 P15884-7 P15884-8 P15884-9 P15884-10 P15884-11 Explore the universe of human proteins at neXtProt for TCF4: NX_P15884 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_P15884 TCF4 Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins (12 alternative transcripts):
NP_001077431.1 NP_001230155.1 NP_001230156.1 NP_001230157.1 NP_001230159.1 NP_001230160.1 NP_001230161.1 NP_001230162.1 NP_001230163.1 NP_001230164.1 NP_001230165.1 NP_003190.1 ENSEMBL proteins: ENSP00000348374 ENSP00000455135 ENSP00000409447 ENSP00000439656 ENSP00000445202 ENSP00000440731 ENSP00000457649 ENSP00000455346 ENSP00000439827 ENSP00000441562 ENSP00000455179 ENSP00000457765 ENSP00000455984 ENSP00000455763 ENSP00000455261 ENSP00000454366 ENSP00000455418 ENSP00000456125 ENSP00000457263 ENSP00000381382 ENSP00000454647 ENSP00000468729 ENSP00000455304 ENSP00000456983 ENSP00000457392 ENSP00000455071 ENSP00000458122 ENSP00000456802 ENSP00000457245 ENSP00000454584 ENSP00000468277 ENSP00000456220 ENSP00000457113 ENSP00000455163 ENSP00000456917 ENSP00000457747 ENSP00000454328 ENSP00000455450 ENSP00000454866 ENSP00000454352 ENSP00000457082 ENSP00000454441 ENSP00000346440 Reactome Protein details: P15884 Human Recombinant Protein Products: Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view) : About this table
TCF4 for ontologies About GeneDecksing TCF4 Antibody Products: Assay Products for TCF4:
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Protein
Domains / Familiesfor TCF4 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
TCF4 for domains About GeneDecksing 1 InterPro domain/family :
Graphical View of Domain Structure for InterPro Entry P15884 ProtoNet protein and cluster: P15884
1 Blocks protein family : IPB001092 Basic helix-loop-helix dimerization domain bHLH UniProtKB/Swiss-Prot: ITF2_HUMAN, P15884 Domain : the 9aaTAD motif is a transactivation domain present in a large number of yeast and animal transcriptionfactors Similarity : Contains 1 bHLH (basic helix-loop-helix) domain
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Functionfor TCF4 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: ITF2_HUMAN, P15884 Function : Transcription factor that binds to the immunoglobulin enchancer Mu-E5/KE5-motif. Involved in the initiationof neuronal differentiation. Activates transcription by binding to the E box (5'-CANNTG-3'). Binds to the E-box present in the somatostatin receptor 2 initiator element (SSTR2-INR) to activate transcription (By similarity). Preferentially binds to either 5'-ACANNTGT-3' or 5'-CCANNTGG-3'
Genatlas biochemistry entry for TCF4 : transcription factor 4,with several alternatively spliced isoforms Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for TCF4 (see all 6 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for TCF4 (see all 2 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 2 ): TCF4 (NM_001083962 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for TCF4 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat TCF4
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for TCF4
Gene Ontology (GO): 5/12 molecular function terms (GO ID links to tree view) (see all 12 ): About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding
ISS 8978694 GO:0001011 sequence-specific DNA binding RNA polymerase recruiting transcription factor activity
ISS 8978694 GO:0001077 RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
ISS 8978694 GO:0001087 TFIIB-class binding transcription factor activity
ISS 8978694 GO:0001093 TFIIB-class transcription factor binding
ISS 8978694
TCF4 for ontologies About GeneDecksing 3 GenomeRNAi human phenotypes for TCF4 :Animal Models: Mouse knock-outs for TCF4: Tcf4 tm1Zhu Tcf4 tm1.1Hmb 8 MGI mutant phenotypes (inferred from 4 alleles ) (MGI details for Tcf4) :
TCF4 for phenotypes About GeneDecksing
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Pathways & Interactionsfor TCF4 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways  - 5/14 super-pathways (see all 14 ) About this table See pathways by source Super-pathway contained gene-specific pathways 1 Rho Family GTPases 2 Human Embryonic Stem Cell Pluripotency 3 Activation of p38 alpha/beta MAPK 4 Selected targets of Oct-3/4 5 Neural Crest Differentiation
Pathway sources See GeneCards unified pathways Show all pathways 1 EMD Millipore Pathway for TCF4 5/10 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for TCF4 (see all 10 )4 BioSystems Pathways for TCF4 3
Reactome Pathways for TCF4
TCF4 for pathways About GeneDecksing Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for TCF4 STRING Interaction
Network Preview (showing 5 interactants - click image to see 25)5/53 Interacting proteins for TCF4 (P15884 1 , 2 , 3 ENSP00000346440 4 ) via UniProtKB, MINT, STRING , and/or I2D (see all 53 )About this table Gene Ontology (GO): 5/8 biological process terms (GO ID links to tree view) (see all 8 ): About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0000122 negative regulation of transcription from RNA polymerase II promoter
IEA -- GO:0006352 DNA-dependent transcription, initiation
ISS 8978694 GO:0006355 regulation of transcription, DNA-dependent
-- -- GO:0006367 transcription initiation from RNA polymerase II promoter
ISS 8978694 GO:0045666 positive regulation of neuron differentiation
ISS --
TCF4 for ontologies About GeneDecksing
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Drugs & Compoundsfor TCF4 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section
TCF4 for compounds About GeneDecksing Browse Tocris compounds for TCF4 2 Novoseek chemical compound relationships for TCF4 gene About this table
Compound
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
mononucleotide
48.4
3
10918391 (2)
glycogen
32
2
12603528 (1), 14687479 (1)
Search CenterWatch for drugs/clinical trials and news about TCF4 / ITF2
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Transcriptsfor TCF4 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for TCF4 gene (12 alternative transcripts): NM_001083962.1 NM_001243226.1 NM_001243227.1 NM_001243228.1 NM_001243230.1 NM_001243231.1 NM_001243232.1 NM_001243233.1 NM_001243234.1 NM_001243235.1 NM_001243236.1 NM_003199.2 Unigene Cluster for TCF4:
Transcription factor 4 Hs.605153 [show with all ESTs ] Unigene Representative Sequence: NM_001083962 18/48 Ensembl transcripts including schematic representations, and UCSC links where relevant (see all 48 ): ENST00000356073 ENST00000568673 ENST00000457482 ENST00000543082 ENST00000540999 ENST00000537578 ENST00000564999 ENST00000568740 ENST00000562680 ENST00000537856 ENST00000544241 ENST00000561992 ENST00000561831 ENST00000565018 ENST00000570287 ENST00000564228 ENST00000567880 ENST00000566286 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for TCF4 (see all 6 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for TCF4 (see all 2 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 2 ): TCF4 (NM_001083962 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for TCF4 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat TCF4
Additional cDNA sequence: AB209741.1 AK021980.1 AK026674.1 AK095041.1 AK095066.1 AK096862.1 AK122765.1 AK299169.1 AK300038.1 AK300612.1 AK300636.1 AK301144.1 AK315074.1 AK316165.1 BC031056.1 BC125084.1 BC125085.1 FR748202.1 FR748203.1 FR748205.1 FR748207.1 FR748208.1 FR748209.1 FR748210.1 FR748211.1 FR748212.1 FR748213.1 FR748214.1 FR748215.1 FR748216.1 FR748217.1 FR748218.1 FR748219.1 FR748220.1 FR748221.1 FR748222.1 FR748223.1 M74718.1 M74719.1 M74720.1 X52079.1
24/47 DOTS entries (see all 47 ): DT.448128 DT.86840324
DT.100892351 DT.100806486 DT.121101533 DT.100892349 DT.95169893 DT.100808993 DT.441773 DT.95292982 DT.121101581 DT.95169897 DT.121101588 DT.87079130 DT.100789378 DT.75148455 DT.75182387 DT.100892345 DT.100789379 DT.100753719 DT.75169556 DT.100892346 DT.40115779 DT.92447456 24/512 AceView cDNA sequences (see all 512 ):
AA287187 T55908 AI291882 AI784460 AI431709 BM661935 AI003998 AA865756 AI097389 AI492030 AA861728 CD672923 AA232583 AU122270 BE795544 D61472 BU069915 BF057715 AA669136 BX420631 AA287097 BM800432 AI174523 AU120247 GeneLoc Exon Structure 5/13 Alternative Splicing Database (ASD) splice patterns (SP) for TCF4 (see all 13 ) About this scheme ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14 ^ 15 ^ 16 ^ 17a · 17b · 17c ^ 18 ^ 19 ^ 20 ^ 21a · 21b ^ 22a · SP1 :           -       -     -   -   -       -                 -       SP2 :           -       -     -   -   -       -                 -       SP3 :                 -     -   -   -       -                 -       SP4 :                     -   -   -       -                 -       SP5 :                                               -      
ExUns: 22b ^ 23 ^ 24a · 24b · 24c ^ 25a · 25b ^ 26 ^ 27a · 27b SP1 :         -   -           SP2 :           -           SP3 :         -   -           SP4 :           -           SP5 :                    
ECgene alternative splicing isoforms for TCF4
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Expression for TCF4 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section TCF4 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: GGACAGATGT
About this image TCF4 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table See TCF4 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for TCF4 SOURCE GeneReport for Unigene cluster: Hs.605153 UniProtKB/Swiss-Prot: ITF2_HUMAN, P15884 Tissue specificity : Expressed in adult heart, brain, placenta, skeletal muscle and to a lesser extent in the lung. Indeveloping embryonic tissues, expression mostly occurs in the brain SABiosciences Expression via Pathway-Focused PCR Arrays including TCF4 : Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for TCF4Browse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat TCF4 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat TCF4 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat TCF4 In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for TCF4
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Orthologsfor TCF4 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of animals.
Orthologs for TCF4 gene from 5/19 species (see all 19 ) About this table
Organism
Taxonomic classification
Gene
Description
Human Similarity
Orthology Type
Details
lizard (Anolis carolinensis)
Reptilia
TCF46 --
--
95(a) 72(a)
1 ↔ 1possible ortholog
GL343213.1(526409-578219) AAWZ02036688(11541-14447)
African clawed frog (Xenopus laevis)
Amphibia
CF342043.12
--
80.67(n)
 
CF342043.1
zebrafish (Danio rerio)
Actinopterygii
CABZ01109624.16 tcf46
transcription factor 4
78(a) 73(a)
possible ortholog1 ↔ 1
21(1794705-1800202) 21(1602919-1689003)
fruit fly (Drosophila melanogaster)
Insecta
da3
oogenesis transcription factor
78(a)
 
--
worm (Caenorhabditis elegans)
Secernentea
hlh-26
Helix Loop Helix family member (hlh-2)
25(a)
1 → many
I(7190846-7193914)
ENSEMBL Gene Tree for TCF4 (if available)TreeFam Gene Tree for TCF4 (if available)
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Paralogsfor TCF4 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for TCF4 gene TCF12 2 TCF3 2 18/69 SIMAP similar genes for TCF4 using alignment to 34 protein entries: ITF2_HUMAN (see all proteins )
(see all similar genes ):EML2 HOOK2 VPS33A CRCP NXPE2 DCTN5 DNAPTP3 TCF12 SH3PXD2A ZNF212 C4orf21 LAMB4 ZNF283 ZNF527 PLEKHH2 APOPT1 BTBD2 ERBB2
TCF4 for paralogs About GeneDecksing
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Genomic Variantsfor TCF4 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 18 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for TCF4 (52889562 - 53139562 bp, first 250kb of TCF4)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 3 variations for TCF4 3 CNVs : 102673 1980 102672 Human Gene Mutation Database (HGMD) : TCF4 Locus Specific Mutation Databases (LSDB): TCF4 SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing TCF4
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Disorders
/ Diseasesfor TCF4 gene
(in which this Gene is Involved, According to MalaCards ,
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and/or TGDB .)
About This Section
TCF4 for disorders About GeneDecksing OMIM gene information: 602272 OMIM disorders : 610954 UniProtKB/Swiss-Prot: ITF2_HUMAN, P15884
Defects in TCF4 are a cause of Pitt-Hopkins syndrome (PTHS) [MIM:610954]. PTHS is a rare syndromic encephalopathy characterized by severe psychomotor delay, epilepsy, daily bouts of diurnal hyperventilation starting in infancy, mild postnatal growth retardation, postnatal microcephaly, and distinctive facial features. Since most hitherto reported cases have been sporadic, with males and females equally affected, PTHS is regarded as an autosomal dominant condition 20/47 diseases for TCF4 (see all 47 ): About MalaCards pitt-hopkins syndrome fuchs' endothelial dystrophy familial adenomatous polyposis adenomatous polyposis coli autonomic dysfunction corneal dystrophy esophageal squamous cell carcinoma squamous cell carcinoma polyposis endometrial carcinoma tauopathy renal cell carcinoma bipolar disorder pituitary tumor hepatocellular carcinoma carcinoma colon cancer gastric cancer microcephaly colorectal cancer 1 disease from the University of Copenhagen DISEASES database for TCF4 :Fuchs' endothelial dystrophy 10/14 Novoseek disease relationships for TCF4 gene (see all 14 ) About this table
Disease
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
familial adenomatous polyposis
70.8
3
12460462 (1), 11396184 (1), 15342948 (1)
colon cancer
52.9
2
15667799 (1), 17167838 (1)
endometrial carcinoma
43
4
18798221 (2), 15806138 (1), 10597289 (1)
colorectal cancer
40.8
2
18439914 (1), 19376641 (1)
colorectal tumors
28.8
1
10597289 (1)
gastric cancer
27.9
13
18635522 (5), 16311123 (2), 10597289 (1)
cancer
24.7
1
15667799 (1)
hepatocellular carcinoma
21.6
6
14687479 (2), 15040893 (2), 12566320 (1)
microsatellite instability
20.9
1
10597289 (1)
tumors
14.9
16
15667799 (3), 16311123 (2), 10918391 (2), 18635522 (2) (see all 5 )
Human Genome Epidemiology (HuGE) Navigator: TCF4 (251 documents) Export disorders for TCF4 gene to outside databases
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Publicationsfor TCF4 gene (in
PubMed .
Associations of this gene to articles via
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6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for TCF4 gene, integrated from 9 sources (see all 212 ) (see top 10 ): (articles sorted by number of sources associating them with TCF4) Utopia : connect your pdf to the dynamic world of online information
A novel, heritable, expanding CTG repeat in an intron of the SEF2-1 gene on chromosome 18q21.1. (PubMed id 9302263) 1 , 2 , 3 Breschel T.S.... Ross C.A. (1997) Sequence of the cDNA encoding ITF-2, a positive-acting transcription factor. (PubMed id 2308860) 1 , 2 , 3 Henthorn P.... Kadesch T. (1990) Helix-loop-helix transcriptional activators bind to a sequence in glucocorticoid response elements of retrovirus enhancers. (PubMed id 1681116) 1 , 2 , 9 Corneliussen B.... Grundstroem T. (1991) Functional diversity of human basic helix-loop-helix transcription factor TCF4 isoforms generated by alternative 5' exon usage and s plicing. (PubMed id 21789225) 1 , 2 Sepp M....Timmusk T. (2011) Novel comprehensive diagnostic strategy in pitt-hopkins syndrome: Clinical score and further delineation of the TCF4 mutational spectrum. (PubMed id 22045651) 1 , 2 Whalen S.... Giurgea I. (2011) Mutational, functional, and expression studies of the TCF4 gene in Pitt-Hopkins syndrome. (PubMed id 19235238) 1 , 2 de Pontual L.... Amiel J. (2009) Mutations in TCF4, encoding a class I basic helix-loop-helix transcription factor, are responsible for Pitt-Hopkins syndrome, a severe epileptic encephalopathy associated with autonomic dysfunction. (PubMed id 17436254) 1 , 2 Amiel J.... Colleaux L. (2007) Haploinsufficiency of TCF4 causes syndromal mental retardation with intermittent hyperventilation (Pitt-Hopkins syndrome). (PubMed id 17436255) 1 , 2 Zweier C.... Rauch A. (2007) Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039) 1 , 2 Ota T.... Sugano S. (2004) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) Two distinct transcription factors that bind the immunoglobulin enhancer microE5/kappa 2 motif. (PubMed id 2105528) 1 , 2 Henthorn P.... Kadesch T. (1990) CpG methylation in exon 1 of transcription factor 4 increases with age in normal gastric mucosa and is associated with gene silencing in intestinal-type gastric cancers. (PubMed id 18635522) 1 , 9 Kim S.K....Kim Y.S. (2008) Development of human plasmacytoid dendritic cells depends on the combined action of the basic helix-loop-helix factor E2-2 and the Ets factor Spi-B. (PubMed id 18792017) 1 , 9 Nagasawa M....Blom B. (2008) HASH-1 and E2-2 are expressed in human neuroblastoma cells and form a functional complex. (PubMed id 10903890) 1 , 9 Persson P....Axelson H. (2000) Transcription factor E2-2 is an essential and specific regulator of plasmacytoid dendritic cell development. (PubMed id 18854153) 1 , 9 Cisse B....Reizis B. (2008) Disruption of the TCF4 gene in a girl with mental retardation but without the classical Pitt-Hopkins syndrome. (PubMed id 18627065) 1 , 9 Kalscheuer V.M....Ropers H.H. (2008) Short communication: RNA interference directed agains t Axin1 upregulates human immunodeficiency virus type 1 gene expression by acti vating the Wnt signaling pathway in HeLa-derived J111 cells. (PubMed id 19778269) 1 , 9 Kameoka M....Auwanit W. (2009) A negative regulatory element-dependent inhibitory role of ITF2B on IL-2 receptor alpha gene. (PubMed id 16126178) 1 , 9 Lu Y....Shen Y.F. (2005) Modulation of basic helix-loop-helix transcription complex formation by Id proteins during neuronal differentiation. (PubMed id 11756408) 1 , 9 Jogi A....Axelson H. (2002) Common variants conferring risk of schizophrenia. (PubMed id 19571808) 1 , 9 Stefansson H....Collier D.A. (2009) Further delineation of Pitt-Hopkins syndrome: phenotypic and genotypic description of 16 novel patients. (PubMed id 18728071) 2 , 9 Zweier C....Rauch A. (2008) Association of TCF4 and CLU polymorphisms with Fuchs' endothelial dystrophy and implication of CLU and TGFBI proteins in the disease p rocess. (PubMed id 22234156) 1 Kuot A....Burdon K.P. (2012) Genome-wide association study in a Swedish population yields support for greater CNV and MHC involvement in schizophrenia compared wit h bipolar disorder. (PubMed id 22688191) 1 Bergen S.E....Sullivan P.F. (2012) SPINDLIN1 promotes cancer cell proliferation through a ctivation of WNT/TCF-4 signaling. (PubMed id 22258766) 1 Wang J.X....Pei X.T. (2012) b-catenin inhibits promyelocytic leukemia protein tumo r suppressor function in colorectal cancer cells. (PubMed id 22155184) 1 Satow R....Yamada T. (2012) The TCF4/b-catenin pathway and chromatin structure coo perate to regulate D-glucuronyl C5-epimerase expression in breast cancer. (PubMed id 22805760) 1 Mostovich L.A....Grigorieva E.V. (2012) Role of b-catenin and TCF/LEF family members in transc riptional activity of HIV in astrocytes. (PubMed id 22156527) 1 Narasipura S.D....Al-Harthi L. (2012) Transcription factor 4 and myocyte enhancer factor 2C mutations are not common causes of Rett syndrome. (PubMed id 22383159) 1 Armani R....Christodoulou J. (2012) KLF4 and SOX9 transcription factors antagonize b-caten in and inhibit TCF-activity in cancer cells. (PubMed id 22766303) 1 Sellak H....Lincoln T.M. (2012) Role of the TCF4 gene intronic variant in normal varia tion of corneal endothelium. (PubMed id 22146553) 1 Mackey D.A....Pennell C.E. (2012) Capsaicin represses transcriptional activity of b-cate nin in human colorectal cancer cells. (PubMed id 21764279) 1 Lee S.H....Baek S.J. (2012) Schizophrenia risk polymorphisms in the TCF4 gene inte ract with smoking in the modulation of auditory sensory gating. (PubMed id 22451930) 1 Quednow B.B....Winterer G. (2012) Kindlin 2 forms a transcriptional complex with b-caten in and TCF4 to enhance Wnt signalling. (PubMed id 22699938) 1 Yu Y....Zhang H. (2012) Pitt-Hopkins syndrome-associated mutations in TCF4 lea d to variable impairment of the transcription factor function ranging from hypom orphic to dominant-negative effects. (PubMed id 22460224) 1 Sepp M....Timmusk T. (2012) Sox4 functions as a positive regulator of b-catenin si gnaling through upregulation of TCF4 during morular differentiation of endometri al carcinomas. (PubMed id 22231735) 1 Saegusa M....Kuwata T. (2012) Identification of novel T cell factor 4 (TCF-4) bindin g sites on the HIV long terminal repeat which associate with TCF-4, b-catenin, a nd SMAR1 to repress HIV transcription. (PubMed id 22674979) 1 Henderson L.J....Al-Harthi L. (2012) Genome-wide association analysis in Primary sclerosing cholangitis and ulcerative colitis identifies risk loci at GPR35 and TCF4. (PubMed id 22821403) 1 Ellinghaus D....Karlsen T.H. (2012) Transcription factor TCF4 maintains the properties of human corneal epithelial stem cells. (PubMed id 22232078) 1 Lu R....Li D.Q. (2012) The role of the TCF4 gene in the phenotype of individ uals with 18q segmental deletions. (PubMed id 21671075) 1 Hasi M....Cody J.D. (2011) Association between TCF4 and schizophrenia does not e xert its effect by common nonsynonymous variation or by influencing cis-acting regulation of mRNA expression in adult human brain. (PubMed id 21812098) 1 Williams H.J....O'Donovan M.C. (2011) Genome-wide association study identifies five new schi zophrenia loci. (PubMed id 21926974) 1 (2011) I^-catenin/Tcf-4 complex transcriptionally regulates A KT1 in glioma. (PubMed id 21720709) 1 Chen L....Kang C. (2011) Common variants at VRK2 and TCF4 conferring risk of s chizophrenia. (PubMed id 21791550) 1 Steinberg S....Stefansson K. (2011) I^-catenin/TCF4 complex induces the epithelial-to-mese nchymal transition (EMT)-activator ZEB1 to regulate tumor invasiveness. (PubMed id 22080605) 1 SA!nchez-TillA^ E....Postigo A. (2011) Human FasL gene is a target of I^-catenin/T-cell facto r pathway and complex FasL haplotypes alter promoter functions. (PubMed id 22022540) 1 Wu J....Kimberly R.P. (2011) A directed protein interaction network for investigat ing intracellular signal transduction. (PubMed id 21900206) 1 Vinayagam A....Wanker E.E. (2011) Differential LEF1 and TCF4 expression is involved in melanoma cell phenotype switching. (PubMed id 21599871) 1 Eichhoff O.M....Hoek K.S. (2011) Association of TCF4 gene polymorphisms with Fuchs' co rneal dystrophy in the Chinese. (PubMed id 21659310) 1 Thalamuthu A....Vithana E.N. (2011) The schizophrenia risk allele C of the TCF4 rs9960767 polymorphism disrupts sensorimotor gating in schizophrenia spectrum and health y volunteers. (PubMed id 21543597) 1 Quednow B.B....Kumari V. (2011) Most genome-wide significant susceptibility loci for schizophrenia and bipolar disorder reported to date cross-traditional diagnosti c boundaries. (PubMed id 21037240) 1 Williams H.J....O'Donovan M.C. (2011) Novel schizophrenia risk gene TCF4 influences verbal learning and memory functioning in schizophrenia patients. (PubMed id 21228604) 1 Lennertz L....MAPssner R. (2011) Genome-wide meta-analysis for severe diabetic retinop athy. (PubMed id 21441570) 1 Grassi M.A....Nicolae D.L. (2011) Histone H4 Lys 20 monomethylation by histone methylas e SET8 mediates Wnt target gene activation. (PubMed id 21282610) 1 Li Z....Li L. (2011) Tumor-suppressive effects of psoriasin (S100A7) are me diated through the b-catenin/T cell factor 4 protein pathway in estrogen recepto r-positive breast cancer cells. (PubMed id 22016394) 1 Deol Y.S....Ganju R.K. (2011) Replication of the TCF4 intronic variant in late-onse t Fuchs corneal dystrophy and evidence of independence from the FCD2 locus. (PubMed id 21245398) 1 Riazuddin S.A....Gottsch J.D. (2011) Replication of TCF4 through association and linkage s tudies in late-onset Fuchs endothelial corneal dystrophy. (PubMed id 21533127) 1 Li Y.J....Afshari N.A. (2011) Silencing of the Wnt transcription factor TCF4 sensit izes colorectal cancer cells to (chemo-) radiotherapy. (PubMed id 21983179) 1 Kendziorra E....Grade M. (2011) Interference of E2-2-mediated effect in endothelial c ells by FAM96B through its limited expression of E2-2. (PubMed id 21722264) 1 Yang W....Kato M. (2011) System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation. (PubMed id 21406692) 2 Rigbolt K.T....Blagoev B. (2011) TIF1gamma controls erythroid cell fate by regulating transcription elongation. (PubMed id 20603019) 1 Bai X....Zon L.I. (2010) An atlas of combinatorial transcriptional regulation in mouse and man. (PubMed id 20211142) 1 Ravasi T....Hayashizaki Y. (2010) Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PubMed id 20379614) 1 Rose J.E....Uhl G.R. (2010) TCF4, schizophrenia, and Pitt-Hopkins Syndrome. (PubMed id 20421335) 1 Blake D.J....Owen M.J. (2010) CpG methylation of transcription factor 4 in gastric carcinoma. (PubMed id 20585880) 1 Joo J.K....Lee J.H. (2010) Pitt-Hopkins syndrome: report of a case with a TCF4 g ene mutation. (PubMed id 20205897) 1 Taddeucci G....Tarantino E. (2010) Global regulator SATB1 recruits beta-catenin and regu lates T(H)2 differentiation in Wnt-dependent manner. (PubMed id 20126258) 1 Notani D....Galande S. (2010) Common variants in major histocompatibility complex r egion and TCF4 gene are significantly associated with schizophrenia in Han Chin ese. (PubMed id 20673877) 1 Li T....Shi Y. (2010) E2-2 protein and Fuchs's corneal dystrophy. (PubMed id 20825314) 1 Baratz K.H....Edwards A.O. (2010) ITF2 is a target of CXCR4 in MDA-MB-231 breast cancer cells and is associated with reduced survival in estrogen receptor-negative br east cancer. (PubMed id 20603605) 1 Appaiah H....Nakshatri H. (2010) The ubiquitin specific protease 4 (USP4) is a new pla yer in the Wnt signalling pathway. (PubMed id 20141612) 1 Zhao B....Lindsten K. (2009) Common polygenic variation contributes to risk of sch izophrenia and bipolar disorder. (PubMed id 19571811) 1 (2009) Daxx positively modulates beta-catenin/TCF4-mediated transcriptional potential. (PubMed id 19563778) 1 Huang Y.S. and Shih H.M. (2009) The transcription factor ITF-2A induces cell cycle ar rest via p21(Cip1). (PubMed id 19635457) 1 Herbst A....Kolligs F.T. (2009) High-density association study of 383 candidate genes for volumetric BMD at the femoral neck and lumbar spine among older men. (PubMed id 19453261) 1 Yerges L.M....Zmuda J.M. (2009) ITF-2 is disrupted via allelic loss of chromosome 18q 21, and ITF-2B expression is lost at the adenoma-carcinoma transition. (PubMed id 19394332) 1 Herbst A....Kolligs F.T. (2009) Genotype-phenotype analysis of TCF4 mutations causing Pitt-Hopkins syndrome shows increased seizure activity with missense mutations . (PubMed id 19938247) 1 Rosenfeld J.A....Shaffer L.G. (2009) Deletion 18q21.2q21.32 involving TCF4 in a boy diagnosed by CGH-array. (PubMed id 18222743) 1 Andrieux J....Holder-Espinasse M. (2008) A conserved domain in the transcription factor ITF-2B attenuates its activity. (PubMed id 18371301) 1 Herbst A. and Kolligs F.T. (2008) Trabid, a new positive regulator of Wnt-induced transcription with preference for binding and cleaving K63-linked ubiquitin chains. (PubMed id 18281465) 1 Tran H.... Bienz M. (2008) Menin promotes the Wnt signaling pathway in pancreatic endocrine cells. (PubMed id 19074834) 1 Chen G....Sawicki M.P. (2008) Severe mental retardation with breathing abnormalities (Pitt-Hopkins syndrome) is caused by haploinsufficiency of the neuronal bHLH transcription factor TCF4. (PubMed id 17478476) 1 Brockschmidt A....Weber R.G. (2007) SOX6 suppresses cyclin D1 promoter activity by interacting with beta-catenin and histone deacetylase 1, and its down-regulation induces pancreatic beta-cell proliferation. (PubMed id 17412698) 1 Iguchi H....Sakai J. (2007) HER-2/neu transcriptionally activates Jab1 expression via the AKT/beta-catenin pathway in breast cancer cells. (PubMed id 17914096) 1 Hsu M.C....Hung W.C. (2007) CBP/p300 are bimodal regulators of Wnt signaling. (PubMed id 17410209) 1 Li J....Cadigan K.M. (2007) Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PubMed id 16344560) 1 Kimura K.... Sugano S. (2006) Parafibromin/Hyrax activates Wnt/Wg target gene transcription by direct association with beta-catenin/Armadillo. (PubMed id 16630820) 1 Mosimann C....Basler K. (2006) HIC1 attenuates Wnt signaling by recruitment of TCF-4 and beta-catenin to the nuclear bodies. (PubMed id 16724116) 1 Valenta T....Korinek V. (2006) NARF, an nemo-like kinase (NLK)-associated ring finger protein regulates the ubiquitylation and degradation of T cell factor/lymphoid enhancer factor (TCF/LEF). (PubMed id 16714285) 1 Yamada M.... Shibuya H. (2006) Wnt signaling inhibitors regulate the transcriptional response to morphogenetic Shh-Gli signaling in the neural tube. (PubMed id 16950124) 1 Lei Q....Matise M.P. (2006) ETO2 coordinates cellular proliferation and differentiation during erythropoiesis. (PubMed id 16407974) 1 Goardon N....Hoang T. (2006) Protein interaction screening by quantitative immunop recipitation combined with knockdown (QUICK). (PubMed id 17072306) 1 Selbach M. and Mann M. (2006) Essential role of T-cell factor/beta-catenin in regulation of Rad6B: a potential mechanism for Rad6B overexpression in breast cancer cells. (PubMed id 17050667) 1 Shekhar M.P....Gerard B. (2006) DNA sequence and analysis of human chromosome 18. (PubMed id 16177791) 2 Nusbaum C.... Lander E.S. (2005) Interaction of phosphorylated c-Jun with TCF4 regulates intestinal cancer development. (PubMed id 16007074) 1 Nateri A.S....Behrens A. (2005) Interaction between Smad7 and beta-catenin: importance for transforming growth factor beta-induced apoptosis. (PubMed id 15684397) 1 Edlund S....Landstrom M. (2005) SUMO-1 modification of PIASy, an E3 ligase, is necessary for PIASy- dependent activation of Tcf-4. (PubMed id 15831457) 1 Ihara M.... Kikuchi A. (2005) Activator protein 2alpha associates with adenomatous polyposis coli/beta-catenin and Inhibits beta-catenin/T-cell factor transcriptional activity in colorectal cancer cells. (PubMed id 15331612) 1 Li Q. and Dashwood R.H. (2004) E protein silencing by the leukemogenic AML1-ETO fusion protein. (PubMed id 15333839) 1 Zhang J....Roeder R.G. (2004) Differential cooperation between dHAND and three different E-proteins. (PubMed id 15351717) 1 Murakami M....Kurihara H. (2004) Hot spots in Tcf4 for the interaction with beta-catenin. (PubMed id 12657632) 1 Fasolini M....Knapp S. (2003) Sumoylation is involved in beta-catenin-dependent activation of Tcf- 4. (PubMed id 12727872) 1 Yamamoto H.... Kikuchi A. (2003) Functional localization and competition between the androgen receptor and T-cell factor for nuclear beta-catenin: a means for inhibition of the Tcf signaling axis. (PubMed id 12944908) 1 Mulholland D.J....Nelson C.C. (2003) Phosphorylation and regulation of beta-catenin by casein kinase I epsilon. (PubMed id 12417018) 1 Sakanaka C. (2002) Human Hand1 basic helix-loop-helix (bHLH) protein: extra-embryonic expression pattern, interaction partners and identification of its transcriptional repressor domains. (PubMed id 11802795) 1 Knofler M....Husslein P. (2002) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932) 1 Strausberg R.L....Marra M.A. (2002) A novel target recognition revealed by calmodulin in complex with the basic helix--loop--helix transcription factor SEF2-1/E2-2. (PubMed id 11266605) 1 Larsson G....Wijmenga S.S. (2001) Tcf4 can specifically recognize beta-catenin using alternative conformations. (PubMed id 11713475) 1 Graham T.A.... Xu W. (2001) Protein-protein interaction panel using mouse full-length cDNAs. (PubMed id 11591653) 1 Suzuki H....Hayashizaki Y. (2001) Negative regulation of the Wnt-beta-catenin pathway by the transcriptional repressor HBP1. (PubMed id 11500377) 1 Sampson E.M....Yee A.S. (2001) Structure of a human Tcf4-beta-catenin complex. (PubMed id 11713476) 1 Poy F.... Eck M.J. (2001) Sgn1, a basic helix-loop-helix transcription factor delineates the salivary gland duct cell lineage in mice. (PubMed id 11784080) 1 Yoshida S....Nabeshima Y. (2001) A novel type of calmodulin interaction in the inhibition of basic helix-loop-helix transcription factors. (PubMed id 10757985) 1 Onions J....Grundstrom T. (2000) Characterization of ABF-1, a novel basic helix-loop-helix transcription factor expressed in activated B lymphocytes. (PubMed id 9584154) 1 Massari M.E.... Murre C. (1998) A splice variant of E2-2 basic helix-loop-helix protein represses the brain-specific fibroblast growth factor 1 promoter through the binding to an imperfect E-box. (PubMed id 9668116) 1 Liu Y....Chiu I.M. (1998) SCL binds the human homologue of DRG in vivo. (PubMed id 9824680) 1 Zhao X.-F. and Aplan P.D. (1998) The role of E-proteins in B- and T-lymphocyte development. (PubMed id 9618760) 1 Bain G. and Murre C. (1998) Differential interactions of Id proteins with basic-helix-loop-helix transcription factors. (PubMed id 9242638) 1 Langlands K....Prochownik E.V. (1997) Physical and functional interactions between the transcriptional inhibitors Id3 and ITF-2b. Evidence toward a novel mechanism regulating muscle-specific gene expression. (PubMed id 8999959) 1 Chen B. and Lim R.W. (1997) Determinants of helix-loop-helix dimerization affinity. Random mutational analysis of SCL/tal. (PubMed id 8576241) 1 Goldfarb A.N....Shoham M. (1996) The helix-loop-helix transcription factor SEF-2 regulates the activity of a novel initiator element in the promoter of the human somatostatin receptor II gene. (PubMed id 8978694) 1 Pscherer A....Schule R. (1996) Pitt-Hopkins Syndrome (PubMed id 22934316) 1 Ardinger H.H....Saunders C.J. (1993) (PubMed id 17467953) 2 Axin downregulates TCF-4 transcription via beta-caten in, but not p53, and inhibits the proliferation and invasion of lung cancer cel ls. (PubMed id 20122174) 9 Yang L.H....Wang E.H. (2010) Expression of T cell factor-4 in non-small-cell lung cancer. (PubMed id 15667799) 9 Li C.Y....Wang E.H. (2005) Inhibition of endothelial cell activation by bHLH pro tein E2-2 and its impairment of angiogenesis. (PubMed id 20231428) 9 Tanaka A....Kato M. (2010) Ku70 and poly(ADP-ribose) polymerase-1 competitively regulate beta-catenin and T-cell factor-4-mediated gene transactivation: possible linkage of DNA damage recognition and Wnt signaling. (PubMed id 17283121) 9 Idogawa M....Yamada T. (2007) Transcription factor Egr1 acts as an upstream regulator of beta-catenin signalling through up-regulation of TCF4 and p300 expression during trans-differentiation of endometrial carcinoma cells. (PubMed id 18798221) 9 Saegusa M....Okayasu I. (2008) Upregulation of TCF4 expression as a transcriptional target of beta-catenin/p300 complexes during trans-differentiation of endometrial carcinoma cells. (PubMed id 15806138) 9 Saegusa M....Okayasu I. (2005) Alterations of beta-catenin and Tcf-4 instead of GSK-3beta contribute to activation of Wnt pathway in hepatocellular carcinoma. (PubMed id 14687479) 9 Cui J....Romeih M. (2003) Regulation of Wnt signaling by the nuclear pore complex. (PubMed id 18439914) 9 Shitashige M....Yamada T. (2008) Nuclear translocations of beta-catenin and TCF4 in gastric cancers correlate with lymph node metastasis but probably not with CD44 expression. (PubMed id 16311123) 9 Chen X.Y....Liu J. (2005) Aberrant expression and function of TCF4 in the proliferation of hepatocellular carcinoma cell line BEL-7402. (PubMed id 15040893) 9 Zhao D.H....Li C.J. (2004) Id2 is a primary partner for the E2-2 basic helix-loop-helix transcription factor in the human placenta. (PubMed id 15249128) 9 Liu Y.P....Golos T.G. (2004) The transcriptional factor Tcf-4 contains different binding sites for beta-catenin and plakoglobin. (PubMed id 11711551) 9 Miravet S....Dunach M. (2002) HOXB13 is downregulated in colorectal cancer to confer TCF4-mediated transactivation. (PubMed id 15928669) 9 Jung C....Kao C. (2005) Wnt signaling in hepatocellular carcinoma: analysis of mutation and expression of beta-catenin, T-cell factor-4 and glycogen synthase kinase 3-beta genes. (PubMed id 12603528) 9 Cui J....Romeih M. (2003) beta-Catenin and plakoglobin N- and C-tails determine ligand specificity. (PubMed id 15381698) 9 Solanas G....Dunach M. (2004) The human T-cell factor-4 gene splicing isoforms, Wnt signal pathway, and apoptosis in renal cell carcinoma. (PubMed id 12796377) 9 Shiina H....Dahiya R. (2003) Variable mutation frequencies in coding repeats of TCF-4 and other target genes in colon, gastric and endometrial carcinoma showing microsatellite instability. (PubMed id 10597289) 9 Duval A....Hamelin R. (1999) HEB, a helix-loop-helix protein related to E2A and ITF2 that can modulate the DNA-binding ability of myogenic regulatory factors. (PubMed id 1312219) 9 Hu J.S.... Kingston R.E. (1992) The class I bHLH factors E2-2A and E2-2B regulate EMT. (PubMed id 19295128) 9 Sobrado V.R....Cano A. (2009) Characterization of sequences in human TWIST required for nuclear localization. (PubMed id 19534813) 9 Singh S. and Gramolini A.O. (2009) Poly(ADP-ribose) polymerase-1 is a component of the oncogenic T-cell factor-4/beta-catenin complex. (PubMed id 15940627) 9 Idogawa M....Hirohashi S. (2005) Evolution of vertebrate E protein transcription factors: comparative analysis of the E protein gene family in Takifugu rubripes and humans. (PubMed id 15713784) 9 Hikima J....Warr G.W. (2005) Ligand activation of peroxisome proliferator-activated receptor gamma induces apoptosis of leukemia cells by down-regulating the c-myc gene expression via blockade of the Tcf-4 activity. (PubMed id 11973610) 9 Yamakawa-Karakida N....Nakazawa S. (2002) TAL1/SCL relieves the E2-2-mediated repression of VEGFR2 promoter activity. (PubMed id 19029143) 9 Tanaka A....Kato M. (2009) Agelastatin A: a novel inhibitor of osteopontin-mediated adhesion, invasion, and colony formation. (PubMed id 18347142) 9 Mason C.K....El-Tanani M. (2008) E-box protein E2-2 is a crucial regulator of plasmacytoid DC development. (PubMed id 18792016) 9 Esashi E. and Liu Y.J. (2008) BMPs restrict the position of premuscle masses in the limb buds by influencing Tcf4 expression. (PubMed id 17005177) 9 Bonafede A....Brand-Saberi B. (2006) Regulation of human neurotropic JCV in colon cancer c ells. (PubMed id 16619477) 9 Enam S....Khalili K. (2006) Quercetin, a potent inhibitor against beta-catenin/Tcf signaling in SW480 colon cancer cells. (PubMed id 15670774) 9 Park C.H....Yang C.H. (2005) APC 3 x 15 beta-catenin-binding domain potentiates beta-catenin association to TBP and upregulates TCF-4 transcriptional activity. (PubMed id 13679048) 9 Roura S....Dunach M. (2003) Nitric oxide-donating aspirin inhibits beta-catenin/T cell factor (TCF) signaling in SW480 colon cancer cells by disrupting the nuclear beta-catenin-TCF association. (PubMed id 14566053) 9 Nath N....Rigas B. (2003) Regulation of cyclooxygenase-2 expression by the Wnt and ras pathways. (PubMed id 12566320) 9 Araki Y....Harris C.C. (2003) Reconstructed beta-catenin/TCF4 signaling in yeast applicable to functional evaluation of APC mutations. (PubMed id 14633595) 9 Yamada H....Katoh H. (2003) Epstein-Barr virus latent membrane protein-1 effects on junctional plakoglobin and induction of a cadherin switch. (PubMed id 19584275) 9 Shair K.H....Raab-Traub N. (2009) Silencing mediator for retinoid and thyroid hormone receptor and nuclear receptor corepressor attenuate transcriptional activation by the beta-catenin-TCF4 complex. (PubMed id 18632669) 9 Song L.N. and Gelmann E.P. (2008) Acetylation of beta-catenin by p300 regulates beta-catenin-Tcf4 interaction. (PubMed id 15060161) 9 Levy L....Neuveut C. (2004) Plakoglobin (gamma-catenin) has TCF/LEF family-dependent transcriptional activity in beta-catenin-deficient cell line. (PubMed id 14661054) 9 Maeda O....Sekido Y. (2004) Casein kinase I epsilon enhances the binding of Dvl-1 to Frat-1 and is essential for Wnt-3a-induced accumulation of beta-catenin. (PubMed id 12556519) 9 Hino S.... Kikuchi A. (2003) Transcriptional regulation of osteopontin and the metastatic phenotype: evidence for a Ras-activated enhancer in the human OPN promoter. (PubMed id 12650610) 9 Denhardt D.T....Rittling S.R. (2003) Fibroblast growth factor-2 induces Lef/Tcf-dependent transcription in human endothelial cells. (PubMed id 12235165) 9 Holnthoner W....Petzelbauer P. (2002) Role of beta-catenin/T-cell factor-regulated genes in ovarian endometrioid adenocarcinomas. (PubMed id 11943708) 9 Zhai Y....Cho K.R. (2002) Enhanced expression of cyclooxygenase-2 and nuclear beta-catenin are related to mutations in the APC gene in human colorectal cancer. (PubMed id 11396184) 9 Dimberg J....Soderkvist P. (2001) Heregulin induces expression, DNA binding activity, and transactivating functions of basic leucine zipper activating transcription factor 4. (PubMed id 10667576) 9 Talukder A.H....Kumar R. (2000) Overlapping expression of early B-cell factor and basic helix-loop-helix proteins as a mechanism to dictate B-lineage-specific activity of the lambda5 promoter. (PubMed id 10779354) 9 Sigvardsson M. (2000) Somatic frameshift alterations in mononucleotide repeat-containing genes in different tumor types from an HNPCC family with germline MSH2 mutation. (PubMed id 10918391) 9 Planck M....Nilbert M. (2000) Functional replacement of the mouse E2A gene with a human HEB cDNA. (PubMed id 9584174) 9 Zhuang Y....Dai M. (1998) Identification of c-MYC as a target of the APC pathway. (PubMed id 9727977) 9 He T.-C.... Kinzler K.W. (1998) [The possibility of regenerative medicine for myocard ial infarction and ischemic cardiomyopathy by using several stem cells] (PubMed id 20387569) 9 Egashira T. and Fukuda K. (2010) A STAT4 risk allele is associated with ischaemic cere brovascular events and anti-phospholipid antibodies in systemic lupus erythemat osus. (PubMed id 19762360) 9 Svenungsson E....RAPnnblom L. (2010) Generation of iPSCs from cultured human malignant cel ls. (PubMed id 20233975) 9 Carette J.E....Brummelkamp T.R. (2010) Effects of potential calcium sensing receptor inducer s on promoting chemosensitivity of human colon carcinoma cells. (PubMed id 20428782) 9 Wang X....Liu G. (2010) Silibinin suppresses growth of human colorectal carci noma SW480 cells in culture and xenograft through down-regulation of beta-caten in-dependent signaling. (PubMed id 20454513) 9 Kaur M....Agarwal R. (2010) Activator protein 2alpha suppresses intestinal tumori genesis in the Apc(min) mouse. (PubMed id 19376641) 9 Li Q....Dashwood R.H. (2009) Repression of tau hyperphosphorylation by chronic end urance exercise in aged transgenic mouse model of tauopathies. (PubMed id 19360903) 9 Leem Y.H....Han P.L. (2009) Cardiac regenerative medicine. (PubMed id 18772528) 9 Yuasa S. and Fukuda K. (2008) Gamma-secretase-dependent and -independent effects of presenilin1 on beta-catenin.Tcf-4 transcriptional activity. (PubMed id 19114997) 9 Raurell I....DuA+ach M. (2008) Wnt10b induces chemotaxis of osteosarcoma and correlates with reduced survival. (PubMed id 18465804) 9 Chen K....Uren A. (2008) The physiological and pharmacological basis for the ergogenic effects of androgens in elite sports. (PubMed id 18385897) 9 Choong K....Bhasin S. (2008) Interaction between beta-catenin and HIF-1 promotes cellular adaptation to hypoxia. (PubMed id 17220880) 9 Kaidi A....Paraskeva C. (2007) Involvement of splicing factor-1 in beta-catenin/T-cell factor-4-mediated gene transactivation and pre-mRNA splicing. (PubMed id 17383426) 9 Shitashige M....Yamada T. (2007) A functional role of Cdx2 in beta-catenin signaling during transdifferentiation in endometrial carcinomas. (PubMed id 17468517) 9 Saegusa M....Okayasu I. (2007) Physical and functional cooperation between AP-1 and beta-catenin for the regulation of TCF-dependent genes. (PubMed id 17146436) 9 Toualbi K....Bernuau D. (2007) Wnt expression and canonical Wnt signaling in human bone marrow B lymphopoiesis. (PubMed id 16808837) 9 Dosen G.... Rian E. (2006) Effects of gastrin 17 on beta-catenin/Tcf-4 pathway in Colo320WT colon cancer cells. (PubMed id 17167838) 9 Cao J....Yu H.G. (2006) Inhibition of protein-protein interactions: the discovery of druglike beta-catenin inhibitors by combining virtual and biophysical screening. (PubMed id 16568448) 9 Trosset J.Y....Moll J.K. (2006) Re-expression of the retinoblastoma-binding protein 2-homolog 1 reveals tumor-suppressive functions in highly metastatic melanoma cells. (PubMed id 16645588) 9 Roesch A....Vogt T. (2006) Presenilin-1 interacts with plakoglobin and enhances plakoglobin-Tcf-4 association. Implications for the regulation of beta-catenin/Tcf-4-dependent transcription. (PubMed id 16306047) 9 Raurell I....Dunach M. (2006) Proteomic analysis of individual human embryos to ide ntify novel biomarkers of development and viability. (PubMed id 16412738) 9 Katz-Jaffe M.G....Schoolcraft W.B. (2006) Overexpression of human pituitary tumor transforming gene (hPTTG), is regulated by beta-catenin /TCF pathway in human esophageal squamous cell carcinoma. (PubMed id 15514942) 9 Zhou C....Xu N. (2005) Wnt breakers in colon cancer. (PubMed id 14749120) 9 Clevers H. (2004) Expression profiling and functional analysis of wnt signaling mechanisms in mesenchymal stem cells. (PubMed id 15342948) 9 Etheridge S.L....Genever P.G. (2004) Targeted degradation of beta-catenin by chimeric F-box fusion proteins. (PubMed id 14706645) 9 Liu J....White R.L. (2004) Survival and proliferation factors of normal and malignant plasma cells. (PubMed id 12953803) 9 Klein B....Rossi J.F. (2003)
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About This Section Patent Information for TCF4 gene: Search GeneIP for patents involving TCF4 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor TCF4 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
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Browse OriGene Antibodies OriGene shRNA RFP for TCF4 OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for TCF4 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for TCF4 OriGene Protein Over-expression Lysate for TCF4 Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for TCF4 OriGene 3'-UTR Clone for TCF4 OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for TCF4 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for TCF4 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs OriGene Purified Protein for TCF4 OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
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