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TCF3 Gene

protein-coding   GIFtS: 65

GC19M001560
transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
Services    
(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc , and/or 7Ensembl, 8miRBase)
About This Section

Aliases
E2A 1, 2, 3, 5
ITF1 1, 2, 3
MGC129647 1, 2
MGC129648 1, 2
TCF-3 3
VDIR 1, 2
bHLHb21 1, 2
Descriptions
E2A immunoglobulin enhancer-binding factor E12/E47 2
Immunoglobulin enhancer-binding factor E12/E47 3
Immunoglobulin transcription factor 1 2, 3
Kappa-E2-binding factor 2, 3
Transcription factor 3 2, 3
Transcription factor ITF-1 3
VDR interacting repressor 2
transcription factor 3 (E2A immunoglobulin enhancer binding
factors E12/E47) 2
transcription factor E2-alpha 2
External Ids
HGNC: 116331
Entrez Gene: 69292
UniProtKB: P159233
Ensembl: ENSG000000715647
Search outside databases for aliases for TCF3 gene

Previous GC identifers: GC19M001671 GC19M001549

(According to Entrez Gene, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

UniProtKB/Swiss-Prot: TFE2_HUMAN, P15923
Function: Heterodimers between TCF3 and tissue-specific basic helix-loop-helix (bHLH) proteins play
major roles in determining tissue-specific cell fate during embryogenesis, like muscle or early
B-cell differentiation. Dimers bind DNA on E-box motifs: 5'-CANNTG-3'. Binds to the kappa-E2 site
in the kappa immunoglobulin gene enhancer

Gene Wiki entry for TCF3

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to UCSC and Ensembl, Transcription factor binding sites according to SABiosciences)
About This Section

Genomic View:
UCSC Golden Path with GeneCards custom track

 Transcription factor binding sites upstream to the TCF3 gene  

Entrez Gene cytogenetic band: 19p13.3   Ensembl cytogenetic band:  19p13.3   HGNC cytogenetic band: 19p13.3

TCF3 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)

GeneLoc gene densities for chromosome 19         GeneLoc Exon Structure

GeneLoc location for GC19M001560:     (about GC identifiers)

Start:
1,560,293 bp from pter
End:
1,601,277 bp from pter
Size:
40,985 bases
Orientation:
minus strand
RefSeq DNA sequence:
NC_000019.8  NT_011255.14  
(According to 1UniProtKB, and/or Ensembl, Phosphorylation sites according to 2Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Enzo Life Sciences, Abnova, OriGene and/or, Abcam,
Biochemical Assays by Invitrogen, Millipore, R&D Systems, Cell Signaling Technology, and/or Enzo Life Sciences, Ontologies according to Gene Ontology Consortium 01 Apr 2009 and Entrez Gene, Antibodies by Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Cell Signaling Technology, Abcam, Abnova, and/or Novus Biologicals)
About This Section

UniProtKB/Swiss-Prot: TFE2_HUMAN, P15923 (See protein sequence)
Recommended Name: Transcription factor E2-alpha  
Size: 654 amino acids; 67600 Da
Subunit: Efficient DNA binding requires dimerization with another bHLH protein. Forms a heterodimer
with ASH1 and TWIST2. Isoform E12 interacts with GRIPE and FIGLA (By similarity). Interacts with
PTF1A and TGFB1I1. Component of a nuclear TAL-1 complex composed at least of CBFA2T3, LDB1, TAL1
and TCF3 (By similarity). Interacts with UBE2I
Subcellular location: Nucleus
PDB structures from and Proteopedia :
1HLH (3D)    
Secondary accessions: P15883 Q14208 Q14635 Q14636 Q2TB40 Q9UPI9
Alternative splicing: 2 isoforms:  P15923-1   P15923-2   

Post-translational modifications:

  • Phosphorylated following NGF stimulation (By similarity)1
  • View phosphorylation sites using PhosphoSite2


  • REFSEQ proteins (2 alternative transcripts): 
    NP_001129611.1  NP_003191.1  


    ENSEMBL proteins: 
    ENSP00000378813 ENSP00000262965 ENSP00000344375 


    Human Recombinant Proteins 
    Browse Drug Discovery Central at Invitrogen for human recombinant proteins
    Browse Purified and Recombinant Proteins at Millipore
    Browse Human Recombinant Proteins at Sigma-Aldrich  
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Recombinant Proteins from Abcam (TCF3 / E2A, T Cell Factor 3 + 4)
    Human Recombinant Proteins from Abnova (TCF3)
                  OriGene Purified Recombinant Human Protein: TCF3 

    1 Gene Ontology (GO) cellular component term (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634 nucleus NAS2493990
    About this table

    Antibodies for TCF3: 
    Invitrogen Antibodies for TCF3
    Millipore Mono- and Polyclonal Antibodies for the study of TCF3
    Sigma-Aldrich Antibodies for TCF3
    Browse R&D Systems for Antibodies
    Cell Signaling Technology (CST) Antibodies for TCF3 
    Antibodies from Abcam (TCF3 / E2A, T Cell Factor 3 + 4), each with their AbpromiseSM
    Monoclonal and Polyclonal Antibodies from Abnova (TCF3)
    Novus Biologicals Antibodies for TCF3

    Assays for TCF3: 
    Browse Invitrogen for biochemical assays
    Millipore Kits and Assays for the Analysis of TCF3
    Browse R&D Systems for biochemical assays
    Browse biochemical assays available from Enzo Life Sciences

    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    2 InterPro domains/families:
     IPR001092 HLH_basic
     IPR011598 HLH_DNA_bd


       GeneDecks  TCF3 for the domains selected above  
    About GeneDecksing

    Graphical View of Domain Structure for InterPro Entry P15923

    ProtoNet protein and cluster: P15923

    1 Blocks protein family: IPB001092 Basic helix-loop-helix dimerization domain bHLH

    UniProtKB/Swiss-Prot: TFE2_HUMAN, P15923
    Similarity: Contains 1 basic helix-loop-helix (bHLH) domain

    (According to MGI Jun 06 2009, UniProtKB, IUBMB,and/or Genatlas,
    shRNA from OriGene, Sigma-Aldrich, RNAi from Sigma-Aldrich,
    RNAi Products, Clones, and Q-PCR Products from Invitrogen, Millipore, OriGene, and/or Abnova, siRNAs from Applied Biosystems, SYBR primers from OriGene, Cell-based Assays from Millipore, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (TCF3)
    Browse for Gene Knock-down Tools from Millipore
    Abnova Chimera RNAi Products for Gene knock-down (TCF3)
                   OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2): NM_001136139

                  Applied Biosystems Silencer® siRNAs for TCF3

                  Sigma-Aldrich siRNA for TCF3  
                         Sigma-Aldrich shRNA Panels and shRNA for TCF3  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Clones:Browse Clone Ranger at Invitrogen for clones
    Browse Clones for the Expression of Recombinant Proteins Available from Millipore
                   OriGene GFP tagged cDNA clones in CMV expression vector (see all 2): NM_001136139
                                     Myc/DDK tagged cDNA clones in CMV expression vector (see all 2): NM_001136139
                                     untagged cDNA clones in CMV expression vector (see all 2): NM_001136139 

    Primers: Browse Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers
                  OriGene genome-wide validated SYBR primer pairs: NM_003200

    UniProtKB/Swiss-Prot: TFE2_HUMAN, P15923
    Function: Heterodimers between TCF3 and tissue-specific basic helix-loop-helix (bHLH) proteins play
    major roles in determining tissue-specific cell fate during embryogenesis, like muscle or early
    B-cell differentiation. Dimers bind DNA on E-box motifs: 5'-CANNTG-3'. Binds to the kappa-E2 site
    in the kappa immunoglobulin gene enhancer

    Genatlas biochemistry entry for TCF3:
    transcription factor 3,heterodimerizing with all myogenic bHLH vproteins and binding DNA
    cooperatively with PBXs/MEISs/PKNOX1

    12 MGI mutant phenotypes (inferred from 13 alleles(MGI details for Tcf3):

    cellulargrowth/sizehematopoietic systemimmune systemlethality-postnatal
    life span-post-weaning/aginglimbs/digits/tailnervous systemnormalrenal/urinary system
    reproductive systemtumorigenesis

    4 Gene Ontology (GO) molecular function terms (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003700 transcription factor activity NAS2493990
    GO:0042803 protein homodimerization activity IDA10958665
    GO:0043425 bHLH transcription factor binding IPI10545951
    GO:0046982 protein heterodimerization activity NAS2105528
    About this table

    (Pathways according to Invitrogen (maps by GeneGo), Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB,
    Sets of similar genes according to GeneDecks, Proteins Network according to SABiosciences, Interactions according to 1UniProtKB, 2MINT, and/or 3STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section


    1 Millipore Pathway for TCF3
     Selected targets of CREB1

       GeneDecks  TCF3 for the pathways selected above  
    About GeneDecksing

    3 Sigma-Aldrich "Your Favorite Gene" Pathways for  TCF3  (Your Favorite Gene powered by Ingenuity) 
     Molecular Mechanisms of Cancer
     Wnt/&beta
     Acute Phase Response Signaling

       GeneDecks  TCF3 for the pathways selected above  
    About GeneDecksing

     Gene Network CentralTM Interacting Genes and Proteins Network for  TCF3 


    5/126 Interacting proteins for TCF3 (ENSP000002629653 P159231) via UniProtKB, MINT, and/or STRING (see all 126 )
    InteractantInteraction Details
    GeneCardExternal ID(s)
    ASCL1P505531STRING (score=.761) EBI-769630, EBI-957042
    ID2Q023631STRING (score=.996) EBI-769645, EBI-713450
    MYOD1P151721STRING (score=.999) EBI-769645, EBI-488878
    CCNDBP1O952731EBI-769645, EBI-748961
    TCF3P159231EBI-769645, EBI-769645
    About this table

    2 Gene Ontology (GO) biological process terms (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0002326 B cell lineage commitment NAS12435739
    GO:0045893 positive regulation of transcription, DNA-dependent IDA2105528
    About this table
    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
    About This Section

    Browse drugs & compounds from Enzo Life Sciences
    Browse Small Molecules at Sigma-Aldrich

    Browse Tocris compounds for TCF3

    (GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 219 Homo sapiens; Jun 2 2009) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView,
    non coding RNAs according to RNAdb,
    ESTs according to GeneTide,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from Invitrogen, Millipore, and/or Abnova,
    siRNAs from Applied Biosystems, Sigma-Aldrich,
    shRNA from Sigma-Aldrich, OriGene,
    Tagged/untagged cDNA clones from OriGene,
    Expression Assays from Applied Biosystems)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (TCF3)
    Browse for Gene Knock-down Tools from Millipore
    Abnova Chimera RNAi Products for Gene knock-down (TCF3)
                   OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2): NM_001136139

                  Sigma-Aldrich siRNA for TCF3  
                         Sigma-Aldrich shRNA Panels and shRNA for TCF3  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Applied Biosystems Silencer® siRNAs: 

    NM_001136139  NM_003200  

    REFSEQ mRNAs for TCF3 gene (2 alternative transcripts): 

    NM_001136139.1   NM_003200.2   

    Applied Biosystems TaqMan ® Gene Expression Assays: 

    NM_001136139  NM_003200  

                   OriGene GFP tagged cDNA clones in CMV expression vector (see all 2): NM_001136139
                                     Myc/DDK tagged cDNA clones in CMV expression vector (see all 2): NM_001136139
                                     untagged cDNA clones in CMV expression vector (see all 2): NM_001136139 

    Additional cDNA sequence: 

    AK024806.1 AK310998.1 AL117663.1 AY311345.1 BC005166.2 BC011665.2 BC014680.1 BC110580.1 
    EU155120.1 M24404.1 M24405.1 M31222.1 M31523.1 M65214.1 X52078.1 

    24/30 DOTS entries (see all 30 ):

    DT.454302  DT.92019877  DT.119679  DT.91793901  DT.40133480  DT.95150823  DT.100867319  DT.91982919 
    DT.100647180  DT.97862408  DT.91971358  DT.121441891  DT.100647174  DT.91991861  DT.101960616  DT.121441845 
    DT.97811535  DT.121441872  DT.87078345  DT.91770899  DT.92030806  DT.92335324  DT.100710233  DT.102839502 

    24/423 AceView cDNA sequences (see all 423 ):

    AW575617 BE217951 AW467799 M65214 AI379099 BE782875 AW664917 AA417032 
    R71755 AI202041 BQ029880 AW291864 M24404 BF342764 AW007720 AA354346 
    BM771545 BQ707450 R72653 CF887518 BU631013 BQ929289 AW410957 AI983613 

    highest scoring ESTs for TCF3:

    M31523 BQ068134 BX400804 CD516687 M65214 AA176379 AA210757 AA251176 AA251379 AA284958 

    Unigene Cluster for TCF3:

    Transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)
    Hs.371282  [show with all ESTs]
    Unigene Representative Sequence: NM_003200


    GeneLoc Exon Structure

    5/21 Alternative Splicing Database (ASD) splice patterns (SP) for TCF3 (see all 21 )

    ExUns: 1 ^ 2a · 2b · 2c ^ 3 ^ 4 ^ 5 ^ 6a · 6b ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14 ^ 15 ^ 16 ^ 17a · 17b · 17c ^ 18a · 18b · 18c · 18d ·
    SP1:                                                  -                                                                                                         
    SP2:                                                                                                                                                            
    SP3:                                                                                                                                                            
    SP4:                                -     -     -     -                                                                                                         
    SP5:                                                                                                                                                            

    ExUns: 18e · 18f ^ 19a · 19b ^ 20a · 20b · 20c · 20d ^ 21a · 21b · 21c · 21d · 21e · 21f · 21g ^ 22a · 22b · 22c ^ 23 ^ 24a · 24b · 24c
    SP1:                          -     -     -     -                                                                                       
    SP2:              -     -     -                                               -     -     -     -     -     -                           
    SP3:                          -     -     -     -                                                                                       
    SP4:                                                                                                                                    
    SP5:                                                                                                                                    

    About this scheme

    ECgene alternative splicing isoforms for TCF3

    3 Ensembl transcripts including schematic representations:
    ENST00000395423  ENST00000262965  ENST00000344749  
    (Experimental results according to 1GeneNote and GNF BioGPS,
    probe sets-to-genes annotations according to 2GeneAnnot , 3GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 219 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
    Expression Assays from Applied Biosystems )
    About This Section

    TCF3 expression in normal and diseased human tissues

     Applied Biosystems TaqMan ® Gene Expression Assays for TCF3

    1 / 2 / 3

    19 probe-sets matching TCF3 gene


    Affymetrix
    probe-set
    Array  GeneAnnot data GeneNote data GeneTide data
    # genes Sensitivity Specificity Correlation Length Gb_Accession Consensus Uniqueness Score Rank
    32874_at2, 3 U95-A 1 1.00 1.00 0.88 0.83 M65214 0.80 1.00 0.91 1
    1373_at2, 3 U95-A 1 1.00 1.00 0.98 1.07 M31523 1.00 1.00 1.00 1
    1374_g_at2, 3 U95-A 1 1.00 1.00 0.91 1.11 M31523 1.00 1.00 1.00 1

    213811_x_at2, 3 U133-A 1 1.00 1.00 -- -- AW062341 0.20 1.00 0.72 1

    209152_s_at2, 3 U133-A 1 1.00 1.00 -- -- AI655986 0.40 1.00 0.76 1

    215260_s_at2, 3 U133-A 1 1.00 1.00 -- -- X52078 0.60 1.00 0.82 1

    213730_x_at2, 3 U133-A 1 1.00 1.00 -- -- BE962186 0.60 1.00 0.82 1

    209153_s_at2, 3 U133-A 1 1.00 1.00 -- -- M31523 1.00 1.00 1.00 1

    209151_x_at2, 3 U133-A 2 1.00 0.95 -- -- AA768906 0.60 1.00 0.82 1

    210776_x_at2, 3 U133-A 3 1.00 0.86 -- -- M31222 0.60 1.00 0.82 1

    233358_at*2, 3 U133-B 47 1.00 0.02 -- -- AK024373 0.20 0.01 0.14 3

    213811_x_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

    209152_s_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

    215260_s_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

    213730_x_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

    209153_s_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

    209151_x_at2 U133Plus2 2 1.00 0.95 -- -- -- -- -- -- --

    210776_x_at2 U133Plus2 3 1.00 0.86 -- -- -- -- -- -- --

    233358_at*2 U133Plus2 47 1.00 0.02 -- -- -- -- -- -- --
    GeneDecks  TCF3 for binary patterns associated with the probe-sets selected above  
    About GeneDecksing
    About this table    
    Data from (Publications) and GNF BioGPS
        About these images
    About these images

    CGAP SAGE TAG: GTAGATGCAA

    SOURCE GeneReport for Unigene cluster: Hs.371282

    Expression variation in blood from EXPOLDB for TCF3

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD and/or 5MGI Jun 06 2009, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
    About This Section


    Orthologs for TCF3 gene from 5/8 species (see all 8 )
    Organism Gene Locus Description Human
    Similarity
    NCBI accessions
    dog
    (Canis familiaris)
    TCF7L11   -- transcription factor 7-like 1 (T-cell specific, HMG-box) 85.68(n)
    84.79(a)
    485079  XM_542197.2  XP_542197.2 
    cow
    (Bos taurus)
    TCF31   -- similar to Transcription factor E2-alpha (Immunoglobulin more 84.72(n)
    85.51(a)
    530616  XM_609091.3  XP_609091.3 
    rat
    (Rattus norvegicus)
    Tcfe2a1   -- transcription factor E2a 79.97(n)
    80.59(a)
    171046  NM_001035237.1  NP_001030314.1 
    mouse
    (Mus musculus)
    Tcf35
    Tcfe2a1
    10 (43.00 cM)5
    transcription factor 35
    transcription factor E2a1
    80.23(n)1
    81.21(a)1
    214231  NM_011548.31  NP_035678.21 
     AA4084005  AB0956065  (see all 33)
    chicken
    (Gallus gallus)
    TCF31   -- transcription factor 3 (E2A immunoglobulin enhancer more 73.22(n)
    74.84(a)
    395146  NM_204486.2  NP_989817.2 
    About this table        Species with no ortholog for TCF3

    ENSEMBL Gene Tree for TCF3
    (Paralogs according to 1HomoloGene
    and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
    About This Section

    Paralogs for TCF3 gene
    TCF122  TCF42  

    Pseudogenes
    1 related pseudogene


    (According to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Genotyping Reagents from Applied Biosystems)
    About This Section


    10/355 NCBI SNPs in TCF3 are shown (see all 355 )
    (Click for Applied Biosystems TaqMan ® Genotyping Assay)  (see all 76)
    ABGenomic DataTranscription DataAllele Frequencies
    SNP IDValidChr 19 posSequenceRecsAA
    Chg
    TypeMoreRecsAllele
    freq
    PopTotal
    sample
    More
    ------------
    --
    rs118794021,2
    A,C,F,H1573372(+) GGCGGT/CGGCAT 2 A/T mis1 ese33Minor allele frequency- C:0.01EU EA 270
    rs10529181,2
    A,C,F1560669(-) CCCCTA/GCGCCC 2 -- ut311Minor allele frequency- G:0.21MN 184
    --
    rs10529541,2
    A,C,F1560435(-) AAAAAA/TTTTTT 2 -- ut311Minor allele frequency- T:0.34MN 184
    rs20748881,2
    C,H1566796(+) CGGCCG/ACCGTG 2 V/A mis1 ese32Minor allele frequency- A:0.00EA 178
    rs81031001,2
    A,C1561362(+) GCTGGC/TCAGGC 2 -- ut310--------
    rs353548741,2
    C,F1578365(-) CGGCCT/CGACTC 2 P/L mis11Minor allele frequency- C:0.04NA 70
    rs37461121,2
    F,H1561556(+) CTCCAG/AGGTGT 2 -- ut315Minor allele frequency- A:0.03EA EU WA 1922
    --
    rs10526921,2
    C,F1570350(-) TCACCG/AGCCCC 2 S/G mis1 ese31Minor allele frequency- A:0.07NA 72
    --
    rs118823591,2
    C1560267(+) CACCAA/GAAAGA 1 -- ng510--------
    rs149901,2
    C1562140(-) TGAAAA/CTTAGC 2 -- ut311Minor allele frequency- C:0.00MN 184
    About this table

    HapMap Linkage Disequilibrium images for TCF3 (up to first 250kb)

    (in which this Gene is Involved, According to OMIM, UniProtKB, Novoseek, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, HGMD, GAD, HuGE Navigator, BCGD, and/or TGDB.)
    About This Section

    OMIM: 147141

    UniProtKB/Swiss-Prot: TFE2_HUMAN, P15923

  • Chromosomal aberrations involving TCF3 are cause of forms of pre-B-cell acute
    lymphoblastic leukemia (B-ALL). Translocation t(1;19)(q23;p13.3) with PBX1; Translocation
    t(17;19)(q22;p13.3) with HLF. Inversion inv(19)(p13;q13) with TFPT
  • 3 Novoseek disease relationships for TCF3 gene

    Disease   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
    lymphoblastic leukemia acute 35.00 2 10490826 (1), 17311319 (1)
    tumors 0.00 3 12161427 (1), 17982455 (1), 17311319 (1)
    leukemia 0.00 2 15030166 (1), 10471746 (1)
    About this table

    1 PharmGKB disease relationship for TCF3 gene
    Disease PharmGKB Relations PubMed IDs for articles supporting these relationships
    Leukemia, Lymphocytic, Acute, L1FA  GN  12086872
    About this table

    Genatlas disease: TCF3
    acute lymphoblastic leukemia,pre-B cell,with translocation t(1;19)(q23;p13);see PBX1

    (Possibly Related Articles in Doctor's Guide)
    About This Section

      --

    (in PubMed. Associations of this gene to articles via 1Novoseek, 2HGNC, 3Entrez Gene, 4UniProtKB/Swiss-Prot, 5UniProtKB/TrEMBL, 6GAD, and/or 7PharmGKB)
    About This Section

    10/152 PubMed articles for TCF3 gene (see all 152 ):
    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section

     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)
    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, and/or H-InvDB)
    About This Section

    Entrez Gene: 6929 HGNC: 11633 AceView: TCF3 Ensembl:ENSG00000071564 euGenes: HUgn6929
    ECgene: TCF3 H-InvDB: TCF3
    (According to HUGE)
    About This Section

      --
    (According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section

    NameDescription
    ATLAS Chromosomes in Cancer entry for TCF3 Genetics and Cytogenetics in Oncology and Haematology
    (Available from WIS Yeda, Salk, Tufts)
    About This Section

      --
    (Reagents available from Applied Biosystems, Antibodies and assays by Cell Signaling Technology, Abcam, Novus Biologicals,
    Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
    Enzo Life Sciences, and/or Tocris Bioscience)
    About This Section



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