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Aliases for TCEANC2 Gene

Aliases for TCEANC2 Gene

  • Transcription Elongation Factor A (SII) N-Terminal And Central Domain Containing 2 2 3
  • C1orf83 3 4
  • Transcription Elongation Factor A N-Terminal And Central Domain-Containing Protein 2 3
  • Chromosome 1 Open Reading Frame 83 2

External Ids for TCEANC2 Gene

Previous Symbols for TCEANC2 Gene

  • C1orf83

Summaries for TCEANC2 Gene

GeneCards Summary for TCEANC2 Gene

TCEANC2 (Transcription Elongation Factor A (SII) N-Terminal And Central Domain Containing 2) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TCEANC2 Gene

Genomics for TCEANC2 Gene

Genomic Location for TCEANC2 Gene

54,053,587 bp from pter
54,112,519 bp from pter
58,933 bases
Plus strand

Genomic View for TCEANC2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TCEANC2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TCEANC2 Gene

No data available for Regulatory Elements for TCEANC2 Gene

Proteins for TCEANC2 Gene

  • Protein details for TCEANC2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Transcription elongation factor A N-terminal and central domain-containing protein 2
    Protein Accession:
    Secondary Accessions:
    • Q5T702
    • Q8N8N2

    Protein attributes for TCEANC2 Gene

    208 amino acids
    Molecular mass:
    24150 Da
    Quaternary structure:
    No Data Available
    • Sequence=CAI22668.1; Type=Erroneous initiation; Note=Translation N-terminally shortened.; Evidence={ECO:0000305};

    Alternative splice isoforms for TCEANC2 Gene


neXtProt entry for TCEANC2 Gene

Proteomics data for TCEANC2 Gene at MOPED

Post-translational modifications for TCEANC2 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for TCEANC2 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for TCEANC2 Gene

Domains for TCEANC2 Gene

Protein Domains for TCEANC2 Gene



  • Contains 1 TFIIS central domain.:
    • Q96MN5
  • Contains 1 TFIIS N-terminal domain.:
    • Q96MN5
  • Belongs to the TCEANC2 family.:
    • Q96MN5
genes like me logo Genes that share domains with TCEANC2: view

No data available for Gene Families for TCEANC2 Gene

Function for TCEANC2 Gene

Gene Ontology (GO) - Molecular Function for TCEANC2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003677 DNA binding IEA --
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with TCEANC2: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TCEANC2 Gene

Localization for TCEANC2 Gene

Subcellular locations from UniProtKB/Swiss-Prot for TCEANC2 Gene

Gene Ontology (GO) - Cellular Components for TCEANC2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with TCEANC2: view

Pathways for TCEANC2 Gene

SuperPathways for TCEANC2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TCEANC2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with TCEANC2: view

No data available for Pathways by source for TCEANC2 Gene

Transcripts for TCEANC2 Gene

mRNA/cDNA for TCEANC2 Gene

Unigene Clusters for TCEANC2 Gene

Transcription elongation factor A (SII) N-terminal and central domain containing 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TCEANC2 Gene

ExUns: 1a · 1b ^ 2a · 2b ^ 3 ^ 4 ^ 5a · 5b ^ 6a · 6b
SP1: - -
SP2: - - -
SP3: -

Relevant External Links for TCEANC2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for TCEANC2 Gene

mRNA expression in normal human tissues for TCEANC2 Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for TCEANC2 Gene

SOURCE GeneReport for Unigene cluster for TCEANC2 Gene Hs.558618

genes like me logo Genes that share expressions with TCEANC2: view

Orthologs for TCEANC2 Gene

This gene was present in the common ancestor of chordates.

Orthologs for TCEANC2 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia TCEANC2 36
  • 99.68 (n)
  • 99.52 (a)
  • 87 (a)
(Bos Taurus)
Mammalia TCEANC2 36
  • 93.11 (n)
  • 91.35 (a)
  • 90 (a)
(Canis familiaris)
Mammalia TCEANC2 36
  • 92.95 (n)
  • 90.38 (a)
  • 90 (a)
(Mus musculus)
Mammalia Tceanc2 36
  • 88.89 (n)
  • 91.3 (a)
Tceanc2 16
Tceanc2 37
  • 91 (a)
(Monodelphis domestica)
Mammalia TCEANC2 37
  • 83 (a)
(Ornithorhynchus anatinus)
Mammalia TCEANC2 37
  • 63 (a)
(Rattus norvegicus)
Mammalia Tceanc2 36
  • 86.47 (n)
  • 88.41 (a)
(Gallus gallus)
Aves TCEANC2 36
  • 70.67 (n)
  • 69.23 (a)
  • 69 (a)
(Anolis carolinensis)
Reptilia TCEANC2 37
  • 72 (a)
African clawed frog
(Xenopus laevis)
Amphibia Xl.5187 36
tropical clawed frog
(Silurana tropicalis)
Amphibia Str.17785 36
(Danio rerio)
Actinopterygii tceanc2 36
  • 63.93 (n)
  • 66.18 (a)
tceanc2 37
  • 65 (a)
Species with no ortholog for TCEANC2:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for TCEANC2 Gene

Gene Tree for TCEANC2 (if available)
Gene Tree for TCEANC2 (if available)

Paralogs for TCEANC2 Gene

No data available for Paralogs for TCEANC2 Gene

Variants for TCEANC2 Gene

Sequence variations from dbSNP and Humsavar for TCEANC2 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs950397 -- 54,063,853(-) ctgta(C/T)tgaac intron-variant
rs1015981 -- 54,077,649(-) cctag(C/T)AAATA intron-variant
rs1023094 -- 54,077,246(+) TTTCA(C/G)ACAAG intron-variant
rs1181087 -- 54,061,226(+) AGTGA(A/C)TTCCA intron-variant
rs1981039 -- 54,089,732(+) CAATT(A/T)TTTAT intron-variant

Relevant External Links for TCEANC2 Gene

HapMap Linkage Disequilibrium report

No data available for Structural Variations from Database of Genomic Variants (DGV) for TCEANC2 Gene

Disorders for TCEANC2 Gene

No disorders were found for TCEANC2 Gene.

No data available for UniProtKB/Swiss-Prot for TCEANC2 Gene

Publications for TCEANC2 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3
  4. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) OlA!h J. … OvA!di J. (J. Biol. Chem. 2011) 3
  5. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3

Products for TCEANC2 Gene

Sources for TCEANC2 Gene

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