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Aliases for TCEAL6 Gene

Aliases for TCEAL6 Gene

  • Transcription Elongation Factor A (SII)-Like 6 2 3
  • Transcription Elongation Factor S-II Protein-Like 6 3 4
  • TCEA-Like Protein 6 3 4
  • Transcription Elongation Factor A Protein-Like 6 3
  • Transcription Elongation Factor A (SII)-Like 3 3
  • Tceal3 3
  • WEX2 3

External Ids for TCEAL6 Gene

Previous GeneCards Identifiers for TCEAL6 Gene

  • GC0XM101202
  • GC0XM101281
  • GC0XM101394
  • GC0XM091203

Summaries for TCEAL6 Gene

GeneCards Summary for TCEAL6 Gene

TCEAL6 (Transcription Elongation Factor A (SII)-Like 6) is a Protein Coding gene. An important paralog of this gene is TCEAL3.

UniProtKB/Swiss-Prot for TCEAL6 Gene

  • May be involved in transcriptional regulation

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TCEAL6 Gene

Genomics for TCEAL6 Gene

Regulatory Elements for TCEAL6 Gene

Genomic Location for TCEAL6 Gene

102,139,961 bp from pter
102,142,970 bp from pter
3,010 bases
Minus strand

Genomic View for TCEAL6 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TCEAL6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TCEAL6 Gene

Proteins for TCEAL6 Gene

  • Protein details for TCEAL6 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Transcription elongation factor A protein-like 6
    Protein Accession:
    Secondary Accessions:
    • Q5H9J8

    Protein attributes for TCEAL6 Gene

    200 amino acids
    Molecular mass:
    22298 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for TCEAL6 Gene


neXtProt entry for TCEAL6 Gene

Proteomics data for TCEAL6 Gene at MOPED

Post-translational modifications for TCEAL6 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for TCEAL6 Gene

ENSEMBL proteins:
REFSEQ proteins:

Antibody Products

No data available for DME Specific Peptides for TCEAL6 Gene

Domains for TCEAL6 Gene

Protein Domains for TCEAL6 Gene


Suggested Antigen Peptide Sequences for TCEAL6 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry



  • Q6IPX3
  • Belongs to the TFS-II family. TFA subfamily.
genes like me logo Genes that share domains with TCEAL6: view

No data available for Gene Families for TCEAL6 Gene

Function for TCEAL6 Gene

Molecular function for TCEAL6 Gene

UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation

Animal Model Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for TCEAL6

In Situ Assay Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TCEAL6 Gene

Localization for TCEAL6 Gene

Subcellular locations from UniProtKB/Swiss-Prot for TCEAL6 Gene

Subcellular locations from

Jensen Localization Image for TCEAL6 Gene COMPARTMENTS Subcellular localization image for TCEAL6 gene
Compartment Confidence
nucleus 4
cytosol 2

Gene Ontology (GO) - Cellular Components for TCEAL6 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with TCEAL6: view

Pathways for TCEAL6 Gene

SuperPathways for TCEAL6 Gene

No Data Available

Interacting Proteins for TCEAL6 Gene

Selected Interacting proteins: Q6IPX3-TCAL6_HUMAN for TCEAL6 Gene via I2D

Symbol External ID(s) Details

Gene Ontology (GO) - Biological Process for TCEAL6 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with TCEAL6: view

No data available for Pathways by source for TCEAL6 Gene

Transcripts for TCEAL6 Gene

mRNA/cDNA for TCEAL6 Gene

(1) Additional mRNA sequences :
(16) Selected AceView cDNA sequences:
(1) REFSEQ mRNAs :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TCEAL6 Gene

Transcription elongation factor A (SII)-like 6:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for TCEAL6

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for TCEAL6 Gene

No ASD Table

Relevant External Links for TCEAL6 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for TCEAL6 Gene

mRNA expression in normal human tissues for TCEAL6 Gene

mRNA differential expression in normal tissues according to GTEx for TCEAL6 Gene

This gene is overexpressed in Brain - Frontal Cortex (BA9) (5.1), Brain - Cerebellar Hemisphere (4.9), Brain - Hypothalamus (4.8), Pituitary (4.6), Brain - Cortex (4.6), and Brain - Anterior cingulate cortex (BA24) (4.4).

Protein differential expression in normal tissues for TCEAL6 Gene

This gene is overexpressed in Adrenal (38.4) and Heart (9.4).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for TCEAL6 Gene

SOURCE GeneReport for Unigene cluster for TCEAL6 Gene Hs.447815

genes like me logo Genes that share expressions with TCEAL6: view

Expression partners for TCEAL6 Gene

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for TCEAL6 Gene

Orthologs for TCEAL6 Gene

This gene was present in the common ancestor of mammals.

Orthologs for TCEAL6 Gene

Organism Taxonomy Gene Similarity Type Details
(Mus musculus)
Mammalia Tceal6 35
  • 79.26 (n)
  • 69.44 (a)
Tceal3 36
  • 62 (a)
Tceal5 36
  • 60 (a)
Tceal6 36
  • 62 (a)
(Pan troglodytes)
Mammalia TCEAL3 35
  • 96.15 (n)
  • 95.6 (a)
  • 87 (a)
(Canis familiaris)
Mammalia -- 36
  • 68 (a)
-- 36
  • 72 (a)
-- 36
  • 69 (a)
-- 36
  • 73 (a)
Species with no ortholog for TCEAL6:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TCEAL6 Gene

Gene Tree for TCEAL6 (if available)
Gene Tree for TCEAL6 (if available)

Paralogs for TCEAL6 Gene

Paralogs for TCEAL6 Gene

Selected SIMAP similar genes for TCEAL6 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with TCEAL6: view

Variants for TCEAL6 Gene

Sequence variations from dbSNP and Humsavar for TCEAL6 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type MAF
rs2001045 -- 102,139,669(-) ATACT(G/T)CCATG downstream-variant-500B
rs2105853 -- 102,144,053(-) aaatc(A/G)taaac upstream-variant-2KB
rs3752340 -- 102,140,648(+) AAAGC(A/G)TTGGG utr-variant-3-prime
rs4898335 -- 102,144,326(+) ttaaa(C/G)tattt upstream-variant-2KB
rs5986847 -- 102,143,112(+) CGGTA(C/T)GTAAA upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for TCEAL6 Gene

Variant ID Type Subtype PubMed ID
nsv469670 CNV Complex 16826518

Relevant External Links for TCEAL6 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for TCEAL6 Gene

Disorders for TCEAL6 Gene

No disorders were found for TCEAL6 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for TCEAL6 Gene

Publications for TCEAL6 Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  2. The DNA sequence of the human X chromosome. (PMID: 15772651) Ross M.T. … Bentley D.R. (Nature 2005) 3 4
  3. Mammalian BEX, WEX and GASP genes: coding and non-coding chimaerism sustained by gene conversion events. (PMID: 16221301) Winter E.E. … Ponting C.P. (BMC Evol. Biol. 2005) 2 3
  4. A protein array screen for Kaposi's sarcoma-associated herpesvirus LANA interactors links LANA to TIP60, PP2A activity, and telomere shortening. (PMID: 22379092) Shamay M. … Hayward S.D. (J. Virol. 2012) 3
  5. A COFRADIC protocol to study protein ubiquitination. (PMID: 24816145) Stes E. … Gevaert K. (J. Proteome Res. 2014) 3

Products for TCEAL6 Gene

Sources for TCEAL6 Gene

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