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Aliases for TBL1XR1-AS1 Gene

Subcategory (RNA class) for TBL1XR1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TBL1XR1-AS1 Gene

  • TBL1XR1 Antisense RNA 1 2 3 5
  • TBL1XR1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for TBL1XR1-AS1 Gene

Previous GeneCards Identifiers for TBL1XR1-AS1 Gene

  • GC00U933952
  • GC03P176763

Summaries for TBL1XR1-AS1 Gene

GeneCards Summary for TBL1XR1-AS1 Gene

TBL1XR1-AS1 (TBL1XR1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TBL1XR1-AS1 Gene

Genomics for TBL1XR1-AS1 Gene

Regulatory Elements for TBL1XR1-AS1 Gene

Enhancers for TBL1XR1-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F177515 1.4 FANTOM5 Ensembl ENCODE 10.4 +479.2 479193 2.0 ELF3 MLX ARID4B DMAP1 THRB ZNF48 RAD21 RARA MIXL1 THAP11 TBL1XR1-AS1 RN7SKP52 ENSG00000200288 GC03M177625
GH03F177477 1.3 Ensembl ENCODE 9.8 +441.7 441656 4.1 ATF1 MLX CREB3L1 SIN3A DMAP1 FEZF1 ZNF2 YY1 GTF3C2 GLIS2 TBL1XR1-AS1 LINC01208 LINC00578 RN7SKP52
GH03F177829 1.3 FANTOM5 Ensembl ENCODE 9.8 +793.4 793373 1.6 PKNOX1 CEBPB INSM2 FEZF1 ZNF488 ZEB2 EP300 ATF2 OSR2 ZFHX2 TBL1XR1-AS1 LINC02015 ENSG00000225790
GH03F177522 1.2 Ensembl ENCODE 10.4 +488.0 488042 5.4 ELF3 ATF1 MLX ARID4B DMAP1 ZSCAN9 RAD21 RARA SCRT2 CREM TBL1XR1-AS1 RN7SKP52 ENSG00000200288 GC03M177625
GH03F177776 1.2 FANTOM5 Ensembl ENCODE 10.1 +740.5 740468 3.5 GATAD2A CTCF ZNF654 NFIA ZFP64 HLF REST RAD21 GATA3 JUND LINC02015 TBL1XR1-AS1 ENSG00000225790 LOC101928711
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TBL1XR1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TBL1XR1-AS1 Gene

Chromosome:
3
Start:
177,037,405 bp from pter
End:
177,047,923 bp from pter
Size:
10,519 bases
Orientation:
Plus strand

Genomic View for TBL1XR1-AS1 Gene

Genes around TBL1XR1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TBL1XR1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TBL1XR1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for TBL1XR1-AS1 Gene

Proteins for TBL1XR1-AS1 Gene

Post-translational modifications for TBL1XR1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TBL1XR1-AS1 Gene

Domains & Families for TBL1XR1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TBL1XR1-AS1 Gene

Function for TBL1XR1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TBL1XR1-AS1 Gene

Localization for TBL1XR1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TBL1XR1-AS1 Gene

Pathways & Interactions for TBL1XR1-AS1 Gene

SuperPathways for TBL1XR1-AS1 Gene

No Data Available

Interacting Proteins for TBL1XR1-AS1 Gene

Gene Ontology (GO) - Biological Process for TBL1XR1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TBL1XR1-AS1 Gene

Transcripts for TBL1XR1-AS1 Gene

mRNA/cDNA for TBL1XR1-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TBL1XR1-AS1 Gene

No ASD Table

Relevant External Links for TBL1XR1-AS1 Gene

GeneLoc Exon Structure for
TBL1XR1-AS1
ECgene alternative splicing isoforms for
TBL1XR1-AS1

Expression for TBL1XR1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TBL1XR1-AS1 Gene

genes like me logo Genes that share expression patterns with TBL1XR1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TBL1XR1-AS1 Gene

Orthologs for TBL1XR1-AS1 Gene

Evolution for TBL1XR1-AS1 Gene

ENSEMBL:
Gene Tree for TBL1XR1-AS1 (if available)
TreeFam:
Gene Tree for TBL1XR1-AS1 (if available)

No data available for Orthologs for TBL1XR1-AS1 Gene

Paralogs for TBL1XR1-AS1 Gene

No data available for Paralogs for TBL1XR1-AS1 Gene

Variants for TBL1XR1-AS1 Gene

Relevant External Links for TBL1XR1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TBL1XR1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TBL1XR1-AS1 Gene

Disorders for TBL1XR1-AS1 Gene

No disorders were found for TBL1XR1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TBL1XR1-AS1 Gene

Publications for TBL1XR1-AS1 Gene

No publications were found for TBL1XR1-AS1 Gene.

Products for TBL1XR1-AS1 Gene

Sources for TBL1XR1-AS1 Gene

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