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Aliases for TBC1D3P2 Gene

Aliases for TBC1D3P2 Gene

  • TBC1 Domain Family, Member 3 Pseudogene 2 2 3

External Ids for TBC1D3P2 Gene

Previous GeneCards Identifiers for TBC1D3P2 Gene

  • GC17M057699
  • GC17M057651
  • GC17U901289
  • GC17M060344

Summaries for TBC1D3P2 Gene

GeneCards Summary for TBC1D3P2 Gene

TBC1D3P2 (TBC1 Domain Family, Member 3 Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TBC1D3P2 Gene

Genomics for TBC1D3P2 Gene

Genomic Location for TBC1D3P2 Gene

Chromosome:
17
Start:
62,264,705 bp from pter
End:
62,275,655 bp from pter
Size:
10,951 bases
Orientation:
Minus strand

Genomic View for TBC1D3P2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TBC1D3P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TBC1D3P2 Gene

No data available for Regulatory Elements for TBC1D3P2 Gene

Proteins for TBC1D3P2 Gene

Post-translational modifications for TBC1D3P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TBC1D3P2 Gene

Domains & Families for TBC1D3P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TBC1D3P2 Gene

Function for TBC1D3P2 Gene

Phenotypes for TBC1D3P2 Gene

GenomeRNAi human phenotypes for TBC1D3P2:
genes like me logo Genes that share phenotypes with TBC1D3P2: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TBC1D3P2 Gene

Localization for TBC1D3P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TBC1D3P2 Gene

Pathways & Interactions for TBC1D3P2 Gene

SuperPathways for TBC1D3P2 Gene

No Data Available

Interacting Proteins for TBC1D3P2 Gene

Gene Ontology (GO) - Biological Process for TBC1D3P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TBC1D3P2 Gene

Drugs & Compounds for TBC1D3P2 Gene

No Compound Related Data Available

Transcripts for TBC1D3P2 Gene

mRNA/cDNA for TBC1D3P2 Gene

(3) Additional mRNA sequences :
(1) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TBC1D3P2 Gene

TBC1 domain family, member 3 pseudogene 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TBC1D3P2 Gene

No ASD Table

Relevant External Links for TBC1D3P2 Gene

GeneLoc Exon Structure for
TBC1D3P2
ECgene alternative splicing isoforms for
TBC1D3P2

Expression for TBC1D3P2 Gene

mRNA expression in normal human tissues for TBC1D3P2 Gene

mRNA differential expression in normal tissues according to GTEx for TBC1D3P2 Gene

This gene is overexpressed in Testis (x47.2).

SOURCE GeneReport for Unigene cluster for TBC1D3P2 Gene Hs.448884

genes like me logo Genes that share expression patterns with TBC1D3P2: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for TBC1D3P2 Gene

Orthologs for TBC1D3P2 Gene

Evolution for TBC1D3P2 Gene

ENSEMBL:
Gene Tree for TBC1D3P2 (if available)
TreeFam:
Gene Tree for TBC1D3P2 (if available)

No data available for Orthologs for TBC1D3P2 Gene

Paralogs for TBC1D3P2 Gene

No data available for Paralogs for TBC1D3P2 Gene

Variants for TBC1D3P2 Gene

Sequence variations from dbSNP and Humsavar for TBC1D3P2 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type MAF
rs2019815 -- 62,269,798(+) TCAGG(A/G)CCTGA intron-variant
rs3901389 -- 62,270,177(-) gaagc(C/T)agacc intron-variant
rs4080914 -- 62,268,147(+) CACCT(A/G/T)ATGCC nc-transcript-variant
rs4107881 -- 62,264,588(+) ACACC(C/T)GGCCT downstream-variant-500B
rs4968419 -- 62,267,164(+) TTATC(A/G)GCATG nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for TBC1D3P2 Gene

Variant ID Type Subtype PubMed ID
nsv833507 CNV Loss 17160897
nsv469887 CNV Complex 16826518
nsv833508 CNV Gain+Loss 17160897
dgv997e1 CNV Complex 17122850
nsv428350 CNV Gain 18775914
esv27452 CNV Gain+Loss 19812545
nsv9583 CNV Gain+Loss 18304495
dgv3243n71 CNV Gain 21882294
nsv908677 CNV Gain 21882294

Relevant External Links for TBC1D3P2 Gene

HapMap Linkage Disequilibrium report
TBC1D3P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for TBC1D3P2 Gene

Disorders for TBC1D3P2 Gene

Relevant External Links for TBC1D3P2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TBC1D3P2
genes like me logo Genes that share disorders with TBC1D3P2: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TBC1D3P2 Gene

Publications for TBC1D3P2 Gene

  1. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) OlA!h J. … OvA!di J. (J. Biol. Chem. 2011) 67
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 67

Products for TBC1D3P2 Gene

Sources for TBC1D3P2 Gene

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