Free for academic non-profit institutions. Other users need a Commercial license

Aliases for TBC1D3P1-DHX40P1 Gene

Aliases for TBC1D3P1-DHX40P1 Gene

  • TBC1D3P1-DHX40P1 Readthrough Transcribed Pseudogene 2 3
  • TBC1D3P1-DHX40P1 Readthrough (Non-Protein Coding) 2 3
  • TBC1 Domain Family, Member 3 Pseudogene 1 3
  • TBC1D3-DHX40 Pseudogene 3
  • TBC1D3P1 3
  • DHX40P1 3
  • DHX40P 3

External Ids for TBC1D3P1-DHX40P1 Gene

Previous GeneCards Identifiers for TBC1D3P1-DHX40P1 Gene

  • GC17M058054
  • GC17M058039

Summaries for TBC1D3P1-DHX40P1 Gene

GeneCards Summary for TBC1D3P1-DHX40P1 Gene

TBC1D3P1-DHX40P1 (TBC1D3P1-DHX40P1 Readthrough Transcribed Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TBC1D3P1-DHX40P1 Gene

Genomics for TBC1D3P1-DHX40P1 Gene

Genomic Location for TBC1D3P1-DHX40P1 Gene

Start:
59,962,363 bp from pter
End:
60,018,975 bp from pter
Size:
56,613 bases
Orientation:
Minus strand

Genomic View for TBC1D3P1-DHX40P1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TBC1D3P1-DHX40P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TBC1D3P1-DHX40P1 Gene

No data available for Regulatory Elements for TBC1D3P1-DHX40P1 Gene

Proteins for TBC1D3P1-DHX40P1 Gene

Post-translational modifications for TBC1D3P1-DHX40P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TBC1D3P1-DHX40P1 Gene

Domains for TBC1D3P1-DHX40P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TBC1D3P1-DHX40P1 Gene

Function for TBC1D3P1-DHX40P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TBC1D3P1-DHX40P1 Gene

Localization for TBC1D3P1-DHX40P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TBC1D3P1-DHX40P1 Gene

Pathways for TBC1D3P1-DHX40P1 Gene

SuperPathways for TBC1D3P1-DHX40P1 Gene

No Data Available

Interacting Proteins for TBC1D3P1-DHX40P1 Gene

Gene Ontology (GO) - Biological Process for TBC1D3P1-DHX40P1 Gene

None

No data available for Pathways by source for TBC1D3P1-DHX40P1 Gene

Transcripts for TBC1D3P1-DHX40P1 Gene

mRNA/cDNA for TBC1D3P1-DHX40P1 Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TBC1D3P1-DHX40P1 Gene

TBC1D3P1-DHX40P1 readthrough transcribed pseudogene:
Representative Sequences:

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate TBC1D3P1-DHX40P1
    • Block miRNA regulation of TBC1D3P1-DHX40P1 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for TBC1D3P1-DHX40P1

    Primer Products

    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for TBC1D3P1-DHX40P1 Gene

    No ASD Table

    Relevant External Links for TBC1D3P1-DHX40P1 Gene

    GeneLoc Exon Structure for
    TBC1D3P1-DHX40P1
    ECgene alternative splicing isoforms for
    TBC1D3P1-DHX40P1

    Expression for TBC1D3P1-DHX40P1 Gene

    mRNA expression in normal human tissues for TBC1D3P1-DHX40P1 Gene

    mRNA differential expression in normal tissues according to GTEx for TBC1D3P1-DHX40P1 Gene

    This gene is overexpressed in Testis (50.3).

    SOURCE GeneReport for Unigene cluster for TBC1D3P1-DHX40P1 Gene Hs.600085

    genes like me logo Genes that share expressions with TBC1D3P1-DHX40P1: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for TBC1D3P1-DHX40P1 Gene

    Orthologs for TBC1D3P1-DHX40P1 Gene

    Evolution for TBC1D3P1-DHX40P1 Gene

    ENSEMBL:
    Gene Tree for TBC1D3P1-DHX40P1 (if available)
    TreeFam:
    Gene Tree for TBC1D3P1-DHX40P1 (if available)

    No data available for Orthologs for TBC1D3P1-DHX40P1 Gene

    Paralogs for TBC1D3P1-DHX40P1 Gene

    No data available for Paralogs for TBC1D3P1-DHX40P1 Gene

    Variants for TBC1D3P1-DHX40P1 Gene

    Sequence variations from dbSNP and Humsavar for TBC1D3P1-DHX40P1 Gene

    SNP ID Clin Chr 17 pos Sequence Context AA Info Type MAF
    rs364924 -- 60,019,993(-) TAACC(A/G)TCCAA upstream-variant-2KB
    rs390846 -- 60,019,478(-) TTAGC(A/T)TTTGT upstream-variant-2KB
    rs2191079 -- 60,010,824(-) GTGCC(C/T)CCCAT intron-variant
    rs2333678 -- 60,003,569(+) TTATT(A/G)CTGCT intron-variant
    rs2333680 -- 60,003,675(+) gccca(C/T)acctg intron-variant

    Structural Variations from Database of Genomic Variants (DGV) for TBC1D3P1-DHX40P1 Gene

    Variant ID Type Subtype PubMed ID
    nsv471702 CNV Gain 15918152
    nsv833502 CNV Gain 17160897
    dgv996e1 CNV Complex 17122850
    nsv428348 CNV Gain 18775914
    esv2676797 CNV Deletion 23128226
    nsv7295 OTHER Inversion 18451855
    nsv9578 CNV Gain+Loss 18304495
    esv28791 CNV Gain+Loss 19812545

    Relevant External Links for TBC1D3P1-DHX40P1 Gene

    HapMap Linkage Disequilibrium report
    TBC1D3P1-DHX40P1

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for TBC1D3P1-DHX40P1 Gene

    Disorders for TBC1D3P1-DHX40P1 Gene

    No disorders were found for TBC1D3P1-DHX40P1 Gene.

    No data available for UniProtKB/Swiss-Prot for TBC1D3P1-DHX40P1 Gene

    Publications for TBC1D3P1-DHX40P1 Gene

    1. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

    Products for TBC1D3P1-DHX40P1 Gene

    • QIAGEN qRT-PCR Assays for microRNAs that regulate TBC1D3P1-DHX40P1
      • QuantiTect SYBR Green Assays in human,mouse,rat
      • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
      • QuantiFast Probe-based Assays in human,mouse,rat
      • Predesigned siRNA for gene silencing in human,mouse,rat for TBC1D3P1-DHX40P1
      • Block miRNA regulation of TBC1D3P1-DHX40P1 using miScript Target Protectors

      Sources for TBC1D3P1-DHX40P1 Gene

      Back to Top

      Content