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Aliases for TBC1D27 Gene

Aliases for TBC1D27 Gene

  • TBC1 Domain Family, Member 27 2 3

External Ids for TBC1D27 Gene

Previous GeneCards Identifiers for TBC1D27 Gene

  • GC17M016767
  • GC17M016701
  • GC17M016761
  • GC17M016514
  • GC17M016828

Summaries for TBC1D27 Gene

GeneCards Summary for TBC1D27 Gene

TBC1D27 (TBC1 Domain Family, Member 27) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TBC1D27 Gene

Genomics for TBC1D27 Gene

Regulatory Elements for TBC1D27 Gene

Genomic Location for TBC1D27 Gene

Chromosome:
17
Start:
16,922,915 bp from pter
End:
16,934,839 bp from pter
Size:
11,925 bases
Orientation:
Minus strand

Genomic View for TBC1D27 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for TBC1D27 Gene

Proteins for TBC1D27 Gene

Post-translational modifications for TBC1D27 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TBC1D27 Gene

Domains & Families for TBC1D27 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TBC1D27 Gene

Function for TBC1D27 Gene

Phenotypes for TBC1D27 Gene

GenomeRNAi human phenotypes for TBC1D27:
genes like me logo Genes that share phenotypes with TBC1D27: view

miRNA for TBC1D27 Gene

miRTarBase miRNAs that target TBC1D27

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , Transcription Factor Targets and HOMER Transcription for TBC1D27 Gene

Localization for TBC1D27 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TBC1D27 Gene

Pathways & Interactions for TBC1D27 Gene

SuperPathways for TBC1D27 Gene

No Data Available

Interacting Proteins for TBC1D27 Gene

Gene Ontology (GO) - Biological Process for TBC1D27 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TBC1D27 Gene

Drugs & Compounds for TBC1D27 Gene

No Compound Related Data Available

Transcripts for TBC1D27 Gene

mRNA/cDNA for TBC1D27 Gene

(11) REFSEQ mRNAs :
(3) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TBC1D27 Gene

No ASD Table

Relevant External Links for TBC1D27 Gene

GeneLoc Exon Structure for
TBC1D27
ECgene alternative splicing isoforms for
TBC1D27

Expression for TBC1D27 Gene

mRNA expression in normal human tissues for TBC1D27 Gene

mRNA differential expression in normal tissues according to GTEx for TBC1D27 Gene

This gene is overexpressed in Spleen (x13.5) and Small Intestine - Terminal Ileum (x11.3).
genes like me logo Genes that share expression patterns with TBC1D27: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for TBC1D27 Gene

Orthologs for TBC1D27 Gene

Evolution for TBC1D27 Gene

ENSEMBL:
Gene Tree for TBC1D27 (if available)
TreeFam:
Gene Tree for TBC1D27 (if available)

No data available for Orthologs for TBC1D27 Gene

Paralogs for TBC1D27 Gene

No data available for Paralogs for TBC1D27 Gene

Variants for TBC1D27 Gene

Sequence variations from dbSNP and Humsavar for TBC1D27 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type MAF
rs883331 -- 16,927,994(+) GCGAG(C/T)GTCTA upstream-variant-2KB, utr-variant-5-prime, intron-variant, nc-transcript-variant
rs3751994 -- 16,927,404(-) GCAGG(C/T)GCCAC upstream-variant-2KB, intron-variant, nc-transcript-variant
rs3751995 -- 16,927,096(-) GCCGC(A/G)TGATG upstream-variant-2KB, intron-variant, nc-transcript-variant
rs3751996 -- 16,926,973(-) TCGGC(A/G)GCTTC upstream-variant-2KB, intron-variant, nc-transcript-variant, splice-acceptor-variant
rs3751997 -- 16,926,701(-) CCTGG(G/T)GGAGG upstream-variant-2KB, intron-variant

Relevant External Links for TBC1D27 Gene

HapMap Linkage Disequilibrium report
TBC1D27

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TBC1D27 Gene

Disorders for TBC1D27 Gene

Relevant External Links for TBC1D27

Genetic Association Database (GAD)
TBC1D27
Human Genome Epidemiology (HuGE) Navigator
TBC1D27
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TBC1D27
genes like me logo Genes that share disorders with TBC1D27: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TBC1D27 Gene

Publications for TBC1D27 Gene

  1. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 67
  2. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 67
  3. Association between genetic variants in VEGF, ERCC3 and occupational benzene haematotoxicity. (PMID: 19773279) Hosgood H.D. … Lan Q. (Occup Environ Med 2009) 67
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 67
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 67

Products for TBC1D27 Gene

Sources for TBC1D27 Gene

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