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Aliases & Descriptions for TANK
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases I-TRAF 1 , 2 , 3 ITRAF 3 TRAF2 2 , 3
Descriptions TRAF family member-associated NF-KAPPA-B activator 2 TRAF family member-associated NFKB activator 2 TRAF interacting protein TANK 2 TRAF-interacting protein 3
Search outside databases for aliases for TANK genePrevious GC identifers: GC02P160047 GC02P160521 GC02P161957 GC02P162196 GC02P161818
Summaries for TANK (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for TANK : The TRAF (tumor necrosis factor receptor-associated factor) family of proteins associate with andtransduce signals from members of the tumor necrosis factor receptor superfamily. The proteinencoded by this gene is found in the cytoplasm and can bind to TRAF1, TRAF2, or TRAF3, therebyinhibiting TRAF function by sequestering the TRAFs in a latent state in the cytoplasm. Forexample, the protein encoded by this gene can block TRAF2 binding to LMP1, the Epstein-Barr virustransforming protein, and inhibit LMP1-mediated NF-kappa-B activation. Two transcript variantsencoding different isoforms have been found for this gene. [provided by RefSeq] UniProtKB/Swiss-Prot: TANK_HUMAN, Q92844 Function : Acts as a regulator of TRAF function by maintaining them in a latent state.Overexpression inhibits TRAF2-mediated NF-kappa-B activation signaled by CD40, TNFR1 and TNFR2.Blocks TRAF2 binding to LMP1 and inhibits LMP1-mediated NF-kappa-B activation. May be involved inI-kappa-B-kinase (IKK) regulation; may function as an adapter for kinases such as TBK1 or IKBKEthat can modulate IKK activity
Gene Wiki entry for TANK
Genomic Location for TANK
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
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Transcription factor binding sites according to
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the TANK gene Entrez Gene cytogenetic band: 2q24-q31 Ensembl cytogenetic band: 2q24.2 HGNC cytogenetic band: 2q24-q31 TANK Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 2 GeneLoc Exon Structure
GeneLoc location for GC02P161701:
(about GC identifiers )
Start:
161,701,712 bp from pter
End:
161,800,978 bp from pter
Size:
99,267 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000002.10 NT_005403.16 Proteins for TANK
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: TANK_HUMAN, Q92844 (See
protein sequence )Recommended Name: TRAF family member-associated NF-kappa-B activator Size : 425 amino acids; 47816 Da
Subunit : Interacts with TBK1 (via TRAF-C domain). Interacts with TRAF1 (via TRAF-C domain).Interacts with TRAF2 (via TRAF-C domain); the interaction is disrupted by the phosphorylation ofTANK by IKBKE. Interacts with TRAF3 (via TRAF-C domain); the interaction with TRAF3 is weaker thanthe interactions with TRAF1 and TRAF3. Interacts with IKBKG; the interaction is enhanced by IKBKEand TBK1. Part of a ternary complex consisting of TANK, IKBKB and IKBKG
Subcellular location : Cytoplasm
PDB structure from and Proteopedia : 1KZZ (3D)
 1L0A (3D)
 
Secondary accessions : Q92885Alternative splicing : 2 isoforms : Q92844-1 Q92844-2
Post-translational modifications:
Phosphorylated by IKBKE1
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (2 alternative transcripts):
NP_004171.2 NP_597841.1 ENSEMBL proteins: ENSP00000384492 ENSP00000384235 ENSP00000259075 ENSP00000376505 ENSP00000385487 ENSP00000385983 Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: TANK 1 Gene Ontology (GO) cellular component term (links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0005737 cytoplasm
IEA --
About this table Antibodies for TANK: Assays for TANK:
Protein
Domains/ Families for TANK(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry Q92844 ProtoNet protein and cluster: Q92844
UniProtKB/Swiss-Prot: TANK_HUMAN, Q92844 Similarity : Contains 1 C2H2-type zinc finger
Gene Function for TANK
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
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Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
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siRNAs from
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SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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Inhib. RNA: Invitrogen RNAi Products for gene knock-down (TANK ) Millipore RNAi Products for the Analysis of TANK Gene knock-down Abnova Chimera RNAi Products for Gene knock-down (TANK )
               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_004180 Applied Biosystems Silencer ® siRNAs for TANK Sigma-Aldrich siRNA and siRNA Panels for TANK Sigma-Aldrich shRNA for TANK Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_004180                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_004180                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_004180  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_004180 UniProtKB/Swiss-Prot: TANK_HUMAN, Q92844 Function : Acts as a regulator of TRAF function by maintaining them in a latent state.Overexpression inhibits TRAF2-mediated NF-kappa-B activation signaled by CD40, TNFR1 and TNFR2.Blocks TRAF2 binding to LMP1 and inhibits LMP1-mediated NF-kappa-B activation. May be involved inI-kappa-B-kinase (IKK) regulation; may function as an adapter for kinases such as TBK1 or IKBKEthat can modulate IKK activity
Genatlas biochemistry entry for TANK :tumor necrosis receptor-associated factor ,TRAF-interacting protein,mediator of NFKB activationafter induction by TRAF2 3 Gene Ontology (GO) molecular function terms (links to tree view) :
About this table
Pathways & Interactions for TANK
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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4 Sigma-Aldrich "Your Favorite Gene" Pathways for TANK (Your Favorite Gene powered by Ingenuity) Gene Network CentralTM Interacting Genes and Proteins Network for TANK 5/62 Interacting proteins for TANK (ENSP00000259075 3 Q92844 1 , 2 ) via UniProtKB, MINT, and/or STRING (see all 62
)About this table 1 Gene Ontology (GO) biological process term (links to tree view) :
About this table
Drugs & Compounds for TANK (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for TANK 1 Novoseek chemical compound relationship for TANK gene
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Transcripts for TANK(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
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Inhib. RNA: Invitrogen RNAi Products for gene knock-down (TANK ) Millipore RNAi Products for the Analysis of TANK Gene knock-down Abnova Chimera RNAi Products for Gene knock-down (TANK )
               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_004180 Sigma-Aldrich siRNA and siRNA Panels for TANK Sigma-Aldrich shRNA for TANK Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_004180 NM_133484
REFSEQ mRNAs for TANK gene (2 alternative transcripts): NM_004180.2 NM_133484.1
Applied Biosystems TaqMan ® Gene Expression Assays: NM_004180 NM_133484
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_004180                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_004180                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_004180  
Additional cDNA sequence: AK313096.1 BC003388.1 BC067779.1 BT009855.1 CR602454.1 CR612977.1 U59863.1 U63830.1
21 DOTS entries : DT.91675628 DT.217271 DT.95275688 DT.91738433 DT.121025985 DT.86836152 DT.205093 DT.40113470 DT.100025328 DT.100782241 DT.92021857 DT.97763505 DT.100659606 DT.100782242 DT.101981250 DT.121025965 DT.40132141 DT.92024293 DT.96085145 DT.121025952 DT.95295476
24/203 AceView cDNA sequences (see all 203
):BM680474 T30861 BX436856 CR612977 AW966902 CB054258 BU736055 F04517 H84182 AA484829 AW615381 AU139286 AA134813 NM_133484 AI139083 AW967525 AI440070 CR602454 BG680246 AI090614 AU279460 AA765575 BX091561 AW950654
highest scoring ESTs for TANK :U59863 AA031454 AA134814 AA580060 AA765575 AA837280 AI090614 AI499100 AI581820 AI769398
Unigene Cluster for TANK: TRAF family member-associated NFKB activator Hs.132257 [show with all ESTs ] Unigene Representative Sequence: NM_004180 GeneLoc Exon Structure 5/11 Alternative Splicing Database (ASD) splice patterns (SP) for TANK (see all 11
) ExUns: 1a · 1b ^ 2a · 2b · 2c ^ 3 ^ 4a · 4b ^ 5 ^ 6 ^ 7a · 7b · 7c · 7d ^ 8 ^ 9a · 9b · 9c ^ 10 ^ 11 ^ 12a · 12b ^ 13a · 13b · 13c ^ 14 ^ SP1 :           -   -   -   -   -   -       -         -   -               -   SP2 :     -   -   -   -   -   -   -   -   -       -         -   -               -   SP3 :           -   -   -   -   -   -   -     -         -   -                 SP4 :                           -         -   -                 SP5 :           -   -   -   -   -   -       -                          
ExUns: 15a · 15b SP1 :     SP2 :     SP3 :     SP4 :     SP5 :    
About this scheme ECgene alternative splicing isoforms for TANK 6 Ensembl transcripts including schematic representations : ENST00000406287
ENST00000402568
ENST00000259075
ENST00000392749
ENST00000405852
ENST00000403609
Expression for TANK
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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TANK expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for TANK 1 / 2 / 3
7 probe-sets matching TANK gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: ATGAAATTAASOURCE GeneReport for Unigene cluster: Hs.132257 Expression variation in blood from EXPOLDB for TANK
UniProtKB/Swiss-Prot: TANK_HUMAN, Q92844 Tissue specificity : Ubiquitous
Orthologs for TANK
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for TANK gene from 5/7 species (see all 7
)
About this table Species with no ortholog for TANK ENSEMBL Gene Tree for TANK Paralogs for TANK (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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SNPs/Variants for TANK (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for TANK (up to first 250kb)
Disorders & Mutations for TANK
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 603893 4 Novoseek disease relationships for TANK gene
About this table Human Genome Epidemiology Navigator: TANK (4 documents)
Medical News for TANK (Possibly Related Articles in
Doctor's Guide )
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Publications for TANK (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/77 PubMed articles for TANK gene (see all 77
): I-TRAF is a novel TRAF-interacting protein that regulates TRAF- mediated signal transduction. (PubMed id 8710854) 1, 2, 3, 4 Rothe M....Goeddel D.V. (1996) Tumor necrosis factor receptor associated factor 2 is a mediator of NF-kappa B activation by latent infection membrane protein 1, the Epstein-Barr virus transforming protein. (PubMed id 8855313) 2, 3, 4 Kaye K.M....Mosialos G. (1996) NF-kB activation by a signaling complex containing TRAF2, TANK, and TBK1, a novel IKK-related kinase. (PubMed id 10581243) 1, 3, 4 Pomerantz J.L. and Baltimore D. (1999) Downstream regulator TANK binds to the CD40 recognition site on TRAF3. (PubMed id 12005438) 1, 3, 4 Li C.... Ely K.R. (2002) Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PubMed id 17081983) 3, 4 Olsen J.V....Mann M. (2006) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 3, 4 Gerhard D.S....Malek J. (2004) Association of the adaptor TANK with the I kappa B kinase (IKK) regulator NEMO connects IKK complexes with IKK epsilon and TBK1 kinases. (PubMed id 12133833) 3, 4 Chariot A.... Siebenlist U. (2002) NF-kappaB activation through IKK-i-dependent I-TRAF/TANK phosphorylation. (PubMed id 10759890) 3, 4 Nomura F....Akira S. (2000) TANK potentiates tumor necrosis factor receptor-associated factor-mediated c-Jun N-terminal kinase/stress-activated protein kinase activation through the germinal center kinase pathway. (PubMed id 10490605) 1, 3 Chin A.I....Cheng G. (1999) Lipopolysaccharide-mediated interferon regulatory factor activation involves TBK1-IKKepsilon-dependent Lys(63)-linked polyubiquitination and phosphorylation of TANK/I-TRAF. (PubMed id 17823124) 1, 3 Gatot J.S....Chariot A. (2007)
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Genome Databases showing TANK
(According to
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euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
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Other Databases showing TANK
(According to HUGE )
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Specialized Databases showing TANK (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for TANK (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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