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Aliases for TANGO6 Gene

Aliases for TANGO6 Gene

  • Transport And Golgi Organization 6 Homolog (Drosophila) 2 3
  • Transmembrane And Coiled-Coil Domain-Containing Protein 7 3 4
  • Transmembrane And Coiled-Coil Domains 7 2 3
  • TMCO7 3 4
  • Transport And Golgi Organization Protein 6 Homolog 3
  • KIAA1746 4

External Ids for TANGO6 Gene

Previous HGNC Symbols for TANGO6 Gene

  • TMCO7

Previous GeneCards Identifiers for TANGO6 Gene

  • GC16P068878

Summaries for TANGO6 Gene

GeneCards Summary for TANGO6 Gene

TANGO6 (Transport And Golgi Organization 6 Homolog (Drosophila)) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TANGO6 Gene

Genomics for TANGO6 Gene

Genomic Location for TANGO6 Gene

Start:
68,843,553 bp from pter
End:
69,085,182 bp from pter
Size:
241,630 bases
Orientation:
Plus strand

Genomic View for TANGO6 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TANGO6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TANGO6 Gene

No data available for Regulatory Elements for TANGO6 Gene

Proteins for TANGO6 Gene

  • Protein details for TANGO6 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9C0B7-TNG6_HUMAN
    Recommended name:
    Transport and Golgi organization protein 6 homolog
    Protein Accession:
    Q9C0B7
    Secondary Accessions:
    • Q569F9
    • Q9H9K1

    Protein attributes for TANGO6 Gene

    Size:
    1094 amino acids
    Molecular mass:
    120748 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAB14224.1; Type=Erroneous initiation; Note=Translation N-terminally shortened.; Evidence={ECO:0000305}; Sequence=BAB21837.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305};

neXtProt entry for TANGO6 Gene

Proteomics data for TANGO6 Gene at MOPED

Post-translational modifications for TANGO6 Gene

  • Ubiquitination at Lys387
  • Modification sites at PhosphoSitePlus

Other Protein References for TANGO6 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for TANGO6 Gene

Domains for TANGO6 Gene

Protein Domains for TANGO6 Gene

Graphical View of Domain Structure for InterPro Entry

Q9C0B7

UniProtKB/Swiss-Prot:

TNG6_HUMAN :
  • Q9C0B7
Family:
  • Belongs to the Tango6 family.
Similarity:
  • Contains 2 HEAT repeats.
genes like me logo Genes that share domains with TANGO6: view

No data available for Gene Families and Suggested Antigen Peptide Sequences for TANGO6 Gene

Function for TANGO6 Gene

Gene Ontology (GO) - Molecular Function for TANGO6 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005488 binding --
genes like me logo Genes that share ontologies with TANGO6: view

miRNA for TANGO6 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for TANGO6 Gene

Localization for TANGO6 Gene

Subcellular locations from UniProtKB/Swiss-Prot for TANGO6 Gene

Membrane; Single-pass membrane protein.

Gene Ontology (GO) - Cellular Components for TANGO6 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with TANGO6: view

No data available for Subcellular locations from COMPARTMENTS for TANGO6 Gene

Pathways for TANGO6 Gene

SuperPathways for TANGO6 Gene

No Data Available

Gene Ontology (GO) - Biological Process for TANGO6 Gene

None

No data available for Pathways by source for TANGO6 Gene

Transcripts for TANGO6 Gene

mRNA/cDNA for TANGO6 Gene

(6) Additional mRNA sequences :
(2) REFSEQ mRNAs :
(10) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TANGO6 Gene

Transport and golgi organization 6 homolog (Drosophila):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TANGO6 Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5a · 5b ^ 6 ^ 7 ^ 8 ^ 9a · 9b ^ 10 ^ 11a · 11b ^ 12a · 12b · 12c ^ 13 ^ 14a · 14b ^ 15 ^ 16a · 16b ^ 17a · 17b ^
SP1: - - - - -
SP2:
SP3: -
SP4:
SP5:
SP6:
SP7:

ExUns: 18 ^ 19a · 19b · 19c
SP1:
SP2:
SP3:
SP4:
SP5:
SP6:
SP7:

Relevant External Links for TANGO6 Gene

GeneLoc Exon Structure for
TANGO6
ECgene alternative splicing isoforms for
TANGO6

Expression for TANGO6 Gene

mRNA expression in normal human tissues for TANGO6 Gene

Integrated Proteomics: protein expression from ProteomicsDB, MOPED, and MaxQB for TANGO6 Gene

SOURCE GeneReport for Unigene cluster for TANGO6 Gene Hs.13526

genes like me logo Genes that share expressions with TANGO6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for TANGO6 Gene

Orthologs for TANGO6 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for TANGO6 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia TANGO6 36
  • 99 (a)
OneToOne
TMCO7 35
  • 99.42 (n)
  • 99.27 (a)
cow
(Bos Taurus)
Mammalia TANGO6 35
  • 86.7 (n)
  • 87.48 (a)
TANGO6 36
  • 85 (a)
OneToOne
dog
(Canis familiaris)
Mammalia TANGO6 35
  • 86.93 (n)
  • 86.41 (a)
TANGO6 36
  • 86 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Tango6 35
  • 83.6 (n)
  • 83.44 (a)
Tango6 16
Tango6 36
  • 82 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia TANGO6 36
  • 67 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia TANGO6 36
  • 67 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Tango6 35
  • 83.95 (n)
  • 83.36 (a)
chicken
(Gallus gallus)
Aves -- 36
  • 73 (a)
OneToMany
-- 36
  • 60 (a)
OneToMany
TANGO6 35
  • 67.01 (n)
  • 63.92 (a)
lizard
(Anolis carolinensis)
Reptilia TANGO6 36
  • 57 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia tango6 35
  • 59.67 (n)
  • 57.24 (a)
zebrafish
(Danio rerio)
Actinopterygii tango6 35
  • 54.9 (n)
  • 50.59 (a)
tango6 36
  • 47 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta Tango6 36
  • 19 (a)
OneToOne
worm
(Caenorhabditis elegans)
Secernentea ekl-6 36
  • 16 (a)
OneToOne
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes -- 36
  • 17 (a)
OneToOne
-- 38
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 36 (a)
OneToOne
Species with no ortholog for TANGO6:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for TANGO6 Gene

ENSEMBL:
Gene Tree for TANGO6 (if available)
TreeFam:
Gene Tree for TANGO6 (if available)

Paralogs for TANGO6 Gene

No data available for Paralogs for TANGO6 Gene

Variants for TANGO6 Gene

Sequence variations from dbSNP and Humsavar for TANGO6 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type MAF
rs28142 -- 68,990,487(+) gctcc(A/G)tccca intron-variant
rs28143 -- 68,996,741(+) TTGAC(C/G)ATTTT intron-variant
rs32853 -- 69,033,635(+) CTTCC(C/T)TTCTG intron-variant
rs32854 -- 69,034,437(-) GGGAG(G/T)CTTGG intron-variant
rs32858 -- 68,987,498(+) cgagt(A/G)gctgg intron-variant

Relevant External Links for TANGO6 Gene

HapMap Linkage Disequilibrium report
TANGO6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for TANGO6 Gene

Disorders for TANGO6 Gene

No disorders were found for TANGO6 Gene.

No data available for UniProtKB/Swiss-Prot for TANGO6 Gene

Publications for TANGO6 Gene

  1. Prediction of the coding sequences of unidentified human genes. XIX. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. (PMID: 11214970) Nagase T. … Ohara O. (DNA Res. 2000) 2 3 4
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. Systematic and quantitative assessment of the ubiquitin-modified proteome. (PMID: 21906983) Kim W. … Gygi S.P. (Mol. Cell 2011) 3
  4. Global identification of modular cullin-RING ligase substrates. (PMID: 21963094) Emanuele M.J. … Elledge S.J. (Cell 2011) 3
  5. Proteome-wide identification of ubiquitylation sites by conjugation of engineered lysine-less ubiquitin. (PMID: 22053931) Oshikawa K. … Nakayama K.I. (J. Proteome Res. 2012) 3

Products for TANGO6 Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate TANGO6
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for TANGO6
    • Block miRNA regulation of TANGO6 using miScript Target Protectors

    Sources for TANGO6 Gene

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