TAL2 Gene
protein-coding GIFtS : 50
GCID: GC09 P108424
T-cell acute lymphocytic leukemia 2
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Aliasesfor TAL2 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases T-Cell Acute Lymphocytic Leukemia 2 1 2 BHLHa191 Class A Basic Helix-Loop-Helix Protein 192 3 TAL-22 3 T-Cell Acute Lymphocytic Leukemia Protein 22 BHLHA193
Export aliases for TAL2 gene to outside databases Previous GC identifers: GC09P099225 GC09P100168 GC09P101882 GC09P103804 GC09P105504 GC09P107464 GC09P078026
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Summariesfor TAL2 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for TAL2 : This intronless gene encodes a helix-loop-helix protein. Translocations between this gene on chromosome 9 and the T-cell receptor beta-chain locus on chromosome 7 have been associated with activation of the T-cell acute lymphocytic leukemia 2 gene and T-cell acute lymphoblastic leukemia. (provided by RefSeq, Mar 2009) Gene Wiki entry for TAL2
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Genomic Viewsfor TAL2 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000009.11 NC_018920.1 NT_008470.19 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the TAL2 gene promoter: Bach2 NF-AT RORalpha1 NF-AT4 POU2F1 NF-AT2 POU2F1a NF-AT3 FOXO1 NF-AT1 Other transcription factors Search SABiosciences Chromatin IP Primers for TAL2 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat TAL2
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 9q32 Ensembl cytogenetic band: 9q31.2 HGNC cytogenetic band: 9q32 TAL2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 9 GeneLoc Exon Structure
GeneLoc location for GC09P108424: view genomic region
(about GC identifiers )
Start:
108,424,738 bp from pter
End:
108,425,393 bp from pter
Size:
656 bases
Orientation:
plus strand
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Proteinsfor TAL2 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: TAL2_HUMAN, Q16559 (See
protein sequence )Recommended Name: T-cell acute lymphocytic leukemia protein 2 Size : 108 amino acids; 12291 Da
Secondary accessions : A0AVI7Explore the universe of human proteins at neXtProt for TAL2: NX_Q16559 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_Q16559 TAL2 Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins: NP_005412.1 ENSEMBL proteins: ENSP00000334547 Human Recombinant Protein Products: TAL2 Antibody Products: Assay Products for TAL2:
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Protein
Domains / Familiesfor TAL2 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
TAL2 for domains About GeneDecksing 1 InterPro domain/family :
Graphical View of Domain Structure for InterPro Entry Q16559 ProtoNet protein and cluster: Q16559
1 Blocks protein family : IPB001092 Basic helix-loop-helix dimerization domain bHLH UniProtKB/Swiss-Prot: TAL2_HUMAN, Q16559 Similarity : Contains 1 bHLH (basic helix-loop-helix) domain
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Functionfor TAL2 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: Genatlas biochemistry entry for TAL2 : helix loop helix protein,homologous to TAL1,involved in T cell acute lymphoblastic leukemia,with translocation t(7;9)(q35;q34) Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for TAL2 (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for TAL2OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: TAL2 (NM_005421 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for TAL2 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat TAL2
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for TAL2
Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0003677 DNA binding
IEA -- GO:0046983 protein dimerization activity
IEA --
TAL2 for ontologies About GeneDecksing Animal Models: 6 MGI mutant phenotypes (inferred from 1 allele ) (MGI details for Tal2) :
TAL2 for phenotypes About GeneDecksing
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Pathways & Interactionsfor TAL2 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for TAL2 STRING Interaction
Network Preview (showing 5 interactants - click image to see 9)5/11 Interacting proteins for TAL2 (Q16559 3 ENSP00000334547 4 ) via UniProtKB, MINT, STRING , and/or I2D (see all 11 )About this table Gene Ontology (GO): 5/7 biological process terms (GO ID links to tree view) (see all 7 ): About this table
TAL2 for ontologies About GeneDecksing
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Drugs & Compoundsfor TAL2 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section Browse Tocris compounds for TAL2 Search CenterWatch for drugs/clinical trials and news about TAL2
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Transcriptsfor TAL2 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for TAL2 gene: NM_005421.2 Unigene Cluster for TAL2:
T-cell acute lymphocytic leukemia 2 Hs.247978 [show with all ESTs ] Unigene Representative Sequence: NM_005421 1 Ensembl transcript including schematic representation, and UCSC links where relevant : ENST00000334077 (uc004bct.3 ) Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for TAL2 (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for TAL2OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: TAL2 (NM_005421 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for TAL2 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat TAL2
Additional cDNA sequence: BC069422.1 BC126373.1 BC126375.1
1 DOTS entry : DT.425314
4 AceView cDNA sequences :
NM_005421 BC069422 AA904907 AA767775 GeneLoc Exon Structure
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Expression for TAL2 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section TAL2 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: AGGAATGTCA
About this image TAL2 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table See TAL2 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for TAL2 SOURCE GeneReport for Unigene cluster: Hs.247978 SABiosciences Custom PCR Arrays for TAL2 Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for TAL2Browse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat TAL2 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat TAL2 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat TAL2 In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for TAL2
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Orthologsfor TAL2 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of animals.
Orthologs for TAL2 gene from 4/13 species (see all 13 ) About this table
Organism
Taxonomic classification
Gene
Description
Human Similarity
Orthology Type
Details
chicken (Gallus gallus)
Aves
TAL21
T-cell acute lymphocytic leukemia 2
76.01(n) 76.64(a)
 
427304 XM_424886.3 XP_424886.1
lizard (Anolis carolinensis)
Reptilia
TAL26
--
78(a)
1 ↔ 1
GL343218.1(1314318-1314641)
zebrafish (Danio rerio)
Actinopterygii
tal21
T-cell acute lymphocytic leukemia 2
60.78(n) 61.76(a)
 
394239 NM_201339.2 NP_958496.2
fruit fly (Drosophila melanogaster)
Insecta
HLH3B6
Helix loop helix protein 3B
12(a)
1 → many
X(2574232-2575756)
ENSEMBL Gene Tree for TAL2 (if available)TreeFam Gene Tree for TAL2 (if available)
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Paralogsfor TAL2 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for TAL2 gene TCF24 2 NHLH1 2 TWIST1 2 TWIST2 2 TAL1 2 HAND2 2 TCF23 2 LYL1 2 NHLH2 2 TCF15 2 SCXB 2 TCF21 2 HAND1 2 MSC 2 SCXA 2 18/23 SIMAP similar genes for TAL2 using alignment to 1 protein entry: TAL2_HUMAN (see all similar genes ):SCL TAL1 tal-1 TWIST2 ATOH7 NHLH1 NHLH2 SCXA SCXB TWIST1 ATOH1 LYL1 HAND2 NEUROD2 NEUROD6 ASCL3 PTF1A TCF15
TAL2 for paralogs About GeneDecksing
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Genomic Variantsfor TAL2 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 9 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for TAL2 (108424738 - 108425393 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for TAL2: --
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing TAL2
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Disorders
/ Diseasesfor TAL2 gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
TAL2 for disorders About GeneDecksing
OMIM gene information: 186855
OMIM disorders : --UniProtKB/Swiss-Prot: TAL2_HUMAN, Q16559
Note=A chromosomal aberration involving TAL2 may be a cause of some T-cell acute lymphoblastic leukemia (T-ALL). Translocation t(7;9)(q34;q32) with TCRB 9 diseases for TAL2 : About MalaCards acute lymphocytic leukemia lymphocytic leukemia acute lymphoblastic leukemia leukemia lymphoblastic leukemia leukemia-2, t-cell acute lymphoblastic stem cell leukemia t-cell leukemia ovarian cancer Genatlas disease: TAL2 acute lymphoblastic leukemia (T cell) with breakpoint in t(7;9)(q35;q34) translocation Tumor Gene Database (TGDB) : TAL2 Export disorders for TAL2 gene to outside databases
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Publicationsfor TAL2 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for TAL2 gene, integrated from 9 sources (see all 15 ): (articles sorted by number of sources associating them with TAL2) Utopia : connect your pdf to the dynamic world of online information
TAL2, a helix-loop-helix gene activated by the (7;9)(q34;q32) translocation in human T-cell leukemia. (PubMed id 1763056) 1 , 2 , 3, 9 Xia Y.... Baer R.J. (1991) Products of the TAL2 oncogene in leukemic T cells: bHLH phosphoproteins with DNA-binding activity. (PubMed id 8152805) 1 , 2 , 9 Xia Y.... Baer R. (1994) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) DNA sequence and analysis of human chromosome 9. (PubMed id 15164053) 1 , 2 Humphray S.J.... Dunham I. (2004) Correlations among ERCC1, XPB, UBE2I, EGF, TAL2 and I LF3 revealed by gene signatures of histological subtypes of patients with epith elial ovarian cancer. (PubMed id 21971700) 1 Guo Y....Yu J.J. (2012) Genome-wide association for abdominal subcutaneous and visceral adipose reveals a novel locus for visceral fat in women. (PubMed id 22589738) 1 Fox C.S....Borecki I.B. (2012) Common genetic variation and performance on standardi zed cognitive tests. (PubMed id 20125193) 1 Cirulli E.T....Goldstein D.B. (2010) An atlas of combinatorial transcriptional regulation in mouse and man. (PubMed id 20211142) 1 Ravasi T....Hayashizaki Y. (2010) Meta-analysis of genome-wide association data identif ies two loci influencing age at menarche. (PubMed id 19448620) 1 Perry J.R....Murabito J.M. (2009) Distinct t(7;9)(q34;q32) breakpoints in healthy individuals and individuals with T-ALL. (PubMed id 12567187) 1 Marculescu R....Nadel B. (2003)
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External Searches for TAL2 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing TAL2 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing TAL2 gene
(According to HUGE )
About This Section --
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Specialized Databases showing TAL2 gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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About This Section Patent Information for TAL2 gene: Search GeneIP for patents involving TAL2 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor TAL2 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
Browse OriGene Antibodies OriGene shRNA RFP for TAL2 OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for TAL2 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for TAL2 OriGene Protein Over-expression Lysate for TAL2 Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for TAL2 Browse 3'-UTR reporter clones for miRNA target validation OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for TAL2 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for TAL2 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs OriGene Purified Protein for TAL2 OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for TAL2 OriGene Custom Protein Services for TAL2 OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat TAL2 QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing TAL2 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat TAL2 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat TAL2 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat TAL2 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat TAL2
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TAL2 Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for TAL2
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Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat TAL2
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Aliases for TAL2
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Disorders / Diseases for TAL2
Domains / Families for TAL2
Drugs / Compounds for TAL2
Expression for TAL2
Function for TAL2
Genomic Views for TAL2
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Orthologs for TAL2
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Pathways / Interactions for TAL2
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Transcripts for TAL2
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