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Aliases & Descriptions for TAL1
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| OTTHUMP00000009563 2 | | OTTHUMP00000009564 2 | | SCL 1, 2, 3, 5 | | TAL-1 3 | | TCL5 2, 3, 5 | | bHLHa17 1, 2 | | tal-1 2 |
| | | Descriptions |
|---|
| Stem cell protein 3 | | T-cell acute lymphocytic leukemia 1 2 | | T-cell leukemia/lymphoma protein 5 3 | | tal-1 product 2 |
|
| | Search outside databases for aliases for TAL1 genePrevious GC identifers: GC01M047308 GC01M046571 GC01M047040 GC01M047051 GC01M047393 |
Summaries for TAL1(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| UniProtKB/Swiss-Prot: TAL1_HUMAN, P17542Function: Implicated in the genesis of hemopoietic malignancies. It may play an important role in hemopoietic differentiation. Serves as a positive regulator of erythroid differentiation (By similarity)Gene Wiki entry for TAL1 |
Genomic Location for TAL1
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the TAL1 gene 
Entrez Gene cytogenetic band: 1p32 Ensembl cytogenetic band: 1p33 HGNC cytogenetic band: 1p32TAL1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 1 GeneLoc Exon Structure GeneLoc location for GC01M047454:
(about GC identifiers)
Start:
|
47,454,550 bp from pter |
End:
|
47,469,974 bp from pter |
Size:
|
15,425 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000001.9 NT_032977.8
| Proteins for TAL1
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: TAL1_HUMAN, P17542 (See
protein sequence)Recommended Name: T-cell acute lymphocytic leukemia protein 1 Size: 331 amino acids; 34271 Da
Subunit: Efficient DNA binding requires dimerization with another bHLH protein. Forms heterodimers with TCF3. Binds to the LIM domain containing protein LMO2 and to DRG1. Can assemble in a complex with LDB1 and LMO2. Component of a TAL-1 complex composed at least of CBFA2T3, LDB1, TAL1 and TCF3 (By similarity)
Subcellular location: Nucleus (By similarity)Alternative splicing: 3 isoforms: P17542-1 P17542-2 P17542-3 (The splicing pattern is cell-lineage dependent)Post-translational modifications:
Phosphorylated on serine residues. Phosphorylation of Ser-122 is strongly stimulated by hypoxia (By similarity)1
Ubiquitinated; subsequent to hypoxia-dependent phosphorylation of Ser-122, ubiquitination targets the protein for rapid degradation via the ubiquitin system. This process may be characteristic for microvascular endothelial cells, since it could not be observed in large vessel endothelial cells (By similarity)1
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_003180.1
ENSEMBL proteins: ENSP00000360951 ENSP00000294339 ENSP00000360950
Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: TAL1 
1 Gene Ontology (GO) cellular component term (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0005634 | nucleus |
ISS | -- | About this table
Antibodies for TAL1: Assays for TAL1: | Protein
Domains/ Families for TAL1(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P17542
ProtoNet protein and cluster: P17542 1 Blocks protein family: IPB001092 Basic helix-loop-helix dimerization domain bHLH
UniProtKB/Swiss-Prot: TAL1_HUMAN, P17542Domain: The helix-loop-helix domain is necessary and sufficient for the interaction with DRG1Similarity: Contains 1 basic helix-loop-helix (bHLH) domain | Gene Function for TAL1
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_003189
Applied Biosystems Silencer® siRNAs for TAL1
Sigma-Aldrich siRNA for TAL1  Sigma-Aldrich shRNA Panels and shRNA for TAL1  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_003189                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_003189                                  untagged cDNA clone in CMV expression vector: NM_003189 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_003189
UniProtKB/Swiss-Prot: TAL1_HUMAN, P17542Function: Implicated in the genesis of hemopoietic malignancies. It may play an important role in hemopoietic differentiation. Serves as a positive regulator of erythroid differentiation (By similarity)12 MGI mutant phenotypes (inferred from 7 alleles ) (MGI details for Tal1):
3 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for TAL1
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
Gene Network CentralTM Interacting Genes and Proteins Network for TAL1 
5/35 Interacting proteins for TAL1 (ENSP000003609503 P175421) via UniProtKB, MINT, and/or STRING (see all 35
)About this table
4 Gene Ontology (GO) biological process terms (links to tree view): About this table
|
Drugs & Compounds for TAL1(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for TAL1 2 Novoseek chemical compound relationships for TAL1 gene
About this table
|
Transcripts for TAL1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_003189
Sigma-Aldrich siRNA for TAL1  Sigma-Aldrich shRNA Panels and shRNA for TAL1  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_003189 REFSEQ mRNAs for TAL1 gene: NM_003189.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_003189               OriGene GFP tagged cDNA clone in CMV expression vector: NM_003189                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_003189                                  untagged cDNA clone in CMV expression vector: NM_003189  Additional cDNA sequence: BC144215.1 M29038.1 M61108.1 S53245.1 X51990.1 5 DOTS entries: DT.87016392 DT.87016391 DT.100752475 DT.121402140 DT.99999943 24/61 AceView cDNA sequences (see all 61
):S53686 S53691 CR624822 S53678 BU687269 W01885 AA699603 AI076543 M61108 H43303 AW300901 NM_003189 W01051 CB044957 W04962 BX449186 CK300042 N71056 AI333301 BU678016 S53245 AA252051 AI123881 BV199247
highest scoring ESTs for TAL1:H43302 H43303 H56303 N74206 S53678 S53691 T97441 W01051 W01885 AA677998 Unigene Cluster for TAL1: T-cell acute lymphocytic leukemia 1 Hs.709194 [show with all ESTs]Unigene Representative Sequence: NM_003189
GeneLoc Exon Structure
4 Alternative Splicing Database (ASD) splice patterns (SP) for TAL1
| ExUns: | 1 | ^ | 2 | ^ | 3a | · | 3b | ^ | 4 | ^ | 5a | · | 5b | ^ | 6 | ^ | 7 | |
| SP1: | |   | |   | - |   | |   | |   | |   | |   | - |   | |   | |
| SP2: | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |
| SP3: | |   | - |   | - |   | - |   | - |   | |   | |   | - |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for TAL1
3 Ensembl transcripts including schematic representations: ENST00000371884
ENST00000294339
ENST00000371883
|
Expression for TAL1
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| TAL1 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for TAL1
1 / 2 / 3 6 probe-sets matching TAL1 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: TGGTGATGAT
SOURCE GeneReport for Unigene cluster: Hs.709194
Expression variation in blood from EXPOLDB for TAL1 UniProtKB/Swiss-Prot: TAL1_HUMAN, P17542Tissue specificity: Leukemic stem cell |
Orthologs for TAL1
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for TAL1 gene from 5/9 species (see all 9
)
About this table Species with no ortholog for TAL1
ENSEMBL Gene Tree for TAL1 | Paralogs for TAL1(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for TAL1 gene
- NHLH12 NHLH22 LYL12 TAL22
|
SNPs/Variants for TAL1(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for TAL1 (up to first 250kb)
|
Disorders & Mutations for TAL1
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 187040 UniProtKB/Swiss-Prot: TAL1_HUMAN, P17542
A chromosomal aberration involving TAL1 may be a cause of some T-cell acute lymphoblastic leukemias (T-ALL). Translocation t(1;14)(p32;q11) with T-cell receptor alpha chain (TCRA) genes10/19 Novoseek disease relationships for TAL1 gene (see all 19
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| t-all |
95.35 |
185 |
9695959 (7), 8208530 (6), 7605997 (5), 9020185 (5) (see all 65) |
| t-cell childhood acute lymphoblastic leukemia |
83.23 |
4 |
9597892 (1), 9950206 (1), 8471769 (1), 8321044 (1) |
| leukemia t-cell |
74.02 |
16 |
16778171 (2), 10625632 (2), 1382561 (1), 9931488 (1) (see all 12) |
| leukemogenesis |
71.89 |
9 |
8437851 (1), 8289805 (1), 7774592 (1), 9020185 (1) (see all 7) |
| erythroleukemia |
69.28 |
12 |
10688671 (2), 1453013 (1), 8943307 (1), 9699481 (1) (see all 6) |
| minimal residual disease |
68.34 |
6 |
10049045 (2), 9950206 (1), 11243385 (1), 11839375 (1) |
| leukemia |
61.87 |
26 |
2040693 (2), 8778337 (2), 7824274 (2), 15917481 (1) (see all 19) |
| acute leukemia |
60.26 |
11 |
10049045 (2), 1311214 (1), 15917481 (1), 8142619 (1) (see all 8) |
| leukaemia lymphocytic |
53.93 |
4 |
2000219 (1), 11839375 (1), 8547631 (1), 8895560 (1) |
| lymphoma lymphoblastic |
46.95 |
4 |
9116269 (1), 9171354 (1) |
About this table
Genatlas disease: TAL1 acute lymphoblastic leukemia (T cell) with interstitial deletion 5' to TAL1 (stem-cell leukemia) or with translocations t(1;14)(p32;q11),t(1;7)(p32;p35),t(1;3)(p34;p21),t(1;5)(p32;q31),see SCL,SIL,TCTA Tumor Gene Database: TAL1
|
Medical News for TAL1(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for TAL1 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/183 PubMed articles for TAL1 gene (see all 183
):- The SCL gene product: a positive regulator of erythroid differentiation. (PubMed id 1396592)1, 3, 4 Aplan P.D.... Kirsch I.R. (1992)
- Coding sequences of the tal-1 gene are disrupted by chromosome translocation in human T cell leukemia. (PubMed id 2230650)1, 3, 4 Chen Q.... Baer R. (1990)
- Products of the TAL1 oncogene: basic helix-loop-helix proteins phosphorylated at serine residues. (PubMed id 8437851)1, 3, 4 Cheng J.-T.... Baer R. (1993)
- The DNA sequence and biological annotation of human chromosome 1. (PubMed id 16710414)3, 4 Gregory S.G.... Bentley D.R. (2006)
- The SCL gene is formed from a transcriptionally complex locus. (PubMed id 2247063)3, 4 Aplan P.D.... Kirsch I.R. (1990)
- The tal gene undergoes chromosome translocation in T cell leukemia and potentially encodes a helix-loop-helix protein. (PubMed id 2303035)3, 4 Chen Q.... Baer R. (1990)
- The gene SCL is expressed during early hematopoiesis and encodes a differentiation-related DNA-binding motif. (PubMed id 2602361)3, 4 Begley C.G....Kirsch I.R. (1989)
- Involvement of the TCL5 gene on human chromosome 1 in T-cell leukemia and melanoma. (PubMed id 2740341)2, 3 Finger L.R....Croce C.M. (1989)
- An scl gene product lacking the transactivation domain induces bony abnormalities and cooperates with LMO1 to generate T-cell malignancies in transgenic mice. (PubMed id 9171354)1, 3 Aplan P.D....Gross K.W. (1997)
- mSin3A regulates murine erythroleukemia cell differentiation through association with the TAL1 (or SCL) transcription factor. (PubMed id 10688671)1, 3 Huang S. and Brandt S.J. (2000)
|
Search for TAL1
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing TAL1
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing TAL1
(According to HUGE)
About This Section
| -- |
Specialized Databases showing TAL1(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for TAL1(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for TAL1:

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Incremental update: 13 Oct 2009
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