Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

TAF8 Gene

protein-coding   GIFtS: 52
GCID: GC06P042018

TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated...

(Previous names: TATA box binding protein (TBP)-associated factor, RNA polymerase...)
(Previous symbol: TBN)
 Explore 1 disease affiliated with
TAF8 via our new
 Human Malady Compendium 
Biological research products
for TAF8
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
TAF8 RNA Polymerase II, TATA Box Binding Protein (TBP)-Associated Factor,
43kDa1 2
     TBP-Associated Factor 82 3
TBN1 2 3     FLJ328211
TAF(II)431 2     Taube Nuss Homolog (Mouse)1
TATA Box Binding Protein (TBP)-Associated Factor, RNA Polymerase II, A,
45/50kDa1 2
     432
Protein Taube Nuss2 3     II2
Transcription Initiation Factor TFIID 43 KDa Subunit2 3     TAF2
TAFII-432 3     Taube Nuss Homolog2
TAFII432 3     TBP-Associated Factor TAFII432
HTAFII431     TBP-Associated Factor, RNA Polymerase II, 43 KD2
TBP-Associated Factor 43 KDa2 3     Transcription Initiation Factor TFIID Subunit 82

External Ids:    HGNC: 173001   Entrez Gene: 1296852   Ensembl: ENSG000001374137   OMIM: 6095145   UniProtKB: Q7Z7C83   

Export aliases for TAF8 gene to outside databases

Previous GC identifers: GC00U991138 GC06P042127 GC06P041736


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for TAF8:
This gene encodes one of several TATA-binding protein (TBP)-associated factors (TAFs), which are integral subunits of
the general transcription factor complex TFIID. TFIID recognizes the core promoter of many genes and nucleates the
assembly of a transcription preinitiation complex containing RNA polymerase II and other initiation factors. The
protein encoded by this gene contains an H4-like histone fold domain, and interacts with several subunits of TFIID
including TBP and the histone-fold protein TAF10. Alternatively spliced transcript variants have been described, but
their biological validity has not been determined. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: TAF8_HUMAN, Q7Z7C8
Function: Transcription factor TFIID is one of the general factors required for accurate and regulated initiation by
RNA polymerase II. Mediates both basal and activator-dependent transcription. Plays a role in the differentiation of
preadipocyte fibroblasts to adipocytes, however, does not seem to play a role in differentiation of myoblasts.
Required for the integration of TAF10 in the TAF complex. May be important for survival of cells of the inner cell
mass which constitute the pluripotent cell population of the early embryo (By similarity)

Gene Wiki entry for TAF8


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000006.11  NC_018917.1  NT_007592.15  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the TAF8 gene promoter:
         c-Fos   TBP   AP-1   TFIID   ATF-2   c-Jun   AP-2gamma   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidTAF8 promoter sequence
   Search SABiosciences Chromatin IP Primers for TAF8

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat TAF8


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 6p21.1   Ensembl cytogenetic band:  6p21.1   HGNC cytogenetic band: 6p21.1

TAF8 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
TAF8 gene location

GeneLoc information about chromosome 6         GeneLoc Exon Structure

GeneLoc location for GC06P042018:  view genomic region     (about GC identifiers)

Start:
42,018,251 bp from pter      End:
42,055,199 bp from pter
Size:
36,949 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: TAF8_HUMAN, Q7Z7C8 (See protein sequence)
Recommended Name: Transcription initiation factor TFIID subunit 8  
Size: 310 amino acids; 34262 Da
Subunit: TFIID is composed of TATA binding protein (TBP) and a number of TBP-associated factors (TAFs). Interacts with
TBP, TAF1, TAF6, TAF10, TAF11 and TAF13. Component also of a small TAF complex (SMAT) containing TAF8, TAF10 and
SUPT7L. Forms a heterodimer with TAF10. Interaction with TAF10 is mediated mainly via its histone fold domain while
interaction with SUPT7L is via its C-terminal region
Subcellular location: Nucleus. Cytoplasm (By similarity). Note=Localized in the cytoplasm and transported from the
cytoplasm to the nucleus in some cells, possibly depending on the functional or developmental state of the cell (By
similarity)
Miscellaneous: 'Taube nuss' means "empty nut' in German
Sequence caution: Sequence=BAB71460.1; Type=Frameshift; Positions=240;
Secondary accessions: Q5T0K1 Q8N4R9 Q96M52
Alternative splicing: 3 isoforms:  Q7Z7C8-1   Q7Z7C8-2   Q7Z7C8-4   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for TAF8: NX_Q7Z7C8

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q7Z7C8

  • TAF8 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_612639.2  
    ENSEMBL proteins: 
     ENSP00000362069   ENSP00000411900   ENSP00000417867   ENSP00000362073   ENSP00000362068  
     ENSP00000417760   ENSP00000418029   ENSP00000417738  

    Human Recombinant Protein Products: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
    OriGene Protein Over-expression Lysate: TAF8
    OriGene Custom Protein Services for TAF8 
    GenScript Custom Purified and Recombinant Proteins Services for TAF8
    Novus Biologicals TAF8 Protein
    Novus Biologicals TAF8 Lysates
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for TAF8

    Gene Ontology (GO): 5 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus IDA--
    GO:0005669transcription factor TFIID complex IDA14580349
    GO:0005730NOT nucleolus IDA--
    GO:0005737cytoplasm ----
    GO:0048471perinuclear region of cytoplasm IDA15870280


    TAF8 for ontologies           About GeneDecksing



    TAF8 Antibody Products: 
    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Browse R&D Systems for Antibodies
    Browse OriGene Antibodies
    OriGene Custom Antibody Services for TAF8 
    GenScript Custom Superior Antibodies Services for TAF8
    Novus Biologicals TAF8 Antibodies
    Search for Antibodies for TAF8 at Abcam  
    Uscn Antibodies for TAF8
    Search ThermoFisher Antibodies for TAF8

    Assay Products for TAF8: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for TAF8
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for TAF8


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    TAF8 for domains           About GeneDecksing

    3 InterPro domains/families:
     IPR006565 BTP
     IPR019473 TFIID_su8_C
     IPR009072 Histone-fold

    Graphical View of Domain Structure for InterPro Entry Q7Z7C8

    ProtoNet protein and cluster: Q7Z7C8

    UniProtKB/Swiss-Prot: TAF8_HUMAN, Q7Z7C8
    Domain: Ectopic expression of the histone fold domain acts as a dominant-negative mutant resulting in differentiation
    inhibition
    Similarity: Belongs to the TAF8 family
    Similarity: Contains 1 histone-fold domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: TAF8_HUMAN, Q7Z7C8
    Function: Transcription factor TFIID is one of the general factors required for accurate and regulated initiation by
    RNA polymerase II. Mediates both basal and activator-dependent transcription. Plays a role in the differentiation of
    preadipocyte fibroblasts to adipocytes, however, does not seem to play a role in differentiation of myoblasts.
    Required for the integration of TAF10 in the TAF complex. May be important for survival of cells of the inner cell
    mass which constitute the pluripotent cell population of the early embryo (By similarity)
    Induction: Induced with triglyceride accumulation

    miRNA
    Products:
        
    Browse 3'-UTR reporter clones for miRNA target validation
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat TAF8
    8/17 QIAGEN miScript miRNA Assays for microRNAs that regulate TAF8 (see all 17):
    hsa-miR-520d-5p hsa-miR-340 hsa-miR-29b-1* hsa-miR-105 hsa-miR-3150b-3p hsa-miR-3121-3p hsa-miR-580 hsa-miR-3163
    SwitchGear 3'UTR luciferase reporter plasmidTAF8 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for TAF8 (see all 3)
    Browse OriGene siRNA
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat TAF8

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for TAF8

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for TAF8 (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for TAF8
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: TAF8 (NM_138572)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for TAF8
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat TAF8 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for TAF8
    Search LifeMap BioReagents cell lines for TAF8

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for TAF8

    Gene Ontology (GO): 3 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003677DNA binding ----
    GO:0005515protein binding IPI15870280
    GO:0046982protein heterodimerization activity IEA--


    TAF8 for ontologies           About GeneDecksing


    Animal Models:
         2 MGI mutant phenotypes (inferred from 1 allele(MGI details for Taf8):
     embryogenesis  mortality/aging 

    TAF8 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1HIV Infection
    Transcription Ligand-Dependent Transcription of Retinoid-Target genes0.28
    Transcription_Ligand-Dependent Transcription of Retinoid-Target genes0.28
    2Assembly of RNA Polymerase-II Initiation Complex
    Basal transcription factors0.49

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    1 EMD Millipore Pathway for TAF8
        Transcription Ligand-Dependent Transcription of Retinoid-Target genes


    1 GeneGo (Thomson Reuters) Pathway for TAF8
        Transcription Ligand-Dependent Transcription of Retinoid-Target genes


    1         Kegg Pathway  (Kegg details for TAF8):
        Basal transcription factors


    TAF8 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for TAF8

    STRING Interaction Network Preview (showing 5 interactants - click image to see 23)

    5/23 Interacting proteins for TAF8 (Q7Z7C83 ENSP000003620684) via UniProtKB, MINT, STRING, and/or I2D (see all 23)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    TAF9Q165943, ENSP000002178934I2D: score=2 STRING: ENSP00000370201 STRING: ENSP00000217893
    TAF5Q155423, ENSP000003588544I2D: score=3 STRING: ENSP00000358854
    TAF1P216753, ENSP000002760724I2D: score=2 STRING: ENSP00000276072
    TAF11Q155443, ENSP000003546334I2D: score=2 STRING: ENSP00000354633
    TAF2Q6P1X53, ENSP000003674064I2D: score=2 STRING: ENSP00000367406
    About this table

    Gene Ontology (GO): 5/6 biological process terms (GO ID links to tree view) (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0001833inner cell mass cell proliferation IEA--
    GO:0006351transcription, DNA-dependent IEA--
    GO:0030154cell differentiation IEA--
    GO:0045598regulation of fat cell differentiation IDA14580349
    GO:0045893positive regulation of transcription, DNA-dependent IDA14580349


    TAF8 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for TAF8
    Search CenterWatch for drugs/clinical trials and news about TAF8 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for TAF8 gene: 
    NM_138572.2  

    Unigene Cluster for TAF8:

    TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa
    Hs.520122  [show with all ESTs]
    Unigene Representative Sequence: NM_138572
    10 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000372978(uc003orr.3) ENST00000456846 ENST00000494547 ENST00000372982(uc003oru.1 uc003orv.1)
    ENST00000372977(uc003ors.3 uc003ort.3 uc011dun.2) ENST00000472818
    ENST00000486070 ENST00000482926 ENST00000465926 ENST00000482432

    miRNA
    Products:
         
    Browse 3'-UTR reporter clones for miRNA target validation
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat TAF8
    8/17 QIAGEN miScript miRNA Assays for microRNAs that regulate TAF8 (see all 17):
    hsa-miR-520d-5p hsa-miR-340 hsa-miR-29b-1* hsa-miR-105 hsa-miR-3150b-3p hsa-miR-3121-3p hsa-miR-580 hsa-miR-3163
    SwitchGear 3'UTR luciferase reporter plasmidTAF8 3' UTR sequence
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for TAF8 (see all 3)
    Browse OriGene siRNA
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat TAF8
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for TAF8 (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for TAF8
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: TAF8 (NM_138572)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for TAF8
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat TAF8 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for TAF8
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat TAF8
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat TAF8
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat TAF8

    Additional cDNA sequence: 

    AF086309.1 AF465841.1 AK057383.1 AK303097.1 AL833401.1 BC119678.1 BC119679.1 

    16 DOTS entries:

    DT.100773233  DT.421486  DT.121342217  DT.108065  DT.97795211  DT.97846170  DT.40292936  DT.75145214 
    DT.95150036  DT.97846169  DT.121342110  DT.92036337  DT.95357755  DT.97812883  DT.97846168  DT.121342254 

    24/128 AceView cDNA sequences (see all 128):

    BM758722 BM758723 BM770626 BM785433 CD636440 CD514233 BM755747 BM758732 
    BM741104 BM759016 BF432334 BM758051 BU189966 BM741109 BM749804 BM756230 
    CD636453 AW815571 BQ437299 BM758910 BM750602 BM758085 BM746812 BM758091 

    GeneLoc Exon Structure

    5/8 Alternative Splicing Database (ASD) splice patterns (SP) for TAF8 (see all 8)    About this scheme

    ExUns: 1a · 1b · 1c · 1d ^ 2 ^ 3a · 3b ^ 4 ^ 5a · 5b ^ 6 ^ 7a · 7b ^ 8 ^ 9a · 9b ^ 10 ^ 11 ^ 12 ^ 13a · 13b
    SP1:                          -           -                 -                 -     -           -                                 
    SP2:                          -           -                 -                 -                                                   
    SP3:                          -           -                 -                                                                     
    SP4:                                      -                 -                                                                     
    SP5:                          -           -                                                                                       


    ECgene alternative splicing isoforms for TAF8

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    TAF8 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: CAGATTAAAA

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image

    TAF8 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    1 LifeMap In Vivo Development Anatomical Compartment/Cell 
    Tissue Anatomical Compartment CellCategory (developmental path)
    Inner Cell MassInner Cell MassInner Cell Mass CellsEarly Embryo
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    See TAF8 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for TAF8

    SOURCE GeneReport for Unigene cluster: Hs.520122
        SABiosciences Custom PCR Arrays for TAF8
    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for TAF8
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat TAF8
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat TAF8
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat TAF8
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for TAF8

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for TAF8 gene from 7/21 species (see all 21)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Taf81 , 5 TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated more1, 5 89.83(n)1
    95.13(a)1
      17 (23.33 cM)5
    638561  NM_022015.31  NP_071298.11 
     474880505 
    chicken
    (Gallus gallus)
    Aves TAF81 TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated more 82.38(n)
    94.26(a)
      419929  NM_001030923.1  NP_001026094.1 
    lizard
    (Anolis carolinensis)
    Reptilia TAF86
    --
    91(a)
    1 ↔ 1
    4(119140502-119150508)
    African clawed frog
    (Xenopus laevis)
    Amphibia tbn-prov2 taube nuss 77.06(n)    BC043877.1 
    zebrafish
    (Danio rerio)
    Actinopterygii zgc564012 similar to taube nuss 74.7(n)   393256  BC049422.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta Taf81 TBP-associated factor 8 51.39(n)
    43.94(a)
      32792  NM_078673.3  NP_523397.1 
    worm
    (Caenorhabditis elegans)
    Secernentea taf-86
    TAF (TBP-associated transcription factor) family m...
    15(a)
    1 ↔ 1
    II(9669265-9671440)


    ENSEMBL Gene Tree for TAF8 (if available)
    TreeFam Gene Tree for TAF8 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
      --

    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/566 NCBI SNPs in TAF8 are shown (see all 566    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 6 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs624158931,2
    C,--42018640(+) ATATTT/GAGCTT 1 -- int13Minor allele frequency- G:0.18NA EA 242
    rs77658901,2
    C,H,--42018653(+) TTACTT/GTTTTG 1 -- int14Minor allele frequency- G:0.00NS EA 522
    rs77701491,2
    C,H,--42018878(+) GGGACC/TGTACG 1 -- int112Minor allele frequency- T:0.02NA WA CSA EA 374
    rs119673781,2
    C,F,A,H,--42018883(+) TGTACG/TTTTTA 1 -- int119Minor allele frequency- T:0.24NS EA NA WA 2522
    rs1826124491,2
    --42018906(+) AGTGGG/TCTCTG 1 -- int10--------
    rs1380167371,2
    --42018929(+) CTTGGA/GTGCTC 1 -- int10--------
    rs1495157141,2
    --42018936(+) GCTCAA/GTTTTT 1 -- int10--------
    rs2015853101,2
    F--42019037(+) CACGTA/GTGAAC 1 -- int11Minor allele frequency- G:0.00EU 593
    rs747104241,2
    C,--42019120(+) CACTAA/CCCCTG 2 N T mis10--------
    rs1439133541,2
    C,--42019270(+) AACACC/TTGGCC 1 -- int10--------

    HapMap Linkage Disequilibrium report for TAF8 (42018251 - 42055199 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for TAF8: --

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing TAF8
    DNA2.0 Custom Variant and Variant Library Synthesis for TAF8

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    TAF8 for disorders           About GeneDecksing

    OMIM gene information: 609514    OMIM disorders: --

    1 disease for TAF8:    About MalaCards
    immunodeficiency

    Human Genome Epidemiology (HuGE) Navigator: TAF8 (1 document)

    Export disorders for TAF8 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for TAF8 gene, integrated from 9 sources (see all 23):
    (articles sorted by number of sources associating them with TAF8)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Identification of a small TAF complex and its role in the assembly of TAF-containing complexes. (PubMed id 17375202)1, 2, 9 Demeny M.A.... Tora L. (2007)
    2. The TBN protein, which is essential for early embryonic mouse development, is an inducible TAFII implicated in adipogenesis. (PubMed id 14580349)1, 2, 9 Guermah M.... Roeder R.G. (2003)
    3. The nuclear import of TAF10 is regulated by one of its three histone fold domain-containing interaction partners. (PubMed id 15870280)1, 2 Soutoglou E....Tora L. (2005)
    4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
    5. Genomics and transcription analysis of human TFIID. (PubMed id 9569032)1, 9 Purrello M....Roeder R. (1998)
    6. Transcriptomic and genetic studies identify IL-33 as a candidate gene for Alzheimer's disease. (PubMed id 19204726)1 Chapuis J....Lambert J.C. (2009)
    7. STAGA recruits Mediator to the MYC oncoprotein to stimulate transcription and cell proliferation. (PubMed id 17967894)1 Liu X....Martinez E. (2008)
    8. Toward a confocal subcellular atlas of the human proteome. (PubMed id 18029348)1 Barbe L....Andersson-Svahn H. (2008)
    9. A quantitative atlas of mitotic phosphorylation. (PubMed id 18669648)2 Dephoure N.... Gygi S.P. (2008)
    10. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)2 Gerhard D.S....Malek J. (2004)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 129685 HGNC: 17300 AceView: TBN Ensembl:ENSG00000137413 euGenes: HUgn129685
    ECgene: TAF8 Kegg: 129685 H-InvDB: TAF8

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for TAF8 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for TAF8 gene:
    Search GeneIP for patents involving TAF8

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
    In Situ Hybridization Assays from
    Advanced Cell Diagnostics
    About This Section

     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Browse Antibodies   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
     Browse OriGene Antibodies   Browse OriGene shRNA RFPs  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for TAF8   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for TAF8  
     OriGene Protein Over-expression Lysate for TAF8   Browse OriGene Fluorogenic Cell Assay Kits  
     Browse OriGene siRNAs   Browse 3'-UTR reporter clones for miRNA target validation  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for TAF8   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for TAF8  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     Browse OriGene full length recombinant human proteins expressed in human HEK293 cells   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for TAF8   OriGene Custom Protein Services for TAF8  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat TAF8
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing TAF8
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat TAF8
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat TAF8
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat TAF8
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat TAF8
     GenScript Custom Purified and Recombinant Proteins Services for TAF8 GenScript cDNA clones with any tag delivered in your preferred vector for TAF8
     GenScript Custom Assay Services for TAF8 GenScript Custom Superior Antibodies Services for TAF8
     GenScript Custom overexpressing Cell Line Services for TAF8 CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Search for Antibodies & Assays

     Regulatory tfbs in TAF8 promoter
     Search Chromatin IP Primers for TAF8
     RT2 qPCR Primer Assay in human, mouse, rat TAF8
     GNC Network for TAF8
     SABiosciences Custom PCR Arrays for TAF8
     Search Tocris compounds for TAF8
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological cDNA Clones
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     TAF8 antibodies
     TAF8 proteins
     TAF8 lysates
     Search for Antibodies for TAF8 at Abcam
     See all of Abcam's Antibodies, Kits and Proteins for TAF8
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins




     TAF8 Proteins, Antibodies, CLIAs, and ELISAs
     Search LifeMap BioReagents cell lines for TAF8
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for TAF8
     SwitchGear 3'UTR luciferase reporter plasmids for TAF8
     SwitchGear Promoter luciferase reporter plasmids for TAF8
     Search ThermoFisher Antibodies for TAF8
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat TAF8
           
    GeneCards Homepage - Last full update: 18 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      TAF8 gene at Home site.
    hostname: 356977-web1.xennexinc.com index build: 100 solr: 1.4