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Aliases for TAF5LP1 Gene

Aliases for TAF5LP1 Gene

  • TATA-Box Binding Protein Associated Factor 5 Like Pseudogene 1 2 3
  • TAF5-Like RNA Polymerase II, P300/CBP-Associated Factor (PCAF)-Associated Factor, 65kDa Pseudogene 1 2 3
  • TAF5-Like RNA Polymerase II Pseudogene 2 3
  • RP11-1094M14.8 5
  • HsT33855 3
  • TAF5LP 3

External Ids for TAF5LP1 Gene

Previous HGNC Symbols for TAF5LP1 Gene

  • TAF5LP

Previous GeneCards Identifiers for TAF5LP1 Gene

  • GC17P030010
  • GC17P033827

Summaries for TAF5LP1 Gene

GeneCards Summary for TAF5LP1 Gene

TAF5LP1 (TATA-Box Binding Protein Associated Factor 5 Like Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TAF5LP1 Gene

Genomics for TAF5LP1 Gene

Regulatory Elements for TAF5LP1 Gene

Enhancers for TAF5LP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17G035533 1.9 FANTOM5 Ensembl ENCODE dbSUPER 6.8 +39.5 39457 9.0 HDGF PKNOX1 ATF1 ARNT WRNIP1 ZNF2 YY1 TCF12 ZNF143 KLF13 AP2B1 SLFN12L CCL5 PEX12 SLFN5 TAF5LP1 GAS2L2 SLFN11 CCL14 RFFL
GH17G036084 1.4 Ensembl ENCODE dbSUPER 4.8 +587.0 587033 2.3 PKNOX1 NFRKB ZSCAN4 RAD21 TCF12 GATA2 FOS ELF4 CEBPB ELF1 CCL4 TAF5LP1 CCL3 ENSG00000277089
GH17G035498 0.6 FANTOM5 0.7 -0.2 -226 0.4 RNF2 SUZ12 CBX2 EZH2 SLFN12L AP2B1 CCL5 SLFN5 TAF5LP1 E2F3P1
GH17G035496 0.6 ENCODE 0.7 -1.7 -1700 0.2 RNF2 SUZ12 CHD1 CBX2 CTBP2 EZH2 SLFN12L TAF5LP1 E2F3P1
GH17G035497 0.5 ENCODE 0.7 -2.1 -2060 0.2 RNF2 SUZ12 CBX2 EZH2 SLFN12L TAF5LP1 E2F3P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TAF5LP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TAF5LP1 Gene

Chromosome:
17
Start:
35,498,216 bp from pter
End:
35,499,181 bp from pter
Size:
966 bases
Orientation:
Plus strand

Genomic View for TAF5LP1 Gene

Genes around TAF5LP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TAF5LP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TAF5LP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TAF5LP1 Gene

Proteins for TAF5LP1 Gene

Post-translational modifications for TAF5LP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TAF5LP1 Gene

Domains & Families for TAF5LP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TAF5LP1 Gene

Function for TAF5LP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TAF5LP1 Gene

Localization for TAF5LP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TAF5LP1 Gene

Pathways & Interactions for TAF5LP1 Gene

SuperPathways for TAF5LP1 Gene

No Data Available

Interacting Proteins for TAF5LP1 Gene

Gene Ontology (GO) - Biological Process for TAF5LP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TAF5LP1 Gene

Transcripts for TAF5LP1 Gene

mRNA/cDNA for TAF5LP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TAF5LP1 Gene

No ASD Table

Relevant External Links for TAF5LP1 Gene

GeneLoc Exon Structure for
TAF5LP1
ECgene alternative splicing isoforms for
TAF5LP1

Expression for TAF5LP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TAF5LP1 Gene

mRNA differential expression in normal tissues according to GTEx for TAF5LP1 Gene

This gene is overexpressed in Whole Blood (x14.8) and Spleen (x7.7).

NURSA nuclear receptor signaling pathways regulating expression of TAF5LP1 Gene:

TAF5LP1
genes like me logo Genes that share expression patterns with TAF5LP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TAF5LP1 Gene

Orthologs for TAF5LP1 Gene

Evolution for TAF5LP1 Gene

ENSEMBL:
Gene Tree for TAF5LP1 (if available)
TreeFam:
Gene Tree for TAF5LP1 (if available)

No data available for Orthologs for TAF5LP1 Gene

Paralogs for TAF5LP1 Gene

No data available for Paralogs for TAF5LP1 Gene

Variants for TAF5LP1 Gene

Relevant External Links for TAF5LP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TAF5LP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TAF5LP1 Gene

Disorders for TAF5LP1 Gene

No disorders were found for TAF5LP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TAF5LP1 Gene

Publications for TAF5LP1 Gene

No publications were found for TAF5LP1 Gene.

Products for TAF5LP1 Gene

Sources for TAF5LP1 Gene

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