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Aliases for TACSTD2 Gene

Aliases for TACSTD2 Gene

  • Tumor-Associated Calcium Signal Transducer 2 2 3
  • Membrane Component Chromosome 1 Surface Marker 1 3 4
  • Pancreatic Carcinoma Marker Protein GA733-1 3 4
  • Cell Surface Glycoprotein Trop-2 3 4
  • GA733-1 3 4
  • TROP2 3 4
  • M1S1 3 4
  • 40kD Glycoprotein, Identified By Monoclonal Antibody GA733 3
  • Membrane Component, Chromosome 1, Surface Marker 1 3
  • Gastrointestinal Tumor-Associated Antigen GA7331 3
  • Pancreatic Carcinoma Marker Protein GA7331 3
  • Cell Surface Glycoprotein TROP2 3
  • Epithelial Glycoprotein-1 3
  • GA7331 3
  • EGP-1 3
  • EGP1 3
  • GP50 3

External Ids for TACSTD2 Gene

Previous HGNC Symbols for TACSTD2 Gene

  • M1S1

Previous GeneCards Identifiers for TACSTD2 Gene

  • GC01M058957
  • GC01M057955
  • GC01M058398
  • GC01M058411
  • GC01M058412
  • GC01M058752
  • GC01M058813
  • GC01M059041
  • GC01M057151

Summaries for TACSTD2 Gene

Entrez Gene Summary for TACSTD2 Gene

  • This intronless gene encodes a carcinoma-associated antigen. This antigen is a cell surface receptor that transduces calcium signals. Mutations of this gene have been associated with gelatinous drop-like corneal dystrophy.[provided by RefSeq, Dec 2009]

GeneCards Summary for TACSTD2 Gene

TACSTD2 (Tumor-Associated Calcium Signal Transducer 2) is a Protein Coding gene. Diseases associated with TACSTD2 include corneal dystrophy, gelatinous drop-like and lattice corneal dystrophy. GO annotations related to this gene include receptor activity. An important paralog of this gene is EPCAM.

UniProtKB/Swiss-Prot for TACSTD2 Gene

  • May function as a growth factor receptor

Gene Wiki entry for TACSTD2 Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TACSTD2 Gene

Genomics for TACSTD2 Gene

Regulatory Elements for TACSTD2 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for TACSTD2 Gene

58,575,423 bp from pter
58,577,773 bp from pter
2,351 bases
Minus strand

Genomic View for TACSTD2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TACSTD2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TACSTD2 Gene

Proteins for TACSTD2 Gene

  • Protein details for TACSTD2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Tumor-associated calcium signal transducer 2
    Protein Accession:
    Secondary Accessions:
    • Q15658
    • Q6FG48
    • Q7Z7Q4
    • Q96QD2

    Protein attributes for TACSTD2 Gene

    323 amino acids
    Molecular mass:
    35709 Da
    Quaternary structure:
    No Data Available

    Three dimensional structures from OCA and Proteopedia for TACSTD2 Gene

neXtProt entry for TACSTD2 Gene

Proteomics data for TACSTD2 Gene at MOPED

Post-translational modifications for TACSTD2 Gene

Other Protein References for TACSTD2 Gene

ENSEMBL proteins:
REFSEQ proteins:

Antibody Products

No data available for DME Specific Peptides for TACSTD2 Gene

Domains & Families for TACSTD2 Gene

Protein Domains for TACSTD2 Gene


Graphical View of Domain Structure for InterPro Entry



  • Contains 1 thyroglobulin type-1 domain.
  • Belongs to the EPCAM family.
  • Contains 1 thyroglobulin type-1 domain.
  • Belongs to the EPCAM family.
genes like me logo Genes that share domains with TACSTD2: view

No data available for Gene Families for TACSTD2 Gene

Function for TACSTD2 Gene

Molecular function for TACSTD2 Gene

UniProtKB/Swiss-Prot Function:
May function as a growth factor receptor

Gene Ontology (GO) - Molecular Function for TACSTD2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004872 receptor activity TAS 7665234
GO:0005515 protein binding IPI 15607035
genes like me logo Genes that share ontologies with TACSTD2: view
genes like me logo Genes that share phenotypes with TACSTD2: view

Animal Models for TACSTD2 Gene

MGI Knock Outs for TACSTD2:

Animal Model Products

CRISPR Products

miRNA for TACSTD2 Gene

miRTarBase miRNAs that target TACSTD2

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for TACSTD2

In Situ Assay Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Transcription Factor Targets and HOMER Transcription for TACSTD2 Gene

Localization for TACSTD2 Gene

Subcellular locations from UniProtKB/Swiss-Prot for TACSTD2 Gene

Membrane; Single-pass type I membrane protein.

Subcellular locations from

Jensen Localization Image for TACSTD2 Gene COMPARTMENTS Subcellular localization image for TACSTD2 gene
Compartment Confidence
extracellular 5
cytosol 4
plasma membrane 4
cytoskeleton 2
nucleus 2
lysosome 1
mitochondrion 1

Gene Ontology (GO) - Cellular Components for TACSTD2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005615 extracellular space IEA --
GO:0005634 nucleus IEA --
GO:0005829 cytosol TAS 10192395
GO:0005886 plasma membrane --
GO:0005887 integral component of plasma membrane TAS 7665234
genes like me logo Genes that share ontologies with TACSTD2: view

Pathways & Interactions for TACSTD2 Gene

SuperPathways for TACSTD2 Gene

No Data Available

PCR Array Products

  • Pathway & Disease-focused RT² Profiler PCR Arrays

Gene Ontology (GO) - Biological Process for TACSTD2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007166 cell surface receptor signaling pathway TAS 7665234
GO:0007601 visual perception IEA --
GO:0008283 cell proliferation TAS 7665234
GO:0010633 negative regulation of epithelial cell migration ISS --
GO:0050678 regulation of epithelial cell proliferation IEA --
genes like me logo Genes that share ontologies with TACSTD2: view

No data available for Pathways by source and SIGNOR curated interactions for TACSTD2 Gene

Drugs & Compounds for TACSTD2 Gene

(3) Drugs for TACSTD2 Gene - From: DGIdb and NovoSeek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
IMMU-132 Pharma inhibitor TROP2-targeted TOPO I inhibitor 0
alanine Nutra 97
Calcium Nutra 0

(1) Additional Compounds for TACSTD2 Gene - From: NovoSeek

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
genes like me logo Genes that share compounds with TACSTD2: view

Transcripts for TACSTD2 Gene

mRNA/cDNA for TACSTD2 Gene

(1) REFSEQ mRNAs :
(5) Additional mRNA sequences :
(302) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TACSTD2 Gene

Tumor-associated calcium signal transducer 2:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for TACSTD2

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for TACSTD2 Gene

No ASD Table

Relevant External Links for TACSTD2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for TACSTD2 Gene

mRNA expression in normal human tissues for TACSTD2 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for TACSTD2 Gene

This gene is overexpressed in Esophagus - Mucosa (x14.5), Minor Salivary Gland (x9.4), Skin - Not Sun Exposed (Suprapubic) (x5.5), Skin - Sun Exposed (Lower leg) (x5.5), and Vagina (x4.9).

Protein differential expression in normal tissues from HIPED for TACSTD2 Gene

This gene is overexpressed in Nasal epithelium (53.3) and Liver (6.3).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MOPED, and MaxQB for TACSTD2 Gene

SOURCE GeneReport for Unigene cluster for TACSTD2 Gene Hs.23582

mRNA Expression by UniProt/SwissProt for TACSTD2 Gene

Tissue specificity: Placenta, pancreatic carcinoma cell lines
genes like me logo Genes that share expression patterns with TACSTD2: view

Primer Products

In Situ Assay Products

No data available for Protein tissue co-expression partners for TACSTD2 Gene

Orthologs for TACSTD2 Gene

This gene was present in the common ancestor of chordates.

Orthologs for TACSTD2 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia TACSTD2 35
  • 86.31 (n)
  • 80.25 (a)
  • 77 (a)
(Canis familiaris)
Mammalia TACSTD2 35
  • 88.13 (n)
  • 83.56 (a)
(Mus musculus)
Mammalia Tacstd2 35
  • 81.94 (n)
  • 80.6 (a)
Tacstd2 16
Tacstd2 36
  • 78 (a)
(Pan troglodytes)
Mammalia TACSTD2 35
  • 99.78 (n)
  • 100 (a)
  • 99 (a)
(Rattus norvegicus)
Mammalia Tacstd2 35
  • 82.22 (n)
  • 81.33 (a)
(Monodelphis domestica)
Mammalia TACSTD2 36
  • 65 (a)
(Gallus gallus)
Aves TACSTD2 35
  • 52.41 (n)
  • 46.29 (a)
  • 45 (a)
(Anolis carolinensis)
Reptilia TACSTD2 36
  • 52 (a)
(Danio rerio)
Actinopterygii epcam 36
  • 35 (a)
Species with no ortholog for TACSTD2:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for TACSTD2 Gene

Gene Tree for TACSTD2 (if available)
Gene Tree for TACSTD2 (if available)

Paralogs for TACSTD2 Gene

Paralogs for TACSTD2 Gene

(1) SIMAP similar genes for TACSTD2 Gene using alignment to 3 proteins:

genes like me logo Genes that share paralogs with TACSTD2: view

Variants for TACSTD2 Gene

Sequence variations from dbSNP and Humsavar for TACSTD2 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs1020 -- 58,575,920(-) CAGTG(A/C/T)AGGAA utr-variant-3-prime
rs3551 -- 58,575,905(-) TGGCA(C/T)AGCGT utr-variant-3-prime
rs7333 -- 58,575,548(-) TTACT(A/G)CCACT utr-variant-3-prime
rs9583 -- 58,575,764(-) ATTTG(A/G)TGAGT utr-variant-3-prime
rs13267 -- 58,576,758(-) GGCGT(C/G)CGCCG synonymous-codon, reference

Variation tolerance for TACSTD2 Gene

Residual Variation Intolerance Score: 64.81% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 8.41; 85.58% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for TACSTD2 Gene

HapMap Linkage Disequilibrium report
Human Gene Mutation Database (HGMD)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for TACSTD2 Gene

Disorders for TACSTD2 Gene

MalaCards: The human disease database

(9) MalaCards diseases for TACSTD2 Gene - From: OMIM, ClinVar, GeneTests, Orphanet, DISEASES, NovoSeek, and GeneCards

Disorder Aliases PubMed IDs
corneal dystrophy, gelatinous drop-like
  • amyloidosis corneal
lattice corneal dystrophy
  • lattice corneal dystrophy [ambiguous]
seizures, benign familial infantile, 3
  • benign familial neonatal-infantile seizures
  • teniasis
corneal degeneration
- elite association


  • Corneal dystrophy, gelatinous drop-like (GDLD) [MIM:204870]: A form of lattice corneal dystrophy, a class of inherited stromal amyloidoses characterized by pathognomonic branching lattice figures in the cornea. GDLD is an autosomal recessive disorder characterized by severe corneal amyloidosis leading to blindness. Clinical manifestations, which appear in the first decade of life, include blurred vision, photophobia, and foreign-body sensation. By the third decade, raised, yellowish-gray, gelatinous masses severely impair visual acuity. {ECO:0000269 PubMed:10192395}. Note=The disease is caused by mutations affecting the gene represented in this entry.

Relevant External Links for TACSTD2

Genetic Association Database (GAD)
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
genes like me logo Genes that share disorders with TACSTD2: view

No data available for Genatlas for TACSTD2 Gene

Publications for TACSTD2 Gene

  1. Retroposition in a family of carcinoma-associated antigen genes. (PMID: 8382772) Linnenbach A.J. … Huebner K. (Mol. Cell. Biol. 1993) 2 23 67
  2. Identification and characterization of a novel TACSTD2 mutation in gelatinous drop-like corneal dystrophy. (PMID: 20454699) Paliwal P. … Vajpayee R.B. (Mol. Vis. 2010) 23 67
  3. Corneal dystrophies. (PMID: 19236704) Klintworth G.K. (Orphanet J Rare Dis 2009) 23 67
  4. A novel TACSTD2 mutation identified in two Chinese brothers with gelatinous drop-like corneal dystrophy. (PMID: 19693293) Jing Y. … Wang L. (Mol. Vis. 2009) 23 67
  5. A bicistronic CYCLIN D1-TROP2 mRNA chimera demonstrates a novel oncogenic mechanism in human cancer. (PMID: 18829570) Guerra E. … Alberti S. (Cancer Res. 2008) 23 67

Products for TACSTD2 Gene

Sources for TACSTD2 Gene

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