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TACR2 Gene

protein-coding   GIFtS: 62

GC10M070834
tachykinin receptor 2
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
(Previous symbols: TAC2R, NKNAR)
Services    
(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc , and/or 7Ensembl, 8miRBase)
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Aliases
NK-2R 3
NK2R 1, 2, 3
NKNAR 2, 3, 5
OTTHUMP00000019722 2
SKR 1, 2, 3
TAC2R 2, 3, 5
Descriptions
NK-2 receptor 2, 3
Neurokinin A receptor 2, 3
neurokinin 2 receptor 2
seven transmembrane helix receptor 2
substance K receptor 2
tachykinin receptor 2 2, 3
External Ids
HGNC: 115271
Entrez Gene: 68652
UniProtKB: P214523
Ensembl: ENSG000000750737
Search outside databases for aliases for TACR2 gene

Previous GC identifers: GC10M069975 GC10M070250 GC10M071056 GC10M070509

(According to Entrez Gene, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
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EntrezGene summary for TACR2:
This gene belongs to a family of genes that function as receptors for tachykinins. Receptor
affinities are specified by variations in the 5'-end of the sequence. The receptors belonging
to this family are characterized by interactions with G proteins and 7 hydrophobic transmembrane
regions. This gene encodes the receptor for the tachykinin neuropeptide substance K, also referred
to as neurokinin A. [provided by RefSeq]

UniProtKB/Swiss-Prot: NK2R_HUMAN, P21452
Function: This is a receptor for the tachykinin neuropeptide substance K (neurokinin A). It is
associated with G proteins that activate a phosphatidylinositol-calcium second messenger system

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to UCSC and Ensembl, Transcription factor binding sites according to SABiosciences)
About This Section

Genomic View:
UCSC Golden Path with GeneCards custom track

 Transcription factor binding sites upstream to the TACR2 gene  

Entrez Gene cytogenetic band: 10q11-q21   Ensembl cytogenetic band:  10q21.3   HGNC cytogenetic band: 10pter-q23

TACR2 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)

GeneLoc gene densities for chromosome 10         GeneLoc Exon Structure

GeneLoc location for GC10M070834:     (about GC identifiers)

Start:
70,833,665 bp from pter
End:
70,846,680 bp from pter
Size:
13,016 bases
Orientation:
minus strand
RefSeq DNA sequence:
NC_000010.9  NT_008583.16  
(According to 1UniProtKB, and/or Ensembl, Phosphorylation sites according to 2Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Enzo Life Sciences, Abnova, OriGene and/or, Abcam,
Biochemical Assays by Invitrogen, Millipore, R&D Systems, Cell Signaling Technology, and/or Enzo Life Sciences, Ontologies according to Gene Ontology Consortium 01 Apr 2009 and Entrez Gene, Antibodies by Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Cell Signaling Technology, Abcam, Abnova, and/or Novus Biologicals)
About This Section

UniProtKB/Swiss-Prot: NK2R_HUMAN, P21452 (See protein sequence)
Recommended Name: Substance-K receptor  
Size: 398 amino acids; 44442 Da
Subcellular location: Cell membrane; Multi-pass membrane protein
Miscellaneous: The rank order of affinity of this receptor to tachykinins is: substance K >
neuromedin-K > substance P
Secondary accessions: Q8NGQ8 Q9UDE7

REFSEQ proteins: NP_001048.2  

ENSEMBL proteins: 
ENSP00000362403 ENSP00000362404 


Human Recombinant Proteins 
Browse Drug Discovery Central at Invitrogen for human recombinant proteins
Millipore Purified and/or Recombinant TACR2 Protein
Browse Human Recombinant Proteins at Sigma-Aldrich  
Browse R&D Systems for human recombinant proteins
Browse recombinant and purified proteins available from Enzo Life Sciences
Recombinant Proteins from Abcam (Neurokinin A Receptor)
Browse Abnova for Human Recombinant Proteins
                Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 

2 Gene Ontology (GO) cellular component terms (links to tree view):

GO IDQualified GO termEvidencePubMed IDs
GO:0005886 plasma membrane IEA--
GO:0005887 integral to plasma membrane TAS2173708
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Antibodies for TACR2: 
Browse Antibodies Central at Invitrogen
Millipore Mono- and Polyclonal Antibodies for the study of TACR2
Sigma-Aldrich Antibodies for TACR2
Browse R&D Systems for Antibodies
Antibodies from Abcam (Neurokinin A Receptor), each with their AbpromiseSM
Monoclonal and Polyclonal Antibodies from Abnova (TACR2)
Novus Biologicals Antibodies for TACR2

Assays for TACR2: 
Browse Invitrogen for biochemical assays
Browse Kits and Assays available from Millipore
Browse R&D Systems for biochemical assays
Browse biochemical assays available from Enzo Life Sciences

(According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
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4 InterPro domains/families:
 IPR017452 GPCR_Rhodpsn_supfam
 IPR001681 Neurokn_rcpt
 IPR000913 NK2_rcpt
 IPR000276 7TM_GPCR_Rhodpsn


   GeneDecks  TACR2 for the domains selected above  
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Graphical View of Domain Structure for InterPro Entry P21452

ProtoNet protein and cluster: P21452

2 Blocks protein families:
IPB000913 Neurokinin NK2 receptor signature
IPB001681 Neurokinin receptor signature


UniProtKB/Swiss-Prot: NK2R_HUMAN, P21452
Similarity: Belongs to the G-protein coupled receptor 1 family

(According to MGI Jun 06 2009, UniProtKB, IUBMB,and/or Genatlas,
shRNA from OriGene, Sigma-Aldrich, RNAi from Sigma-Aldrich,
RNAi Products, Clones, and Q-PCR Products from Invitrogen, Millipore, OriGene, and/or Abnova, siRNAs from Applied Biosystems, SYBR primers from OriGene, Cell-based Assays from Millipore, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
About This Section

Inhib.
RNA:
Invitrogen RNAi Products for gene knock-down (TACR2)
Browse for Gene Knock-down Tools from Millipore
Abnova Chimera RNAi Products for Gene knock-down (TACR2)
              OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001057

              Applied Biosystems Silencer® siRNAs for TACR2

              Sigma-Aldrich siRNA and siRNA Panels for TACR2  
                     Sigma-Aldrich shRNA Panels and shRNA for TACR2  
                     Explore Sigma-Aldrich super-pooled esiRNAs  

Clones:Browse Clone Ranger at Invitrogen for clones
Millipore Clones for the Expression of TACR2
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_001057
                                 Myc/DDK tagged cDNA clone in CMV expression vector: NM_001057
                                 untagged cDNA clone in CMV expression vector: NM_001057 

Primers: Browse Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers
              OriGene genome-wide validated SYBR primer pairs: NM_001057

UniProtKB/Swiss-Prot: NK2R_HUMAN, P21452
Function: This is a receptor for the tachykinin neuropeptide substance K (neurokinin A). It is
associated with G proteins that activate a phosphatidylinositol-calcium second messenger system

Genatlas biochemistry entry for TACR2:
tachykinin 2 receptor,neurokinin A receptor (substance K), G protein coupled receptor superfamily

3 Gene Ontology (GO) molecular function terms (links to tree view):

GO IDQualified GO termEvidencePubMed IDs
GO:0004872 receptor activity IEA--
GO:0004930 G-protein coupled receptor activity IEA--
GO:0004995 tachykinin receptor activity TAS8307161
About this table

(Pathways according to Invitrogen (maps by GeneGo), Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB,
Sets of similar genes according to GeneDecks, Proteins Network according to SABiosciences, Interactions according to 1UniProtKB, 2MINT, and/or 3STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
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1 Millipore Pathway for TACR2
 Neuropeptides signaling through G-protein alpha-i & G-protein alpha-q

   GeneDecks  TACR2 for the pathways selected above  
About GeneDecksing

2 Kegg Pathways  (Kegg details for TACR2):
 hsa04020 Calcium signaling pathway
 hsa04080 Neuroactive ligand-receptor interaction

   GeneDecks  TACR2 for the pathways selected above  
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 Gene Network CentralTM Interacting Genes and Proteins Network for  TACR2 


5/13 Interacting proteins for TACR2 (ENSP000003624033) via UniProtKB, MINT, and/or STRING (see all 13 )
InteractantInteraction Details
GeneCardExternal ID(s)
TAC1ENSP000003211063STRING (score=.999)
TAC3ENSP000003502363STRING (score=.992)
TAC4ENSP000003340423STRING (score=.964)
B3GAT1ENSP000003078753STRING (score=.911)
CUL1ENSP000003268043STRING (score=.91)
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4 Gene Ontology (GO) biological process terms (links to tree view):

GO IDQualified GO termEvidencePubMed IDs
GO:0006936 muscle contraction TAS2173708
GO:0007165 signal transduction IEA--
GO:0007217 tachykinin receptor signaling pathway TAS8307161
GO:0007588 excretion TAS10862829
About this table
(Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
About This Section

Enzo Life Sciences drugs & compounds for TACR2
Sigma-Aldrich Small Molecules for TACR2:
Antagonist

Compounds for TACR2 available from Tocris Bioscience
CompoundAction CAS number
MDL 29,913Selective NK2 antagonist[135721-56-1]
MEN 10376Potent, selective NK2 antagonist[135306-85-3]
GR 159897Non-peptide, potent NK2 antagonist[158848-32-9]
GR 94800Potent, selective NK2 antagonist[141636-65-9]
[bAla8]-Neurokinin A(4-10)NK2 agonist[122063-01-8]
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10/32 Novoseek chemical compound relationships for TACR2 gene (see all 32 )
Compound   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
senktide 91.88 12 8751080 (2), 9422808 (2), 7544197 (1), 7530573 (1) (see all 10)
cyclo(gln-trp-phe-gly-leu-met) 91.56 4 7544197 (1), 1964226 (1), 8161607 (1), 7705977 (1)
sr48968 91.38 15 12906840 (1), 15191205 (1), 9778489 (1), 10849478 (1) (see all 13)
men 10376 87.13 2 9641542 (1), 16554357 (1)
gr 71251 86.86 1 7688874 (1)
cyclo(met-asp-trp-phe-dap-leu)cyclo(2beta-5beta) 85.57 1 7737306 (1)
septide 85.57 3 7685292 (1), 9422808 (1), 7518302 (1)
fk 224 84.64 8 8665034 (2), 7543746 (1), 7889271 (1), 7531648 (1) (see all 5)
gr 82334 80.85 1 8587664 (1)
fk 888 76.66 5 8529964 (1), 16554357 (1), 7889271 (1)
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(GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 219 Homo sapiens; Jun 2 2009) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView,
non coding RNAs according to RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
RNAi Products from Invitrogen, Millipore, and/or Abnova,
siRNAs from Applied Biosystems, Sigma-Aldrich,
shRNA from Sigma-Aldrich, OriGene,
Tagged/untagged cDNA clones from OriGene,
Expression Assays from Applied Biosystems)
About This Section

Inhib.
RNA:
Invitrogen RNAi Products for gene knock-down (TACR2)
Browse for Gene Knock-down Tools from Millipore
Abnova Chimera RNAi Products for Gene knock-down (TACR2)
              OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001057

              Sigma-Aldrich siRNA and siRNA Panels for TACR2  
                     Sigma-Aldrich shRNA Panels and shRNA for TACR2  
                     Explore Sigma-Aldrich super-pooled esiRNAs  

Applied Biosystems Silencer® siRNAs: 

NM_001057  

REFSEQ mRNAs for TACR2 gene: 

NM_001057.2   

Applied Biosystems TaqMan ® Gene Expression Assays: 

NM_001057  

              OriGene GFP tagged cDNA clone in CMV expression vector: NM_001057
                                 Myc/DDK tagged cDNA clone in CMV expression vector: NM_001057
                                 untagged cDNA clone in CMV expression vector: NM_001057 

Additional cDNA sequence: 

AK096906.1 AK291996.1 AK300649.1 AY322545.1 BC033742.1 BC096842.1 M57414.1 

2 DOTS entries:

DT.100642718  DT.75101841 

24/32 AceView cDNA sequences (see all 32 ):

AY322545 AW080614 BF064138 AI971217 BQ020625 AW137396 BX483277 AI494107 
BX483562 CF147817 BM906753 BX483631 AW134918 BC033742 AI421049 CD610397 
M57414 BX280340 AW135753 BI765515 BE790440 NM_001057 BX483630 AI224121 

highest scoring ESTs for TACR2:

AY322545 BC033742 BI765515 BM906753 BX483277 BX483562 BX483630 CF147817 M57414 BC096842 

Unigene Cluster for TACR2:

Tachykinin receptor 2
Hs.88372  [show with all ESTs]
Unigene Representative Sequence: NM_001057


GeneLoc Exon Structure

2 Ensembl transcripts including schematic representations:
ENST00000373306  ENST00000373307  
(Experimental results according to 1GeneNote and GNF BioGPS,
probe sets-to-genes annotations according to 2GeneAnnot , 3GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 219 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
Expression Assays from Applied Biosystems )
About This Section

TACR2 expression in normal and diseased human tissues

 Applied Biosystems TaqMan ® Gene Expression Assays for TACR2

1 / 2 / 3

3 probe-sets matching TACR2 gene


Affymetrix
probe-set
Array  GeneAnnot data GeneNote data GeneTide data
# genes Sensitivity Specificity Correlation Length Gb_Accession Consensus Uniqueness Score Rank

35404_at2, 3 U95-A 1 1.00 1.00 1.00 1.00 M60284 0.20 1.00 0.72 1

214348_at2, 3 U133-A 1 1.00 1.00 -- -- NM_001057 0.60 1.00 0.82 1

214348_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --
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Data from (Publications) and GNF BioGPS
    About these images
About these images

CGAP SAGE TAG: GGGCCAGAAC

SOURCE GeneReport for Unigene cluster: Hs.88372

Expression variation in blood from EXPOLDB for TACR2

(Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD and/or 5MGI Jun 06 2009, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
About This Section


Orthologs for TACR2 gene from 5/9 species (see all 9 )
Organism Gene Locus Description Human
Similarity
NCBI accessions
dog
(Canis familiaris)
Tacr21   -- tachykinin receptor 2 87.6(n)
87.07(a)
489020  NM_001012617.1  NP_001012635.1 
chimpanzee
(Pan troglodytes)
TACR21   -- tachykinin receptor 2 98.83(n)
98.24(a)
450506  XM_507831.2  XP_507831.2 
cow
(Bos taurus)
TACR21   -- tachykinin receptor 2 88.74(n)
88.92(a)
282088  NM_174469.2  NP_776894.1 
mouse
(Mus musculus)
Tacr21, 5 105
tachykinin receptor 21, 5 85.05(n)1
85.75(a)1
213371  NM_009314.31  NP_033340.21 
 AF3997055  AK0334435  (see all 8)
chicken
(Gallus gallus)
TACR21   -- tachykinin receptor 2 67.82(n)
65.13(a)
768996  XM_001232176.1  XP_001232177.1 
About this table        Species with no ortholog for TACR2

ENSEMBL Gene Tree for TACR2
(Paralogs according to 1HomoloGene
and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
About This Section

Paralogs for TACR2 gene
TACR32  TACR12  

(According to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Genotyping Reagents from Applied Biosystems)
About This Section


10/170 NCBI SNPs in TACR2 are shown (see all 170 )
(Click for Applied Biosystems TaqMan ® Genotyping Assay)  (see all 81)
ABGenomic DataTranscription DataAllele Frequencies
SNP IDValidChr 10 posSequenceRecsAA
Chg
TypeMoreRecsAllele
freq
PopTotal
sample
More
------------
rs50309281,2
A,C,F,H70846643(-) GCAGCT/CGGCAG 1 -- ut51 tfbs34Minor allele frequency- C:0.25EU EA WA 400
rs50309201,2
A,C,F,H70846018(-) GGGCAT/CCACAG 1 T/I mis1 ese313Minor allele frequency- C:0.21EU EA WA NA 1330
rs50309211,2
A,C,F,H70847261(-) TTCCCG/AGAAGA 1 -- ng31 tfbs38Minor allele frequency- A:0.08EU EA WA 840
rs79068631,2
A,C,F,H70846341(+) ATCATG/ATGGAA 1 -- ut51 ese38Minor allele frequency- A:0.11EU EA WA 836
rs37637371,2
C,F,H70848221(+) GGCAGT/CGGGAA 1 -- ng318Minor allele frequency- C:0.24EA NA EU WA 1466
rs107622951,2
A,F,H70846724(+) TGCTCA/GCGAGG 1 -- ng314Minor allele frequency- G:0.20EU EA WA 420
rs115953481,2
C,F,H70846926(+) GAGTTC/GGAGCC 1 -- ng318Minor allele frequency- G:0.06EU EA WA 828
rs122447231,2
C,F,H70833733(+) CCCATT/CATCAT 1 -- ng51 ese34Minor allele frequency- C:0.09EU EA WA 392
rs37938531,2
C,F70846635(+) TCAGGG/ACTCTG 1 -- ut511Minor allele frequency- A:0.15EA 1480
rs109987661,2
F,H70846689(+) GCAGGG/ACCAGT 1 -- ng314Minor allele frequency- A:0.07EU EA WA 418
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HapMap Linkage Disequilibrium images for TACR2 (up to first 250kb)

(in which this Gene is Involved, According to OMIM, UniProtKB, Novoseek, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, HGMD, GAD, HuGE Navigator, BCGD, and/or TGDB.)
About This Section

OMIM: 162321

10/14 Novoseek disease relationships for TACR2 gene (see all 14 )

Disease   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
asthma 41.95 10 9875470 (1), 9223001 (1), 8627566 (1), 15992015 (1) (see all 7)
airways disease 25.49 1 7891319 (1)
inflammation 21.02 8 15037522 (2), 11712745 (2), 8529964 (1), 8552786 (1) (see all 6)
erythroleukemia 7.57 2 8302285 (2)
hyperalgesia 6.54 1 15037522 (1)
tumors 0.45 3 11384204 (1), 16222150 (1), 19111017 (1)
necrosis 0.00 2 11384204 (1), 19111017 (1)
pulmonary disease chronic obstructive 0.00 1 11712745 (1)
lung diseases 0.00 1 1281723 (1)
allergic reaction 0.00 1 8821532 (1)
About this table

Human Genome Epidemiology Navigator: TACR2 (6 documents)

(Possibly Related Articles in Doctor's Guide)
About This Section

  --

(in PubMed. Associations of this gene to articles via 1Novoseek, 2HGNC, 3Entrez Gene, 4UniProtKB/Swiss-Prot, 5UniProtKB/TrEMBL, 6GAD, and/or 7PharmGKB)
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10/285 PubMed articles for TACR2 gene (see all 285 ):
(in PubMed, OMIM, and NCBI Bookshelf)
About This Section

 ANDOR
Aliases
Free Text  

  Query String
PubMed
OMIM
NCBI Bookshelf
  (Note: In FireFox, select the above section and copy using Ctrl-C)
(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, and/or H-InvDB)
About This Section

Entrez Gene: 6865 HGNC: 11527 AceView: TACR2 Ensembl:ENSG00000075073 euGenes: HUgn6865
ECgene: TACR2 H-InvDB: TACR2
(According to HUGE)
About This Section

  --
(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section

  --
(Available from WIS Yeda, Salk, Tufts)
About This Section

  --
(Reagents available from Applied Biosystems, Antibodies and assays by Cell Signaling Technology, Abcam, Novus Biologicals,
Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
Enzo Life Sciences, and/or Tocris Bioscience)
About This Section



Products for TACR2:
 TaqMan ® Gene Expression Assays
 TaqMan ® Genotyping Assays
  Free SNP selection tool



  Invitrogen iPath Pathways  Invitrogen BLOCK-iT™ RNAi
  Invitrogen Antibodies  Invitrogen Assays
  Invitrogen Clones  Invitrogen Q-PCR Products
  Invitrogen Human Recombinant Kinases  Invitrogen Custom Antibody and Peptide Service
  Invitrogen Proteins / Assays / Screening Services  Search Invitrogen catalog for TACR2-related products

 Millipore Custom Antibody & Bulk Services
 Millipore Preclinical / Clinical Development Services
 Millipore Immunoassay Services
 Millipore Target Screening & Profiling Services


 Predesigned and custom siRNAs for TACR2 Antibodies for TACR2
 Explore super-pooled esiRNAs Browse proteins at Sigma-Aldrich
 Lentivirus-delivered shRNAs for TACR2 Small molecules for TACR2
 "Your Favorite Gene" Pathwaysfeedback


  
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 Recombinant Proteins
(Neurokinin A Receptor)
 Antibodies (Neurokinin A Receptor)
 Search OriGene for TACR2
 Tocris compounds for TACR2




 Drugs for TACR2
 Search www.enzolifesicences.com for proteins, assays, substrates, inhibitors & antibodies
 Antibodies for TACR2

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