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Aliases & Descriptions for TACR2
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| NK-2R 3 | | NK2R 1, 2, 3 | | NKNAR 2, 3, 5 | | OTTHUMP00000019722 2 | | SKR 1, 2, 3 | | TAC2R 2, 3, 5 |
| | | Descriptions |
|---|
| NK-2 receptor 2, 3 | | Neurokinin A receptor 2, 3 | | neurokinin 2 receptor 2 | | seven transmembrane helix receptor 2 | | substance K receptor 2 | | tachykinin receptor 2 2, 3 |
|
| | Search outside databases for aliases for TACR2 genePrevious GC identifers: GC10M069975 GC10M070250 GC10M071056 GC10M070509 |
Summaries for TACR2(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for TACR2: This gene belongs to a family of genes that function as receptors for tachykinins. Receptor affinities are specified by variations in the 5'-end of the sequence. The receptors belonging to this family are characterized by interactions with G proteins and 7 hydrophobic transmembrane regions. This gene encodes the receptor for the tachykinin neuropeptide substance K, also referred to as neurokinin A. [provided by RefSeq] UniProtKB/Swiss-Prot: NK2R_HUMAN, P21452Function: This is a receptor for the tachykinin neuropeptide substance K (neurokinin A). It is associated with G proteins that activate a phosphatidylinositol-calcium second messenger system |
Genomic Location for TACR2
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the TACR2 gene 
Entrez Gene cytogenetic band: 10q11-q21 Ensembl cytogenetic band: 10q21.3 HGNC cytogenetic band: 10pter-q23TACR2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 10 GeneLoc Exon Structure GeneLoc location for GC10M070834:
(about GC identifiers)
Start:
|
70,833,665 bp from pter |
End:
|
70,846,680 bp from pter |
Size:
|
13,016 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000010.9 NT_008583.16
| Proteins for TACR2
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: NK2R_HUMAN, P21452 (See
protein sequence)Recommended Name: Substance-K receptor Size: 398 amino acids; 44442 Da
Subcellular location: Cell membrane; Multi-pass membrane protein
Miscellaneous: The rank order of affinity of this receptor to tachykinins is: substance K > neuromedin-K > substance P
Secondary accessions: Q8NGQ8 Q9UDE7REFSEQ proteins: NP_001048.2
ENSEMBL proteins: ENSP00000362403 ENSP00000362404
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
2 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for TACR2: Assays for TACR2: | Protein
Domains/ Families for TACR2(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P21452
ProtoNet protein and cluster: P21452 2 Blocks protein families: IPB000913 Neurokinin NK2 receptor signature IPB001681 Neurokinin receptor signature
UniProtKB/Swiss-Prot: NK2R_HUMAN, P21452Similarity: Belongs to the G-protein coupled receptor 1 family | Gene Function for TACR2
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001057
Applied Biosystems Silencer® siRNAs for TACR2
Sigma-Aldrich siRNA and siRNA Panels for TACR2  Sigma-Aldrich shRNA Panels and shRNA for TACR2  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_001057                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001057                                  untagged cDNA clone in CMV expression vector: NM_001057 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001057
UniProtKB/Swiss-Prot: NK2R_HUMAN, P21452Function: This is a receptor for the tachykinin neuropeptide substance K (neurokinin A). It is associated with G proteins that activate a phosphatidylinositol-calcium second messenger systemGenatlas biochemistry entry for TACR2:tachykinin 2 receptor,neurokinin A receptor (substance K), G protein coupled receptor superfamily3 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for TACR2
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
Gene Network CentralTM Interacting Genes and Proteins Network for TACR2 
5/13 Interacting proteins for TACR2 (ENSP000003624033) via UniProtKB, MINT, and/or STRING (see all 13
)About this table
4 Gene Ontology (GO) biological process terms (links to tree view): About this table
|
Drugs & Compounds for TACR2(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|  |
Enzo Life Sciences drugs & compounds for TACR2 |
 | Sigma-Aldrich Small Molecules for TACR2: Antagonist |
Compounds for TACR2 available from Tocris Bioscience About this table
10/32 Novoseek chemical compound relationships for TACR2 gene (see all 32
)
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| senktide |
91.88 |
12 |
8751080 (2), 9422808 (2), 7544197 (1), 7530573 (1) (see all 10) |
| cyclo(gln-trp-phe-gly-leu-met) |
91.56 |
4 |
7544197 (1), 1964226 (1), 8161607 (1), 7705977 (1) |
| sr48968 |
91.38 |
15 |
12906840 (1), 15191205 (1), 9778489 (1), 10849478 (1) (see all 13) |
| men 10376 |
87.13 |
2 |
9641542 (1), 16554357 (1) |
| gr 71251 |
86.86 |
1 |
7688874 (1) |
| cyclo(met-asp-trp-phe-dap-leu)cyclo(2beta-5beta) |
85.57 |
1 |
7737306 (1) |
| septide |
85.57 |
3 |
7685292 (1), 9422808 (1), 7518302 (1) |
| fk 224 |
84.64 |
8 |
8665034 (2), 7543746 (1), 7889271 (1), 7531648 (1) (see all 5) |
| gr 82334 |
80.85 |
1 |
8587664 (1) |
| fk 888 |
76.66 |
5 |
8529964 (1), 16554357 (1), 7889271 (1) |
About this table
|
Transcripts for TACR2(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001057
Sigma-Aldrich siRNA and siRNA Panels for TACR2  Sigma-Aldrich shRNA Panels and shRNA for TACR2  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_001057 REFSEQ mRNAs for TACR2 gene: NM_001057.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001057               OriGene GFP tagged cDNA clone in CMV expression vector: NM_001057                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001057                                  untagged cDNA clone in CMV expression vector: NM_001057  Additional cDNA sequence: AK096906.1 AK291996.1 AK300649.1 AY322545.1 BC033742.1 BC096842.1 M57414.1 2 DOTS entries: DT.100642718 DT.75101841 24/32 AceView cDNA sequences (see all 32
):AY322545 AW080614 BF064138 AI971217 BQ020625 AW137396 BX483277 AI494107 BX483562 CF147817 BM906753 BX483631 AW134918 BC033742 AI421049 CD610397 M57414 BX280340 AW135753 BI765515 BE790440 NM_001057 BX483630 AI224121
highest scoring ESTs for TACR2:AY322545 BC033742 BI765515 BM906753 BX483277 BX483562 BX483630 CF147817 M57414 BC096842 Unigene Cluster for TACR2: Tachykinin receptor 2 Hs.88372 [show with all ESTs]Unigene Representative Sequence: NM_001057
GeneLoc Exon Structure
2 Ensembl transcripts including schematic representations: ENST00000373306
ENST00000373307
|
Expression for TACR2
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| TACR2 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for TACR2
1 / 2 / 3 3 probe-sets matching TACR2 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: GGGCCAGAAC
SOURCE GeneReport for Unigene cluster: Hs.88372
Expression variation in blood from EXPOLDB for TACR2 |
Orthologs for TACR2
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for TACR2 gene from 5/9 species (see all 9
)
About this table Species with no ortholog for TACR2
ENSEMBL Gene Tree for TACR2 | Paralogs for TACR2(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for TACR2 gene
- TACR32 TACR12
|
SNPs/Variants for TACR2(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for TACR2 (up to first 250kb)
|
Disorders & Mutations for TACR2
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 162321
10/14 Novoseek disease relationships for TACR2 gene (see all 14
)
About this table
Human Genome Epidemiology Navigator: TACR2 (6 documents)
|
Medical News for TACR2(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for TACR2 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/285 PubMed articles for TACR2 gene (see all 285
):- Cloning and expression of the human substance K receptor and analysis of its role in mitogenesis. (PubMed id 1848773)1, 3, 4 Kris R.M.... Schlessinger J. (1991)
- The human neurokinin A (substance K) receptor. Molecular cloning of the gene, chromosome localization, and isolation of cDNA from tracheal and gastric tissues. (PubMed id 2173708)1, 3, 4 Gerard N.P.... Gerard C. (1990)
- The human neurokinin A (substance K) receptor. Molecular cloning of the gene, chromosome localization, and isolation of the cDNA from tracheal and gastric tissues. (PubMed id 1845990)1, 3, 4 Gerard N.P....Gerard C. (1991)
- Isolation and characterisation of the human lung NK-2 receptor gene using rapid amplification of cDNA ends. (PubMed id 1710456)3, 4 Graham A.... Briggs I. (1991)
- Molecular cloning of the human neurokinin-2 receptor cDNA by polymerase chain reaction and isolation of the gene. (PubMed id 1659296)3, 4 Gerard N.P. and Gerard C. (1991)
- Qualitative and quantitative analysis of tachykinin NK2 receptors in chemically defined human colonic neuronal pathways. (PubMed id 18219665)1, 3 Jaafari N....Jule Y. (2008)
- The ligand binding site of the neurokinin 2 receptor. Site-directed mutagenesis and identification of neurokinin A binding residues in the human neurokinin 2 receptor. (PubMed id 7961636)1, 3 Bhogal N....Findlay J.B. (1994)
- Association of genetic variations in neurokinin-2 receptor with enhanced cough sensitivity to capsaicin in chronic cough. (PubMed id 16893949)1, 3 Park H.K....Kim Y.Y. (2006)
- Tachykinin antagonists inhibit nerve-mediated contractions in the circular muscle of the human ileum. Involvement of neurokinin-2 receptors. (PubMed id 1370160)1, 3 Maggi C.A....Giachetti A. (1992)
- Distribution pattern of tachykinin NK2 receptors in human colon: involvement in the regulation of intestinal motility. (PubMed id 17503489)1, 3 Jaafari N....Jule Y. (2007)
|
Search for TACR2
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing TACR2
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing TACR2
(According to HUGE)
About This Section
| -- |
Specialized Databases showing TACR2(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for TACR2(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for TACR2:

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|
 |  |  |
| | | | Tocris compounds for TACR2 |
|
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Incremental update: 13 Oct 2009
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