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Aliases & Descriptions for TACC2
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases AZU-1 1 , 2 , 3 ECTACC 2 OTTHUMP00000020645 2 OTTHUMP00000035135 2
Descriptions Anti Zuai-1 2 , 3 transforming, acidic coiled-coil containing protein 2 2
Search outside databases for aliases for TACC2 genePrevious GC identifers: GC10P122942 GC10P123166 GC10P123879 GC10P123446 GC10P123474
Summaries for TACC2 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for TACC2 : Transforming acidic coiled-coil proteins are a conserved family of centrosome- andmicrotubule-interacting proteins that are implicated in cancer. This gene encodes a protein thatconcentrates at centrosomes throughout the cell cycle. This gene lies within a chromosomal regionassociated with tumorigenesis. Expression of this gene is induced by erythropoietin and is thoughtto affect the progression of breast tumors. Several transcript variants encoding differentisoforms have been found for this gene. [provided by RefSeq] UniProtKB/Swiss-Prot: TACC2_HUMAN, O95359 Function : Plays a role in the microtubule-dependent coupling of the nucleus and the centrosome.Involved in the processes that regulate centrosome-mediated interkinetic nuclear migration (INM)of neural progenitors (By similarity). May play a role in organizing centrosomal microtubules. Mayact as a tumor suppressor protein. May represent a tumor progression marker
Gene Wiki entry for TACC2
Genomic Location for TACC2
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the TACC2 gene Entrez Gene cytogenetic band: 10q26 Ensembl cytogenetic band: 10q26.13 HGNC cytogenetic band: 10q26 TACC2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 10 GeneLoc Exon Structure
GeneLoc location for GC10P123738:
(about GC identifiers )
Start:
123,738,679 bp from pter
End:
124,004,049 bp from pter
Size:
265,371 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000010.9 NT_030059.12 Proteins for TACC2
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: TACC2_HUMAN, O95359 (See
protein sequence )Recommended Name: Transforming acidic coiled-coil-containing protein 2 Size : 2948 amino acids; 309427 Da
Subunit : Interacts with CCDC100/CEP120 (By similarity). Interacts with microtubules. Interacts withYEATS4, GCN5L2 and PCAF
Subcellular location : Cytoplasm. Nucleus. Centrosome
Developmental stage : Expressed in fetal brain, lung, liver and kidney
Secondary accessions : Q4VXL0 Q4VXL3 Q4VXL6 Q4VXL7 Q5U5T7 Q86WG6 Q86WG7 Q8TCK9 Q9BVQ1 Q9NZ41 Q9NZR5Alternative splicing : 6 isoforms : O95359-4 O95359-1 O95359-2 O95359-3 O95359-5 O95359-6 (Experimental confirmation may be lacking for some isoforms)
Post-translational modifications:
Phosphorylated by TTK; which is required for localization in centrosome1
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (4 alternative transcripts):
NP_008928.1 NP_996742.1 NP_996743.1 NP_996744.2 ENSEMBL proteins: ENSP00000334280 ENSP00000350701 ENSP00000358001 ENSP00000358000 ENSP00000343715 ENSP00000260733 ENSP00000353763 ENSP00000357995 ENSP00000357993 ENSP00000357997 ENSP00000357996 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 3 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for TACC2: Assays for TACC2:
Protein
Domains/ Families for TACC2(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry O95359 ProtoNet protein and cluster: O95359
1 Blocks protein family : IPB007707 Transforming acidic coiled-coil-containing UniProtKB/Swiss-Prot: TACC2_HUMAN, O95359 Similarity : Belongs to the TACC familySimilarity : Contains 1 SPAZ (Ser/Pro-rich AZU-1) domain
Gene Function for TACC2
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
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Millipore ,
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Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 4 ): NM_006997 Applied Biosystems Silencer ® siRNAs for TACC2 Sigma-Aldrich siRNA and siRNA Panels for TACC2 Sigma-Aldrich shRNA for TACC2 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 4 ): NM_006997                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 4 ): NM_006997                                  untagged cDNA clones in CMV expression vector (see all 5 ): NM_006997  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_206862 UniProtKB/Swiss-Prot: TACC2_HUMAN, O95359 Function : Plays a role in the microtubule-dependent coupling of the nucleus and the centrosome.Involved in the processes that regulate centrosome-mediated interkinetic nuclear migration (INM)of neural progenitors (By similarity). May play a role in organizing centrosomal microtubules. Mayact as a tumor suppressor protein. May represent a tumor progression marker
2 MGI mutant phenotypes (inferred from 1 allele ) (MGI details for Tacc2) :2 Gene Ontology (GO) molecular function terms (links to tree view) :
About this table
Pathways & Interactions for TACC2
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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Gene Network CentralTM Interacting Genes and Proteins Network for TACC2 5 Interacting proteins for TACC2 (ENSP00000358001 3 O95359 2 ) via UniProtKB, MINT, and/or STRING About this table
Drugs & Compounds for TACC2 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
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Novoseek and Drugs according to
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PharmGKB )
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Transcripts for TACC2(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 4 ): NM_006997 Sigma-Aldrich siRNA and siRNA Panels for TACC2 Sigma-Aldrich shRNA for TACC2 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_006997 NM_206860 NM_206861 NM_206862
REFSEQ mRNAs for TACC2 gene (4 alternative transcripts): NM_006997.2 NM_206860.1 NM_206861.1 NM_206862.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_006997 NM_206860 NM_206861 NM_206862
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 4 ): NM_006997                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 4 ): NM_006997                                  untagged cDNA clones in CMV expression vector (see all 5 ): NM_006997  
Additional cDNA sequence: BC029124.1 XM_001726456.1
24/29 DOTS entries (see all 29
): DT.92436580 DT.91785837 DT.100821624 DT.102835591 DT.100821621 DT.97787283 DT.117550 DT.91665866 DT.121239147 DT.121239228 DT.95188118 DT.100741568 DT.121239237 DT.92032483 DT.100000873 DT.91661197 DT.95115888 DT.95319329 DT.101975725 DT.121239160 DT.97843751 DT.97859639 DT.121239208 DT.121239270
24/277 AceView cDNA sequences (see all 277
):BC000999 CB216286 AI564711 CA417838 AW295050 AI299389 AK056743 Z44440 BX282179 AF095791 AI801508 H90662 CA447782 H91589 CF528324 BQ631276 NM_206862 AI214322 AL713712 AA935720 AA132922 AI698058 Z42121 BM672642
highest scoring ESTs for TACC2 :AF095791 AA176435 AA176449 AA506062 AA534776 AA593098 AA632939 AA635668 AA678366 AA704275
Unigene Clusters for TACC2: Transforming, acidic coiled-coil containing protein 2 Hs.501252 [show with all ESTs ] , Hs.713875 [show with all ESTs ] Unigene Representative Sequences: AF528099 , BC029124 GeneLoc Exon Structure 5/18 Alternative Splicing Database (ASD) splice patterns (SP) for TACC2 (see all 18
) ExUns: 1 ^ 2 ^ 3a · 3b ^ 4 ^ 5 ^ 6a · 6b · 6c · 6d ^ 7 ^ 8 ^ 9 ^ 10a · 10b ^ 11 ^ 12a · 12b ^ 13 ^ 14a · 14b · 14c · 14d · 14e · 14f · 14g ^ SP1 :           -   -   -   -   -   -       -   -   -       -   -               SP2 :     -   -   -   -   -   -   -   -   -     -   -   -   -       -   -               SP3 :                               -       -   -               SP4 :                         -   -   -   -       -   -               SP5 :                               -       -   -              
ExUns: 15 ^ 16 ^ 17 ^ 18a · 18b ^ 19a · 19b ^ 20 ^ 21 ^ 22 ^ 23 ^ 24 ^ 25 ^ 26 ^ 27a · 27b ^ 28a · 28b ^ 29a · 29b ^ 30 ^ 31a · 31b SP1 :     -                         -     -               SP2 :     -                         -     -               SP3 :     -                         -     -               SP4 :     -   -               -   -       -     -               SP5 :     -                   -       -     -              
About this scheme ECgene alternative splicing isoforms for TACC2 11 Ensembl transcripts including schematic representations : ENST00000334433
ENST00000358010
ENST00000369005
ENST00000369004
ENST00000340076
ENST00000260733
ENST00000360561
ENST00000368999
ENST00000368997
ENST00000369001
ENST00000369000
Expression for TACC2
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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TACC2 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for TACC2 1 / 2 / 3
7 probe-sets matching TACC2 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: CTGTACATTCSOURCE GeneReport for Unigene clusters: Hs.501252 Hs.713875 Expression variation in blood from EXPOLDB for TACC2
UniProtKB/Swiss-Prot: TACC2_HUMAN, O95359 Tissue specificity : Strongly expressed in heart, skeletal muscle, brain, prostate, thyroid andtrachea
Orthologs for TACC2
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for TACC2 gene from 5/8 species (see all 8
)
About this table Species with no ortholog for TACC2 ENSEMBL Gene Tree for TACC2 Paralogs for TACC2 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for TACC2 gene TACC3 2 TACC1 2
SNPs/Variants for TACC2 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for TACC2 (up to first 250kb)
Disorders & Mutations for TACC2
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 605302 3 Novoseek disease relationships for TACC2 gene
About this table Human Genome Epidemiology Navigator: TACC2 (1 document)
Medical News for TACC2 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for TACC2 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/24 PubMed articles for TACC2 gene (see all 24
): The transforming acidic coiled coil proteins interact with nuclear histone acetyltransferases. (PubMed id 14767476) 2, 3, 4 Gangisetty O.... Still I.H. (2004) TTK kinase is essential for the centrosomal localization of TACC2. (PubMed id 15304323) 1, 3, 4 Dou Z.... Yao X. (2004) A probability-based approach for high-throughput protein phosphorylation analysis and site localization. (PubMed id 16964243) 3, 4 Beausoleil S.A.... Gygi S.P. (2006) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 3, 4 Gerhard D.S....Malek J. (2004) The DNA sequence and comparative analysis of human chromosome 10. (PubMed id 15164054) 3, 4 Deloukas P.... Rogers J. (2004) Molecular cloning, genomic structure and interactions of the putative breast tumor suppressor TACC2. (PubMed id 12620397) 3, 4 Lauffart B.... Still I.H. (2003) Cloning and structural characterization of ECTACC, a new member of the transforming acidic coiled coil (TACC) gene family: cDNA sequence and expression analysis in human microvascular endothelial cells. (PubMed id 11161455) 3, 4 Pu J.J.... Banerjee D. (2001) AZU-1: a candidate breast tumor suppressor and biomarker for tumor progression. (PubMed id 10749935) 3, 4 Chen H.-M....Bissell M.J. (2000) The TACC domain identifies a family of centrosomal proteins that can interact with microtubules. (PubMed id 11121038) 3, 4 Gergely F....Raff J.W. (2000) TACC3 expression is tightly regulated during early differentiation. (PubMed id 12711550) 1, 3 Sadek C.M....Gustafsson J.A. (2003)
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Genome Databases showing TACC2
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing TACC2
(According to HUGE )
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Specialized Databases showing TACC2 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for TACC2 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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