Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

TACC2 Gene

protein-coding   GIFtS: 56
GCID: GC10P123738

transforming, acidic coiled-coil containing protein 2

 Explore 9 diseases affiliated with
TACC2 via our new
 Human Malady Compendium 
Biological research products
for TACC2
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Transforming, Acidic Coiled-Coil Containing Protein 21 2     Anti-Zuai-13
AZU-11 2 3     EC 2.4.2.108
ECTACC2     EC 4.3.2.18
Anti Zuai-12     EC 6.3.5.28
Transforming Acidic Coiled-Coil-Containing Protein 22     

External Ids:    HGNC: 115231   Entrez Gene: 105792   Ensembl: ENSG000001381627   OMIM: 6053025   UniProtKB: O953593   

Export aliases for TACC2 gene to outside databases

Previous GC identifers: GC10P122942 GC10P123166 GC10P123879 GC10P123446 GC10P123474 GC10P117379


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for TACC2:
Transforming acidic coiled-coil proteins are a conserved family of centrosome- and microtubule-interacting proteins
that are implicated in cancer. This gene encodes a protein that concentrates at centrosomes throughout the cell cycle.
This gene lies within a chromosomal region associated with tumorigenesis. Expression of this gene is induced by
erythropoietin and is thought to affect the progression of breast tumors. Several transcript variants encoding
different isoforms have been found for this gene. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: TACC2_HUMAN, O95359
Function: Plays a role in the microtubule-dependent coupling of the nucleus and the centrosome. Involved in the
processes that regulate centrosome-mediated interkinetic nuclear migration (INM) of neural progenitors (By
similarity). May play a role in organizing centrosomal microtubules. May act as a tumor suppressor protein. May
represent a tumor progression marker

Gene Wiki entry for TACC2


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000010.10  NC_018921.1  NT_030059.13  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the TACC2 gene promoter:
         E2F-3a   E2F-4   E2F-5   Pax-6   FOXD1   AP-4   E2F-2   PPAR-alpha   E2F-1   E2F   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 3): TACC2 promoter sequence
   Search SABiosciences Chromatin IP Primers for TACC2

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat TACC2


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 10q26   Ensembl cytogenetic band:  10q26.13   HGNC cytogenetic band: 10q26

TACC2 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
TACC2 gene location

GeneLoc information about chromosome 10         GeneLoc Exon Structure

GeneLoc location for GC10P123738:  view genomic region     (about GC identifiers)

Start:
123,748,689 bp from pter      End:
124,014,060 bp from pter
Size:
265,372 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: TACC2_HUMAN, O95359 (See protein sequence)
Recommended Name: Transforming acidic coiled-coil-containing protein 2  
Size: 2948 amino acids; 309427 Da
Subunit: Interacts with CCDC100/CEP120 (By similarity). Interacts with microtubules. Interacts with YEATS4, GCN5L2 and
PCAF
Subcellular location: Cytoplasm. Nucleus. Cytoplasm, cytoskeleton, centrosome
Developmental stage: Expressed in fetal brain, lung, liver and kidney
Sequence caution: Sequence=AAF29537.2; Type=Miscellaneous discrepancy; Note=Intron retention; Sequence=AAF63433.1;
Type=Erroneous initiation;
Secondary accessions: Q4VXL0 Q4VXL3 Q4VXL6 Q4VXL7 Q5U5T7 Q86WG6 Q86WG7 Q8TCK9 Q9BVQ1 Q9NZ41 Q9NZR5
Alternative splicing: 6 isoforms:  O95359-4   O95359-1   O95359-2   O95359-3   O95359-5   O95359-6   (Contains a phosphothreonine at position 2625)

Explore the universe of human proteins at neXtProt for TACC2: NX_O95359

Post-translational modifications:

  • Phosphorylated by TTK; which is required for localization in centrosome1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_O95359

  • 3 DME Specific Peptides for TACC2 (O95359)
     ASTPSCP  DAYSTGSS  LASGLPSP 

    TACC2 Protein expression data from MOPED and PaxDb:    About this image 
    TACC2 Protein Expression
    REFSEQ proteins (4 alternative transcripts): 
    NP_008928.1  NP_996742.1  NP_996743.1  NP_996744.2  

    ENSEMBL proteins: 
     ENSP00000358001   ENSP00000425062   ENSP00000424467   ENSP00000427618   ENSP00000423069  
     ENSP00000357997   ENSP00000357996   ENSP00000353763   ENSP00000357995   ENSP00000422815  
     ENSP00000260733   ENSP00000420967   ENSP00000421702   ENSP00000426303   ENSP00000422725  
     ENSP00000425525   ENSP00000423764   ENSP00000334280   ENSP00000350701   ENSP00000395048  

    Human Recombinant Protein Products for TACC2: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
    Browse OriGene Protein Over-expression Lysates
    OriGene Custom Protein Services for TACC2 
    GenScript Custom Purified and Recombinant Proteins Services for TACC2
    Novus Biologicals TACC2 Lysate
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for TACC2

    Gene Ontology (GO): 4 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005730nucleolus IDA--
    GO:0005737cytoplasm IDA--
    GO:0005794Golgi apparatus IDA--
    GO:0005815microtubule organizing center IEA--

    TACC2 for ontologies           About GeneDecksing



    TACC2 Antibody Products: 
    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Browse R&D Systems for Antibodies
    OriGene Antibodies: TACC2
    OriGene Custom Antibody Services for TACC2 
    GenScript Custom Superior Antibodies Services for TACC2
    Novus Biologicals TACC2 Antibodies
    Abcam antibodies for TACC2 
    Uscn Antibodies for TACC2
    ThermoFisher Antibodies for TACC2

    Assay Products for TACC2: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for TACC2
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for TACC2


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    TACC2 for domains           About GeneDecksing

    1 InterPro domain/family:
     IPR007707 TACC

    Graphical View of Domain Structure for InterPro Entry O95359

    ProtoNet protein and cluster: O95359

    1 Blocks protein family: IPB007707 Transforming acidic coiled-coil-containing

    UniProtKB/Swiss-Prot: TACC2_HUMAN, O95359
    Similarity: Belongs to the TACC family
    Similarity: Contains 1 SPAZ (Ser/Pro-rich AZU-1) domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: TACC2_HUMAN, O95359
    Function: Plays a role in the microtubule-dependent coupling of the nucleus and the centrosome. Involved in the
    processes that regulate centrosome-mediated interkinetic nuclear migration (INM) of neural progenitors (By
    similarity). May play a role in organizing centrosomal microtubules. May act as a tumor suppressor protein. May
    represent a tumor progression marker

         Enzyme Numbers (IUBMB): EC 4.3.2.12 EC 2.4.2.102 EC 6.3.5.22

         Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0019904protein domain specific binding IEA--
    GO:0035257nuclear hormone receptor binding IDA15207008
         
    TACC2 for ontologies           About GeneDecksing


    Phenotypes:
         2 GenomeRNAi human phenotypes for TACC2:
     Decreased G3BP1 protein expres  Increased HPV18 LCR reporter a 

         2 MGI mutant phenotypes (inferred from 1 allele(MGI details for Tacc2):
     normal  tumorigenesis 

    TACC2 for phenotypes           About GeneDecksing

    Animal Models:
         Mouse knock-out Tacc2tm1Jni for TACC2
       inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for TACC2 

    miRNA
    Products:
        
    OriGene 3'-UTR Clone (see all 4): TACC2
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat TACC2
    8/28 QIAGEN miScript miRNA Assays for microRNAs that regulate TACC2 (see all 28):
    hsa-miR-3910 hsa-miR-217 hsa-miR-125a-5p hsa-miR-199b-3p hsa-miR-199a-3p hsa-miR-1278 hsa-miR-3129-5p hsa-miR-25
    SwitchGear 3'UTR luciferase reporter plasmidTACC2 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for TACC2 (see all 7)
    OriGene shRNA RFP: TACC2
    OriGene siRNA: TACC2
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat TACC2
    Sirion Biotech Custom design and validation of potent shRNA sequences against TACC2 

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for TACC2
     
    Sirion Biotech Customized adenovirus for potent knockdown of TACC2

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for TACC2 (see all 9)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for TACC2 (see all 4)
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector (see all 4): TACC2 (NM_006997)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for TACC2
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat TACC2 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for TACC2
    Search LifeMap BioReagents cell lines for TACC2
    Sirion Biotech Customized stable knockdown cell line services for TACC2 
    Sirion Biotech Customized inducible knockdown cell line services for TACC2

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for TACC2


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section



    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for TACC2

    STRING Interaction Network Preview (showing 5 interactants - click image to see 13)

    5/14 Interacting proteins for TACC2 (O953592, 3 ENSP000003342804) via UniProtKB, MINT, STRING, and/or I2D (see all 14)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    TTKP339812, 3, ENSP000002305104MINT-50599 MINT-50600 I2D: score=1 STRING: ENSP00000230510
    HMG20BQ9P0W22, 3, ENSP000003282694MINT-65670 I2D: score=5 STRING: ENSP00000328269
    KAT2AQ928303, ENSP000002259164I2D: score=2 STRING: ENSP00000225916
    SMARCB1Q128243, ENSP000002631214I2D: score=2 STRING: ENSP00000263121
    AURKCQ9UQB93, ENSP000003028984I2D: score=1 STRING: ENSP00000302898
    About this table

    Gene Ontology (GO): 5/7 biological process terms (GO ID links to tree view) (see all 7):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000226microtubule cytoskeleton organization ----
    GO:0008283cell proliferation ----
    GO:0021987cerebral cortex development IEA--
    GO:0022008neurogenesis IEA--
    GO:0022027interkinetic nuclear migration IEA--

    TACC2 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for TACC2
    Search CenterWatch for drugs/clinical trials and news about TACC2 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for TACC2 gene (4 alternative transcripts): 
    NM_006997.2  NM_206860.1  NM_206861.1  NM_206862.2  

    Unigene Clusters for TACC2:

    Transforming, acidic coiled-coil containing protein 2
    Hs.501252  [show with all ESTs], Hs.713875  [show with all ESTs]
    Unigene Representative Sequences: AF528099, BC029124
    18/31 Ensembl transcripts including schematic representations, and UCSC links where relevant (see all 31):
    ENST00000492689 ENST00000369005(uc001lfv.3 uc009xzx.3 uc010qtv.2)
    ENST00000513429(uc001lfw.3) ENST00000515273 ENST00000515603 ENST00000498721
    ENST00000474014 ENST00000489754 ENST00000491540 ENST00000493951 ENST00000369001(uc001lfx.3)
    ENST00000492237 ENST00000369000(uc001lfy.3) ENST00000360561(uc001lga.3 uc009xzy.3)
    ENST00000368999(uc001lfz.3) ENST00000369004 ENST00000260733 ENST00000514539(uc010qtw.1)


    miRNA
    Products:
         
    OriGene 3'-UTR Clone (see all 4): TACC2
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat TACC2
    8/28 QIAGEN miScript miRNA Assays for microRNAs that regulate TACC2 (see all 28):
    hsa-miR-3910 hsa-miR-217 hsa-miR-125a-5p hsa-miR-199b-3p hsa-miR-199a-3p hsa-miR-1278 hsa-miR-3129-5p hsa-miR-25
    SwitchGear 3'UTR luciferase reporter plasmidTACC2 3' UTR sequence
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for TACC2 (see all 7)
    OriGene shRNA RFP: TACC2
    OriGene siRNA: TACC2
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat TACC2
    Sirion Biotech Custom design and validation of potent shRNA sequences against TACC2 
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for TACC2 (see all 9)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for TACC2 (see all 4)
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector (see all 4): TACC2 (NM_006997)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for TACC2
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat TACC2 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for TACC2
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat TACC2
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat TACC2
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat TACC2

    Additional cDNA sequence: BC029124.1 

    24/29 DOTS entries (see all 29):

    DT.92436580  DT.91785837  DT.100821624  DT.102835591  DT.100821621  DT.97787283  DT.117550  DT.91665866 
    DT.121239147  DT.121239228  DT.95188118  DT.100741568  DT.121239237  DT.100000873  DT.91661197  DT.92032483 
    DT.95115888  DT.95319329  DT.101975725  DT.121239160  DT.97843751  DT.97859639  DT.121239208  DT.121239270 

    24/277 AceView cDNA sequences (see all 277):

    AA935720 CF528324 AI679077 NM_206860 F10797 F13192 AI299389 AI539158 
    CB216286 BQ011915 CA447782 AW850463 AI564711 AF095791 AK056743 AA132922 
    BG696788 BU689821 F01663 CF528952 AL713712 BC039311 BU622761 CA417838 

    GeneLoc Exon Structure

    5/18 Alternative Splicing Database (ASD) splice patterns (SP) for TACC2 (see all 18)    About this scheme

    ExUns: 1 ^ 2 ^ 3a · 3b ^ 4 ^ 5 ^ 6a · 6b · 6c · 6d ^ 7 ^ 8 ^ 9 ^ 10a · 10b ^ 11 ^ 12a · 12b ^ 13 ^ 14a · 14b · 14c · 14d · 14e · 14f · 14g ^
    SP1:                                -     -     -     -     -     -                 -     -     -                 -     -                                       
    SP2:              -     -     -     -     -     -     -     -     -           -     -     -     -                 -     -                                       
    SP3:                                                                                            -                 -     -                                       
    SP4:                                                                          -     -     -     -                 -     -                                       
    SP5:                                                                                            -                 -     -                                       

    ExUns: 15 ^ 16 ^ 17 ^ 18a · 18b ^ 19a · 19b ^ 20 ^ 21 ^ 22 ^ 23 ^ 24 ^ 25 ^ 26 ^ 27a · 27b ^ 28a · 28b ^ 29a · 29b ^ 30 ^ 31a · 31b
    SP1:              -                                                                       -           -                                       
    SP2:              -                                                                       -           -                                       
    SP3:              -                                                                       -           -                                       
    SP4:              -     -                                         -     -                 -           -                                       
    SP5:              -                                                     -                 -           -                                       


    ECgene alternative splicing isoforms for TACC2

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    TACC2 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: CTGTACATTC
    TACC2 Expression
    About this image

    TACC2 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table

    Stem Cell Differentiation: 1 LifeMap Cell 
    NameCategory
    PureStem™ mesenchymal progenitor SM30 (Embryonic Progenitor Cell)Adipose, Bone, Cartilage
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    See TACC2 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for TACC2

    SOURCE GeneReport for Unigene clusters: Hs.501252 Hs.713875

    UniProtKB/Swiss-Prot: TACC2_HUMAN, O95359
    Tissue specificity: Strongly expressed in heart, skeletal muscle, brain, prostate, thyroid and trachea

        SABiosciences Custom PCR Arrays for TACC2
    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for TACC2
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat TACC2
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat TACC2
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat TACC2
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for TACC2

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for TACC2 gene from 6/17 species (see all 17)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Tacc21 , 5 transforming, acidic coiled-coil containing protein more1, 5 74.51(n)1
    63.52(a)1
      7 (73.19 cM)5
    577521  NM_001004468.21  NP_001004468.11 
     1305774845 
    chicken
    (Gallus gallus)
    Aves TACC21 transforming, acidic coiled-coil containing protein more 74.11(n)
    74.88(a)
      423939  XM_421798.3  XP_421798.3 
    lizard
    (Anolis carolinensis)
    Reptilia TACC26
    --
    69(a)
    1 ↔ 1
    3(64118383-64179954)
    African clawed frog
    (Xenopus laevis)
    Amphibia Xl.96942 Xenopus laevis transcribed sequence with weak similarity more 85.62(n)    BJ084975.1 
    zebrafish
    (Danio rerio)
    Actinopterygii BQ169353.12   -- 77.8(n)   321181  BQ169353.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta tacc6
    transforming acidic coiled-coil protein
    12(a)
    possible ortholog
    3R(559376-574778)


    ENSEMBL Gene Tree for TACC2 (if available)
    TreeFam Gene Tree for TACC2 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for TACC2 gene
    TACC32  TACC12  
    2 SIMAP similar genes for TACC2 using alignment to 15 protein entries:     TACC2_HUMAN (see all proteins):
    TACC1    TACC3

    TACC2 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/5520 NCBI SNPs in TACC2 are shown (see all 5520    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 10 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs585855701,2
    F--117378034(+) CAACAG/AGTCCT 2 -- us2k11Minor allele frequency- A:0.07WA 118
    rs1127762601,2
    --117378499(+) AGATAA/G/TAGTCT 2 -- us2k11CSA 2
    rs70717931,2
    C,F,H--117379143(+) aggccG/Agctcc 2 -- us2k15Minor allele frequency- A:0.04NS EA WA 516
    rs562640391,2
    C,F--117379488(+) GTGCAC/TTGGGA 2 -- ut512Minor allele frequency- T:0.02NS WA 80
    rs771402831,2
    C,F--117380433(+) GCTAAC/TGCAAT 2 -- int11Minor allele frequency- T:0.04WA 118
    rs127774891,2
    C,F--117381042(+) ggactC/Tgctgt 2 -- int14Minor allele frequency- T:0.10NA 126
    rs1133301341,2
    --117381850(+) ATGGTG/AGCACC 2 -- int11Minor allele frequency- A:0.50CSA 2
    rs171028201,2
    C,F,H--117382421(+) CAAAAG/ATGAGA 2 -- int111Minor allele frequency- A:0.10NA NS EA WA CSA 804
    rs1127889881,2
    --117382430(+) GAAGTG/AGTAGA 2 -- int11Minor allele frequency- A:0.50CSA 2
    rs1125088911,2
    F--117382559(+) GAGCCG/AAAAAA 2 -- int12Minor allele frequency- A:0.50CSA 4

    HapMap Linkage Disequilibrium report for TACC2 (123748689 - 123998689 bp, first 250kb of TACC2)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 4 variations for TACC2
         3 CNVs: 48441 48440 47848
         1 Indel: 44675

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing TACC2
    DNA2.0 Custom Variant and Variant Library Synthesis for TACC2

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    TACC2 for disorders           About GeneDecksing

    OMIM gene information: 605302    OMIM disorders: --

    9 diseases for TACC2:    About MalaCards
    fanconi's anemia    multiple myeloma    breast cancer    anemia
    myeloma    alzheimer's disease    cerebritis    thyroiditis
    prostatitis

    3 Novoseek disease relationships for TACC2 gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    breast cancer 38 6 20335520 (4), 15226440 (1)
    cancer 12.6 2 15226440 (1), 20335520 (1)
    tumors 0 5 15226440 (4), 14603251 (1)

    Human Genome Epidemiology (HuGE) Navigator: TACC2 (4 documents)

    Export disorders for TACC2 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for TACC2 gene, integrated from 9 sources (see all 41):
    (articles sorted by number of sources associating them with TACC2)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. The transforming acidic coiled coil proteins interact with nuclear histone acetyltransferases. (PubMed id 14767476)1, 2, 3 Gangisetty O.... Still I.H. (2004)
    2. TTK kinase is essential for the centrosomal localization of TACC2. (PubMed id 15304323)1, 2, 9 Dou Z.... Yao X. (2004)
    3. A probability-based approach for high-throughput protein phosphorylation analysis and site localization. (PubMed id 16964243)1, 2 Beausoleil S.A.... Gygi S.P. (2006)
    4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    5. The DNA sequence and comparative analysis of human chromosome 10. (PubMed id 15164054)1, 2 Deloukas P.... Rogers J. (2004)
    6. Molecular cloning, genomic structure and interactions of the putative breast tumor suppressor TACC2. (PubMed id 12620397)1, 2 Lauffart B.... Still I.H. (2003)
    7. Cloning and structural characterization of ECTACC, a new member of the transforming acidic coiled coil (TACC) gene family: cDNA sequence and expression analysis in human microvascular endothelial cells. (PubMed id 11161455)1, 2 Pu J.J.... Banerjee D. (2001)
    8. AZU-1: a candidate breast tumor suppressor and biomarker for tumor progression. (PubMed id 10749935)1, 2 Chen H.-M....Bissell M.J. (2000)
    9. The TACC domain identifies a family of centrosomal proteins that can interact with microtubules. (PubMed id 11121038)1, 2 Gergely F....Raff J.W. (2000)
    10. Transforming acidic coiled-coil-containing protein 2 (TACC2) in human breast cancer, expression pattern and clinical/prognostic rele vance. (PubMed id 20335520)1, 9 Cheng S....Jiang W.G. (2010)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 10579 HGNC: 11523 AceView: TACC2 Ensembl:ENSG00000138162 euGenes: HUgn10579
    ECgene: TACC2 H-InvDB: TACC2

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for TACC2 Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for TACC2 Genetics and Cytogenetics in Oncology and Haematology

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for TACC2 gene:
    Search GeneIP for patents involving TACC2

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0 and Sirion Biotech, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, LifeMap BioReagents, and Sirion Biotech, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences, In Situ Hybridization Assays from
    Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory)
    About This Section

     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Browse Antibodies   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
     OriGene Antibodies for TACC2   OriGene shRNA RFP for TACC2  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for TACC2   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for TACC2  
     Browse OriGene Protein Over-expression Lysates   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for TACC2   OriGene 3'-UTR Clone for TACC2  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for TACC2   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for TACC2  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     Browse OriGene full length recombinant human proteins expressed in human HEK293 cells   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for TACC2   OriGene Custom Protein Services for TACC2  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat TACC2
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing TACC2
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat TACC2
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat TACC2
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat TACC2
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat TACC2
     GenScript Custom Purified and Recombinant Proteins Services for TACC2 GenScript cDNA clones with any tag delivered in your preferred vector for TACC2
     GenScript Custom Assay Services for TACC2 GenScript Custom Superior Antibodies Services for TACC2
     GenScript Custom overexpressing Cell Line Services for TACC2 CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Search for Antibodies & Assays

     Regulatory tfbs in TACC2 promoter
     Search Chromatin IP Primers for TACC2
     RT2 qPCR Primer Assay in human, mouse, rat TACC2
     GNC Network for TACC2
     SABiosciences Custom PCR Arrays for TACC2
     Search Tocris compounds for TACC2
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological cDNA Clones
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     TACC2 antibodies
     TACC2 lysates
     Antibodies for TACC2
     See all of Abcam's Antibodies, Kits and Proteins for TACC2
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins




     TACC2 Proteins, Antibodies, CLIAs, and ELISAs
     Search LifeMap BioReagents cell lines for TACC2
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for TACC2
     SwitchGear 3'UTR luciferase reporter plasmids for TACC2
     SwitchGear Promoter luciferase reporter plasmids for TACC2
     ThermoFisher Antibodies for TACC2
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat TACC2
     inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for TACC2
    Sirion Biotech Customized:
     stable knockdown cell line services for TACC2
     inducible knockdown cell line services for TACC2
     design and validation of potent shRNA sequences against TACC2
     adenovirus for potent knockdown of TACC2
     adenovirus for overexpression
     stable overexpressing cell line services
     inducible overexpressing cell line services
           
    GeneCards Homepage - Last full update: 18 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013 , 13 May 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      TACC2 gene at Home site.
    hostname: 356977-web1.xennexinc.com index build: 106 solr: 1.4