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Aliases & Descriptions for TAC3
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases NKB 1 , 2 NKNB 2 , 3 , 5 PRO1155 2 ZNEUROK1 1 , 2 , 3
Descriptions gamma tachykinin 3 2 neurokinin B-like protein 2 neurokinin beta 1 , 2 neurokinin-B protein 2 neuromedin K 1 neuromedin K, neurokinin beta 2 preprotachykinin B 2 tachykinin 3 2
Search outside databases for aliases for TAC3 genePrevious GC identifers: GC12M057378 GC12M057628 GC12M057120
Summaries for TAC3 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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UniProtKB/Swiss-Prot: TKNK_HUMAN, Q9UHF0 Function : Tachykinins are active peptides which excite neurons, evoke behavioral responses, arepotent vasodilators and secretagogues, and contract (directly or indirectly) many smooth muscles(By similarity)
Gene Wiki entry for TAC3
Genomic Location for TAC3
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the TAC3 gene Entrez Gene cytogenetic band: 12q13-q21 Ensembl cytogenetic band: 12q13.3 HGNC cytogenetic band: 12q13-q21 TAC3 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 12 GeneLoc Exon Structure
GeneLoc location for GC12M055690:
(about GC identifiers )
Start:
55,690,051 bp from pter
End:
55,696,592 bp from pter
Size:
6,542 bases
Orientation:
minus strand
RefSeq DNA sequence: NC_000012.10 NT_029419.11 Proteins for TAC3
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: TKNK_HUMAN, Q9UHF0 (See
protein sequence )Recommended Name: Tachykinin-3 precursor Size : 121 amino acids; 13438 Da
Subcellular location : Secreted
Developmental stage : In pregnancy, the expression of NKB is confined to the outersyncytiotrophoblast of the placenta, significant concentrations of NKB can be detected in plasmaas early as week 9, and plasma concentrations of NKB are grossly elevated in pregnancy-inducedhypertension and pre-eclampsia
PDB structures from and Proteopedia : 1P9F (3D)
 
Secondary accessions : Q6IAG2 Q71BC6 Q71BC9Alternative splicing : 3 isoforms : Q9UHF0-1 Q9UHF0-2 Q9UHF0-3
REFSEQ proteins (2 alternative transcripts):
NP_001006668.1 NP_037383.1 ENSEMBL proteins: ENSP00000350236 ENSP00000377445 ENSP00000300108 ENSP00000368721 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 3 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for TAC3: Assays for TAC3:
Protein
Domains/ Families for TAC3(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry Q9UHF0 ProtoNet protein and cluster: Q9UHF0
1 Blocks protein family : IPB002040 Tachykinin/Neurokinin UniProtKB/Swiss-Prot: TKNK_HUMAN, Q9UHF0 Similarity : Belongs to the tachykinin family
Gene Function for TAC3
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
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Millipore ,
OriGene , and/or
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SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_001006667 Applied Biosystems Silencer ® siRNAs for TAC3 Sigma-Aldrich siRNA for TAC3 Sigma-Aldrich shRNA for TAC3 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001006667                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001006667                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_001006667  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001006667 UniProtKB/Swiss-Prot: TKNK_HUMAN, Q9UHF0 Function : Tachykinins are active peptides which excite neurons, evoke behavioral responses, arepotent vasodilators and secretagogues, and contract (directly or indirectly) many smooth muscles(By similarity)
Genatlas biochemistry entry for TAC3 :tachykinin 3,neurokinin B (neuromedin K) 1 MGI phenotypic allele for Tac2 (no phenotypes)1 Gene Ontology (GO) molecular function term (links to tree view) :
About this table
Pathways & Interactions for TAC3
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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5/15 Interacting proteins for TAC3 (Q9UHF0 2 ENSP00000350236 3 ) via UniProtKB, MINT, and/or STRING (see all 15
)About this table 3 Gene Ontology (GO) biological process terms (links to tree view) :
About this table
Drugs & Compounds for TAC3 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Compounds for TAC3 available from Tocris Bioscience Compound Action
CAS
number Neurokinin B (human, porcine) Endogenous tachykinin peptide [86933-75-7] SB 222200 Potent, selective non-peptide NK3 antagonist. Brain penetrant [174635-69-9] SB 218795 Potent, selective non-peptide NK3 antagonist [174635-53-1] Senktide Tachykinin NK3 agonist [106128-89-6]
About this table 10/12 Novoseek chemical compound relationships for TAC3 gene (see all 12
)
Compound
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
senktide
93.27
19
10953048 (2), 8818331 (2), 7830490 (1), 9667146 (1) (see all 13 )
eledoisin
86.80
9
1708071 (3), 1712834 (1), 16127708 (1), 1694464 (1) (see all 5 )
septide
85.77
5
7824047 (1), 8882625 (1), 10753681 (1)
physalaemin
76.53
6
1708071 (3), 1694464 (1), 7824047 (1)
kassinin
74.68
3
8859022 (1), 7684358 (1)
bestatin
54.08
2
12788812 (1), 11071311 (1)
fmlp
18.55
2
7684358 (2)
superoxide
13.87
4
1704475 (1), 1697194 (1), 7684358 (1), 10189055 (1)
estradiol
0.00
1
7529897 (1)
nitric oxide
0.00
2
8751080 (1), 8882625 (1)
About this table
Transcripts for TAC3(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
Tagged/untagged cDNA clones from
OriGene , Expression Assays from Applied Biosystems )About This Section
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_001006667 Sigma-Aldrich siRNA for TAC3 Sigma-Aldrich shRNA for TAC3 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_013251
REFSEQ mRNAs for TAC3 gene (2 alternative transcripts): NM_001006667.1 NM_013251.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_013251
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001006667                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001006667                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_001006667  
Additional cDNA sequence: AF186112.1 AF216586.1 AF537115.1 AF537118.1 AY358679.1 BC032145.2 CR457193.1 CR620932.1
4 DOTS entries : DT.410221 DT.101983456 DT.101983455 DT.101974196
24/81 AceView cDNA sequences (see all 81
):BC032145 BX118017 AF186112 BC059387 NM_005379 AF537116 CD620409 AI832211 AF537114 AF105424 AF537119 AF127026 AF537121 BX114126 AI139283 AF537118 BG002828 AF537117 CD620413 AF537120 CR620932 AF537113 AY358679 AF537115
highest scoring ESTs for TAC3 :AA004764 AF186112 AF216586 AF537113 AF537114 AF537115 AF537116 AF537117 AF537118 AF537119
Unigene Cluster for TAC3: Tachykinin 3 Hs.9730 [show with all ESTs ] Unigene Representative Sequence: AY358679 GeneLoc Exon Structure 5/10 Alternative Splicing Database (ASD) splice patterns (SP) for TAC3 (see all 10
) ExUns: 1a · 1b · 1c ^ 2 ^ 3 ^ 4a · 4b ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10a · 10b SP1 :             -                 SP2 :             -           -       SP3 :             -     -             SP4 :             -         -   -       SP5 :             -     -       -      
About this scheme ECgene alternative splicing isoforms for TAC3 4 Ensembl transcripts including schematic representations : ENST00000357616
ENST00000393867
ENST00000300108
ENST00000379411
Expression for TAC3
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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TAC3 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for TAC3 1 / 2 / 3
3 probe-sets matching TAC3 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: ACTTCTTTGTSOURCE GeneReport for Unigene cluster: Hs.9730
Orthologs for TAC3
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for TAC3 gene from 5 species
About this table Species with no ortholog for TAC3 ENSEMBL Gene Tree for TAC3 Paralogs for TAC3 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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SNPs/Variants for TAC3 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for TAC3 (up to first 250kb)
Disorders & Mutations for TAC3
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 162330 disorders : 146110
4 Novoseek disease relationships for TAC3 gene
About this table Human Gene Mutation Database : TAC3 Human Genome Epidemiology Navigator: TAC3 (3 documents)
Medical News for TAC3 (Possibly Related Articles in
Doctor's Guide )
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Publications for TAC3 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/130 PubMed articles for TAC3 gene (see all 130
): Excessive placental secretion of neurokinin B during the third trimester causes pre-eclampsia. (PubMed id 10866201) 1, 2, 3, 4 Page N.M....Lowry P.J. (2000) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 3, 4 Gerhard D.S....Malek J. (2004) The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PubMed id 12975309) 3, 4 Clark H.F....Gray A. (2003) A cDNA encoding the precursor of the rat neuropeptide, neurokinin B. (PubMed id 3479225) 2, 3 Bonner T.I....Young W.S. (1987) Neurokinin B causes concentration-dependent relaxation of isolated human placental resistance vessels. (PubMed id 14700748) 1, 3 Laliberte C....Kaufman S. (2004) Gene regulation of neurokinin B and its receptor NK3 in late pregnancy and pre-eclampsia. (PubMed id 16709596) 1, 3 Page N.M....Morrish D.W. (2006) Hypertrophy and increased gene expression of neurons containing neurokinin-B and substance-P messenger ribonucleic acids in the hypothalami of postmenopausal women. (PubMed id 1708331) 1, 3 Rance N.E. and Young W.S. (1991) Third trimester plasma neurokinin B levels in women with and without preeclampsia. (PubMed id 18240076) 1, 3 Geissbuehler V....Moser R. (2008) Neurokinin B is a paracrine vasodilator in the human fetal placental circulation. (PubMed id 12727971) 1, 3 Brownbill P....Sibley C.P. (2003) Placental neurokinin B mRNA expression increases at preterm labor. (PubMed id 17561251) 1, 3 Torricelli M....Petraglia F. (2007)
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Genome Databases showing TAC3
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing TAC3
(According to HUGE )
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Specialized Databases showing TAC3 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for TAC3 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Products for TAC3:
Tocris compounds for TAC3
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