TAC1 Gene
protein-coding GIFtS : 62
GC07P097199
tachykinin, precursor 1 (Previous names: tachykinin, precursor 1 (substance K, substance P, neurokinin 1, neurokinin 2, neuromedin L, neurokinin alpha, neuropeptide K, neuropeptide gamma) )Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database (Previous symbols: TAC2, NKNA )
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Aliases & Descriptions for TAC1
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Descriptions neurokinin 1 2 neurokinin 2 2 neurokinin A 2 neurokinin alpha 2 neuromedin L 2 neuropeptide K 2 neuropeptide gamma 2 substance K 2 substance P 2 tachykinin 1 2 tachykinin 2 2 tachykinin, precursor 1 2 tachykinin, precursor 1 (substance K, substance P, neurokinin 1, neurokinin 2, neuromedin L, neurokinin alpha, neuropeptide K, neuropeptide gamma) 1 , 2
Search outside databases for aliases for TAC1 genePrevious GC identifers: GC07P095896 GC07P096959 GC07P096973 GC07P097006
Summaries for TAC1 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for TAC1 : This gene encodes four products of the tachykinin peptide hormone family, substance P andneurokinin A, as well as the related peptides, neuropeptide K and neuropeptide gamma. Thesehormones are thought to function as neurotransmitters which interact with nerve receptors andsmooth muscle cells. They are known to induce behavioral responses and function as vasodilatorsand secretagogues. Multiple transcript variants encoding different isoforms have been found forthis gene. [provided by RefSeq] UniProtKB/Swiss-Prot: TKN1_HUMAN, P20366 Function : Tachykinins are active peptides which excite neurons, evoke behavioral responses, arepotent vasodilators and secretagogues, and contract (directly or indirectly) many smooth muscles
Gene Wiki entry for TAC1
Genomic Location for TAC1
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the TAC1 gene Entrez Gene cytogenetic band: 7q21-q22 Ensembl cytogenetic band: 7q21.3 HGNC cytogenetic band: 7q21-q22 TAC1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 7 GeneLoc Exon Structure
GeneLoc location for GC07P097199:
(about GC identifiers )
Start:
97,199,311 bp from pter
End:
97,207,720 bp from pter
Size:
8,410 bases
Orientation:
plus strand
1 alternative location : Chr 7+,CRA_TCAG 96,683,863-96,692,272
RefSeq DNA sequence: NC_000007.12 NT_007933.14 NT_079595.2 Proteins for TAC1
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: TKN1_HUMAN, P20366 (See
protein sequence )Recommended Name: Protachykinin-1 precursor Size : 129 amino acids; 15003 Da
Subcellular location : Secreted
PDB structures from and Proteopedia : 2B19 (3D)
 
Secondary accessions : O60600 O60601 Q00072 Q53GH4Alternative splicing : 4 isoforms : P20366-1 P20366-2 P20366-3 P20366-4
REFSEQ proteins (4 alternative transcripts):
NP_003173.1 NP_054702.1 NP_054703.1 NP_054704.1 ENSEMBL proteins: ENSP00000289574 ENSP00000289576 ENSP00000321106 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 4 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for TAC1: Assays for TAC1:
Protein
Domains/ Families for TAC1(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P20366 ProtoNet protein and cluster: P20366
1 Blocks protein family : IPB002040 Tachykinin/Neurokinin UniProtKB/Swiss-Prot: TKN1_HUMAN, P20366 Similarity : Belongs to the tachykinin family
Gene Function for TAC1
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 4 ): NM_003182 Applied Biosystems Silencer ® siRNAs for TAC1 Sigma-Aldrich siRNA for TAC1 Sigma-Aldrich shRNA Panels and shRNA for TAC1 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 4 ): NM_003182                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 4 ): NM_003182                                  untagged cDNA clones in CMV expression vector (see all 4 ): NM_003182  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_003182 UniProtKB/Swiss-Prot: TKN1_HUMAN, P20366 Function : Tachykinins are active peptides which excite neurons, evoke behavioral responses, arepotent vasodilators and secretagogues, and contract (directly or indirectly) many smooth muscles
Genatlas biochemistry entry for TAC1 :tachykinin 1,neurokinin A (substance K) and substance P precursor gene
4 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for Tac1) : Pathways & Interactions for TAC1
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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1 Sigma-Aldrich "Your Favorite Gene" Pathway for TAC1 (Your Favorite Gene powered by Ingenuity) Gene Network CentralTM Interacting Genes and Proteins Network for TAC1 5/27 Interacting proteins for TAC1 (P20366 2 ENSP00000321106 3 ) via UniProtKB, MINT, and/or STRING (see all 27
)About this table 5/9 Gene Ontology (GO) biological process terms (links to tree view) (see all 9
):
GO ID Qualified GO term Evidence PubMed IDs GO:0006954 inflammatory response
IEA -- GO:0007204 elevation of cytosolic calcium ion concentration
IDA 8957234 GO:0007217 tachykinin receptor signaling pathway
IEA -- GO:0007218 neuropeptide signaling pathway
IEA -- GO:0007268 synaptic transmission
IEA --
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Drugs & Compounds for TAC1 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Compounds for TAC1 available from Tocris Bioscience Compound Action
CAS
number MEN 10376 Potent, selective NK2 antagonist [135306-85-3] GR 159897 Non-peptide, potent NK2 antagonist [158848-32-9] GR 94800 Potent, selective NK2 antagonist [141636-65-9] GR 64349 Potent, selective NK2 agonist [137593-52-3] MEN 10627 Potent, selective NK2 antagonist [157351-81-0]
About this table 10/49 Novoseek chemical compound relationships for TAC1 gene (see all 49
)
Compound
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
senktide
93.08
55
7544197 (5), 7824047 (3), 9543242 (2), 8864543 (2) (see all 28 )
sr48968
91.14
28
7961636 (2), 18601911 (2), 11591520 (1), 14718265 (1) (see all 21 )
eledoisin
87.56
44
1708071 (3), 1712834 (2), 1719434 (2), 1707714 (1) (see all 22 )
fk 224
87.16
10
8665034 (2), 8726939 (1), 9302648 (1), 9243258 (1) (see all 6 )
septide
86.56
41
9786514 (3), 8985159 (3), 8786533 (2), 10214937 (2) (see all 13 )
fk 888
84.64
8
7889271 (2), 9302648 (1), 7534186 (1), 8529964 (1) (see all 7 )
cyclo(gln-trp-phe-gly-leu-met)
80.90
8
7544197 (1), 14985054 (1), 1964226 (1), 1713430 (1) (see all 5 )
gr 73632
77.95
4
1707714 (1), 7688875 (1), 7538871 (1)
kassinin
76.93
14
11245256 (1), 7532211 (1), 8859022 (1), 8702757 (1) (see all 7 )
gr 82334
74.42
2
7538871 (1), 8846430 (1)
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Transcripts for TAC1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
Tagged/untagged cDNA clones from
OriGene , Expression Assays from Applied Biosystems )About This Section
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 4 ): NM_003182 Sigma-Aldrich siRNA for TAC1 Sigma-Aldrich shRNA Panels and shRNA for TAC1 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_003182 NM_013996 NM_013997 NM_013998
REFSEQ mRNAs for TAC1 gene (4 alternative transcripts): NM_003182.2 NM_013996.2 NM_013997.2 NM_013998.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_003182 NM_013996 NM_013997 NM_013998
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 4 ): NM_003182                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 4 ): NM_003182                                  untagged cDNA clones in CMV expression vector (see all 4 ): NM_003182  
Additional cDNA sequence: AF050655.1 AF050656.1 AF050657.1 AF050658.1 AK222957.1 BC018047.1 CR407602.1 CR541730.1 M68906.1 M68907.1 U37529.1 X54469.1
4 DOTS entries : DT.110616 DT.86746127 DT.95163775 DT.121056930
24/43 AceView cDNA sequences (see all 43
):CD676459 AF050656 AU105584 AF050658 M68907 AF050655 AF050657 CR407602 AA814651 CR541730 AU099398 BQ446483 BI669433 BI669514 U37529 NM_013998 BC018047 BM712701 M68906 BG714365 X54469 BI552074 NM_003182 NM_013997
highest scoring ESTs for TAC1 :U37529 AA446659 AA805229 AI277203 AI915903 AW340043 BC018047 BG708147 BG708227 BG714365
Unigene Cluster for TAC1: Tachykinin, precursor 1 Hs.2563 [show with all ESTs ] Unigene Representative Sequence: NM_003182 GeneLoc Exon Structure 3 Ensembl transcripts including schematic representations : ENST00000346867
ENST00000350485
ENST00000319273
Expression for TAC1
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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TAC1 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for TAC1 1 / 2 / 3
3 probe-sets matching TAC1 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: TTTTGTGACTSOURCE GeneReport for Unigene cluster: Hs.2563 Expression variation in blood from EXPOLDB for TAC1
Orthologs for TAC1
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for TAC1 gene from 5/7 species (see all 7
)
About this table Species with no ortholog for TAC1 ENSEMBL Gene Tree for TAC1 Paralogs for TAC1 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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SNPs/Variants for TAC1 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for TAC1 (up to first 250kb)
Disorders & Mutations for TAC1
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 162320 10/59 Novoseek disease relationships for TAC1 gene (see all 59
)
Disease
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
inflammation
53.44
41
9038887 (1), 16290928 (1), 17170385 (1), 2390021 (1) (see all 33 )
asthma
53.26
65
14749007 (6), 18507649 (5), 15707850 (4), 11991878 (3) (see all 30 )
astrocytoma
38.51
4
7875535 (1), 10415087 (1), 7521949 (1), 10753681 (1)
migraine
35.42
12
8536297 (2), 16472331 (1), 9399010 (1), 17222167 (1) (see all 6 )
motility disorder
34.80
1
14670823 (1)
serotonin syndrome
27.11
3
9637018 (2)
bronchitis chronic
26.22
1
12794061 (1)
carcinoid
21.51
3
9296223 (1), 14713258 (1), 16556667 (1)
allergic rhinitis
12.12
1
10547475 (1)
colitis ulcerative
10.20
3
16033908 (1), 11916195 (1)
About this table Genetic Association Database: TAC1 Human Genome Epidemiology Navigator: TAC1 (7 documents)
Medical News for TAC1 (Possibly Related Articles in
Doctor's Guide )
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Publications for TAC1 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/703 PubMed articles for TAC1 gene (see all 703
): Tachykinin (substance-P) gene expression in Leydig cells of the human and mouse testis. (PubMed id 1708336) 2, 3, 4 Chiwakata C....Ivell R. (1991) Three-dimensional structure of neuropeptide K bound to dodecylphosphocholine micelles. (PubMed id 16503654) 1, 3, 4 Dike A. and Cowsik S.M. (2006) Characterization of the C-terminal flanking peptide of human beta- preprotachykinin. (PubMed id 2284201) 1, 3, 4 McGregor G.P. and Conlon J.M. (1990) Haplotype analysis of the preprotachykinin-1 (TAC1) gene in multiple sclerosis. (PubMed id 15729363) 3, 6 Cunningham S....Vandenbroeck K. (2005) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 3, 4 Gerhard D.S....Malek J. (2004) Identification of a delta isoform of preprotachykinin mRNA in human mononuclear phagocytes and lymphocytes. (PubMed id 9846828) 3, 4 Lai J.P....Ho W.Z. (1998) Isolation and characterization of neurokinin A, neurokinin A(3-10) and neurokinin A(4-10) from a neutral water extract of a metastatic ileal carcinoid tumour. (PubMed id 3038549) 3, 4 Theodorsson-Norheim E.... Jacobsson G. (1987) cDNA sequence of human beta-preprotachykinin, the common precursor to substance P and neurokinin A. (PubMed id 3770210) 3, 4 Harmar A.J.... Fink G. (1986) [Change of neurokinin A plasma level in asthmatic children] (PubMed id 14749007) 1, 3 Shang Y.X....Wei K.L. (2003) Sputum neurokinin A in Egyptian asthmatic children and adolescents: relation to exacerbation severity. (PubMed id 18507649) 1, 3 Mostafa G.A....Ahmed S.A. (2008)
Search for TAC1
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AND OR
Aliases
TAC1 (Gene Symbol) Hs.2563 NK2 NKA NKNA NPK PPT TAC2 neurokinin 1 neurokinin 2 neurokinin A neurokinin alpha neuromedin L neuropeptide K neuropeptide gamma substance K substance P tachykinin 1 tachykinin 2 tachykinin, precursor 1 tachykinin, precursor 1 (substance K, substance P, neurokinin 1, neurokinin 2, neuromedin L, neurokinin alpha, neuropeptide K, neuropeptide gamma)
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OMIM
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Genome Databases showing TAC1
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing TAC1
(According to HUGE )
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Specialized Databases showing TAC1 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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Name Description
Wikipedia http://en.wikipedia.org/wiki/Neurokinin_1
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-- Services for TAC1 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Products for TAC1:
Tocris compounds for TAC1
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Aliases for TAC1
Databases for TAC1
Disorders for TAC1
Domains/Families for TAC1
Drugs/Compounds for TAC1
Expression for TAC1
Function for TAC1
Location for TAC1
Medical News for TAC1
Orthologs for TAC1
Paralogs for TAC1
Pathways/Interactions for TAC1
Proteins for TAC1
Publications for TAC1
SNPs for TAC1
Search Box for TAC1
Services for TAC1
Summaries for TAC1
Technologies for TAC1
Transcripts for TAC1
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009