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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

TAB3 Gene

protein-coding   GIFtS: 57
GCID: GC0XM030845

TGF-beta activated kinase 1/MAP3K7 binding protein 3

(Previous name: mitogen-activated protein kinase kinase kinase 7 interacting...)
(Previous symbol: MAP3K7IP3)
 Explore 2 diseases affiliated with
TAB3 via our new
 Human Malady Compendium 
Biological research products
for TAB3
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
TGF-Beta Activated Kinase 1/MAP3K7 Binding Protein 31 2     TGF-Beta-Activated Kinase 1-Binding Protein 32 3
MAP3K7IP31 2 3     NAP12
Mitogen-Activated Protein Kinase Kinase Kinase 7 Interacting Protein 31 2     NFkB Activating Protein 12
TAB-32 3     TGF-Beta-Activated Kinase 1 And MAP3K7-Binding Protein 32
NF-Kappa-B-Activating Protein 12 3     Mitogen-Activated Protein Kinase Kinase Kinase 7-Interacting Protein 33
TAK1-Binding Protein 32 3     

External Ids:    HGNC: 306811   Entrez Gene: 2573972   Ensembl: ENSG000001576257   OMIM: 3004805   UniProtKB: Q8N5C83   

Export aliases for TAB3 gene to outside databases

Previous GC identifers: GC0XM030209 GC0XM030608 GC0XM028586


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for TAB3:
The product of this gene functions in the NF-kappaB signal transduction pathway. The encoded protein, and the similar
and functionally redundant protein MAP3K7IP2/TAB2, forms a ternary complex with the protein kinase MAP3K7/TAK1 and
either TRAF2 or TRAF6 in response to stimulation with the pro-inflammatory cytokines TNF or IL-1. Subsequent
MAP3K7/TAK1 kinase activity triggers a signaling cascade leading to activation of the NF-kappaB transcription factor.
The human genome contains a related pseudogene. Alternatively spliced transcript variants have been described, but
their biological validity has not been determined. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: TAB3_HUMAN, Q8N5C8
Function: Adapter linking MAP3K7/TAK1 and TRAF6 or TRAF2. Mediator of MAP3K7 activation, respectively in the IL1 and
TNF signaling pathways. Plays a role in activation of NF-kappa-B and AP1 transcription factor. Isoform 2 may be an
oncogenic factor

Gene Wiki entry for TAB3 (MAP3K7IP3)


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000023.10  NC_018934.1  NT_167197.1  
Regulatory elements:
   Search SABiosciences Regulatory transcription factor binding sites for TAB3
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidTAB3 promoter sequence
   Search SABiosciences Chromatin IP Primers for TAB3

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat TAB3


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: Xp21.2   Ensembl cytogenetic band:  Xp21.2   HGNC cytogenetic band: Xp21.2

TAB3 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
TAB3 gene location

GeneLoc information about chromosome X         GeneLoc Exon Structure

GeneLoc location for GC0XM030845:  view genomic region     (about GC identifiers)

Start:
30,845,559 bp from pter      End:
30,993,201 bp from pter
Size:
147,643 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: TAB3_HUMAN, Q8N5C8 (See protein sequence)
Recommended Name: TGF-beta-activated kinase 1 and MAP3K7-binding protein 3  
Size: 712 amino acids; 78683 Da
Subunit: Interacts with TAB1, TAB2, MAP3K7, TRAF2 and TRAF6. The minimal TAB3-containing complex (TAB1-MAP3K7-TAB3)
appears not to contain TAB2. However, it seems sensible to consider that TAB2 may also join this complex and may act
in a cooperative manner with TAB3. Interacts with WDR34 (via the WD domains). Interacts with RBCK1. Binds
'Lys-63'-linked polyubiquitin chains. Interacts with TRIM5
Secondary accessions: A6NDD9 Q6VQR0
Alternative splicing: 2 isoforms:  Q8N5C8-1   Q8N5C8-2   

Explore the universe of human proteins at neXtProt for TAB3: NX_Q8N5C8

Post-translational modifications:

  • Ubiquitinated; following IL1 stimulation or TRAF6 overexpression1
  • Phosphorylated at Ser-506 by MAPKAPK2 and MAPKAPK3 following IL1 treatment1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q8N5C8

  • TAB3 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_690000.2  
    ENSEMBL proteins: 
     ENSP00000368215   ENSP00000433193   ENSP00000368210   ENSP00000368212   ENSP00000288422  
     ENSP00000368214  
    Reactome Protein details: Q8N5C8
    Human Recombinant Protein Products: 
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    Browse OriGene Protein Over-expression Lysates
    OriGene Custom Protein Services for TAB3 
    GenScript Custom Purified and Recombinant Proteins Services for TAB3
    Novus Biologicals TAB3 Proteins
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for TAB3

    Gene Ontology (GO): 3 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005829cytosol TAS--
    GO:0005886plasma membrane TAS--
    GO:0010008endosome membrane TAS--


    TAB3 for ontologies           About GeneDecksing



    TAB3 Antibody Products: 
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    ThermoFisher Antibodies for TAB3

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    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for TAB3


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    TAB3 for domains           About GeneDecksing

    2 InterPro domains/families:
     IPR001876 Znf_RanBP2
     IPR003892 CUE

    Graphical View of Domain Structure for InterPro Entry Q8N5C8

    ProtoNet protein and cluster: Q8N5C8

    2 Blocks protein families:
    IPB001876 Zn-finger
    IPB003892 Ubiquitin system component Cue


    UniProtKB/Swiss-Prot: TAB3_HUMAN, Q8N5C8
    Domain: The RanBP2-type zinc finger (NZF) mediates binding to two consecutive 'Lys-63'-linked ubiquitins (By
    similarity)
    Similarity: Contains 1 CUE domain
    Similarity: Contains 1 RanBP2-type zinc finger


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: TAB3_HUMAN, Q8N5C8
    Function: Adapter linking MAP3K7/TAK1 and TRAF6 or TRAF2. Mediator of MAP3K7 activation, respectively in the IL1 and
    TNF signaling pathways. Plays a role in activation of NF-kappa-B and AP1 transcription factor. Isoform 2 may be an
    oncogenic factor

    miRNA
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    OriGene 3'-UTR Clone: TAB3
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat TAB3
    8/113 QIAGEN miScript miRNA Assays for microRNAs that regulate TAB3 (see all 113):
    hsa-miR-549 hsa-miR-520f hsa-miR-3607-3p hsa-miR-188-5p hsa-miR-199a-3p hsa-miR-15a hsa-miR-128 hsa-miR-30d
    SwitchGear 3'UTR luciferase reporter plasmidTAB3 3' UTR sequence
    Inhib. RNA
    Products:
        
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    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for TAB3 (see all 4)
    OriGene shRNA RFP: TAB3
    OriGene siRNA: TAB3
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat TAB3

    Gene Editing
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    Clone
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    DNA2.0 Custom Codon Optimized Gene Synthesis Service for TAB3
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat TAB3 

    Cell Line
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    Search LifeMap BioReagents cell lines for TAB3

    In Situ Assay
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for TAB3

    Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005515protein binding IPI17158449
    GO:0008270zinc ion binding IEA--


    TAB3 for ontologies           About GeneDecksing


    1 GenomeRNAi human phenotype for TAB3:
     Increased cell death HMECs cel 

    Animal Models:
         1 MGI mutant phenotype (inferred from 1 allele(MGI details for Tab3):
     normal 

    TAB3 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/10 super-pathways (see all 10About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1TRAF6 Mediated Induction of proinflammatory cytokines
    8/19 pathways (see all 19)
    TRAF6 Mediated Induction of proinflammatory cytokines1.00
    Toll Like Receptor TLR1:TLR2 Cascade0.78
    MAP kinase activation in TLR cascade0.88
    Toll Like Receptor 2 (TLR2) Cascade0.78
    Toll Like Receptor 5 (TLR5) Cascade0.86
    MyD88:Mal cascade initiated on plasma membrane0.78
    Toll Like Receptor 10 (TLR10) Cascade0.86
    TRIF-mediated TLR3/TLR4 signaling 0.73
    2JNK (c-Jun kinases) phosphorylation and activation mediated by activated human TAK1
    JNK (c-Jun kinases) phosphorylation and activation mediated by activated human TAK11.00
    activated TAK1 mediates p38 MAPK activation0.58
    TAK1 is activated0.60
    TAK1 activates NFkB by phosphorylation and activation of IKKs complex0.56
    3Nucleotide-binding domain, leucine rich repeat containing receptor (NLR) signaling pathways
    Nucleotide-binding domain, leucine rich repeat containing receptor (NLR) signaling pathways1.00
    NOD-like receptor signaling pathway0.36
    NOD1/2 Signaling Pathway0.69
    4Signal Transduction
    IRAK2 mediated activation of TAK1 complex0.40
    TAK1 is activated within the TAK1 complex0.00
    IRAK2 mediated activation of TAK1 complex upon TLR7/8 or 9 stimulation0.40
    5Immune System
    Immune System1.00
    Innate Immune System0.46

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    1 BioSystems Pathway for TAB3 
        TNF-alpha/NF-kB Signaling Pathway

    5/34        Reactome Pathways for TAB3 (see all 34)
        TAK1 is activated within the TAK1 complex
    Toll Like Receptor 2 (TLR2) Cascade
    Toll Like Receptor TLR6:TLR2 Cascade
    IRAK2 mediated activation of TAK1 complex
    TAK1 activates NFkB by phosphorylation and activation of IKKs complex


    1         Kegg Pathway  (Kegg details for TAB3):
        NOD-like receptor signaling pathway


    TAB3 for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for TAB3

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/36 Interacting proteins for TAB3 (Q8N5C81, 2, 3 ENSP000002884224) via UniProtKB, MINT, STRING, and/or I2D (see all 36)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    BECN1Q144572, ENSP000003552314MINT-8304392 MINT-8303905 MINT-8327871 MINT-8304450 MINT-8304506 MINT-8304232 MINT-8303946 MINT-8304218 MINT-8304320 STRING: ENSP00000355231
    MAP3K7O433182, 3, ENSP000003583354MINT-49237 MINT-8303905 MINT-8303937 MINT-48036 I2D: score=4 STRING: ENSP00000358335
    MAP3K7CLP570772, 3, ENSP000003432124MINT-67362 I2D: score=4 STRING: ENSP00000343212
    TAB1Q157503, ENSP000002161604I2D: score=3 STRING: ENSP00000216160
    RBCK1Q9BYM83, ENSP000003486324I2D: score=1 STRING: ENSP00000348632
    About this table

    Gene Ontology (GO): 5/17 biological process terms (GO ID links to tree view) (see all 17):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000187activation of MAPK activity TAS--
    GO:0002224toll-like receptor signaling pathway TAS--
    GO:0002755MyD88-dependent toll-like receptor signaling pathway TAS--
    GO:0002756MyD88-independent toll-like receptor signaling pathway TAS--
    GO:0007249I-kappaB kinase/NF-kappaB cascade TAS--


    TAB3 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    TAB3 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for TAB3
    1 Novoseek chemical compound relationship for TAB3 gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    tab-2 97.5 25 14670075 (6), 14633987 (5), 19927120 (3), 19955178 (3) (see all 7)

    Search CenterWatch for drugs/clinical trials and news about TAB3 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for TAB3 gene (2 alternative transcripts): 
    NM_152787.3  NM_198312.1  

    Unigene Cluster for TAB3:

    TGF-beta activated kinase 1/MAP3K7 binding protein 3
    Hs.188256  [show with all ESTs]
    Unigene Representative Sequence: AL832071
    6 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000378933(uc004dcj.3 uc004dck.3 uc010ngl.3) ENST00000467136
    ENST00000378928 ENST00000378930 ENST00000288422 ENST00000378932

    miRNA
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    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat TAB3
    8/113 QIAGEN miScript miRNA Assays for microRNAs that regulate TAB3 (see all 113):
    hsa-miR-549 hsa-miR-520f hsa-miR-3607-3p hsa-miR-188-5p hsa-miR-199a-3p hsa-miR-15a hsa-miR-128 hsa-miR-30d
    SwitchGear 3'UTR luciferase reporter plasmidTAB3 3' UTR sequence
    Inhib. RNA
    Products:
         
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    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for TAB3 (see all 4)
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      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat TAB3
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat TAB3

    Additional cDNA sequence: 

    AK096786.1 AK297274.1 AL832071.1 AY371491.1 AY437560.1 BC032526.1 

    6 DOTS entries:

    DT.97806119  DT.97799162  DT.75130520  DT.101981398  DT.121304684  DT.86840948 

    24/71 AceView cDNA sequences (see all 71):

    AI419265 AY371491 AI421406 BG493286 AI733853 C00236 BX456736 AW518138 
    BP375414 AW148358 BQ025617 AI470410 CB163503 BU688642 BM450259 AY437560 
    BF939787 BM465254 BG166706 AI359882 BI092372 AW236264 AW614824 BE858609 

    GeneLoc Exon Structure

    2 Alternative Splicing Database (ASD) splice patterns (SP) for TAB3    About this scheme

    ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7
    SP1:                                          
    SP2:                          -               


    ECgene alternative splicing isoforms for TAB3

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    TAB3 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: CATCGTACCT

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See TAB3 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for TAB3

    SOURCE GeneReport for Unigene cluster: Hs.188256

    UniProtKB/Swiss-Prot: TAB3_HUMAN, Q8N5C8
    Tissue specificity: Widely expressed. Constitutively overexpressed in certain tumor tissues. Isoform 1 is a major
    transcript while isoform 2 is a minor transcript

        SABiosciences Custom PCR Arrays for TAB3
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    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for TAB3

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for TAB3 gene from 6/16 species (see all 16)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Tab31 , 5 TGF-beta activated kinase 1/MAP3K7 binding protein more1, 5 92.51(n)1
    95.22(a)1
      X (39.32 cM)5
    667241  NM_025729.41  NP_080005.21 
     855740225 
    chicken
    (Gallus gallus)
    Aves TAB31 TGF-beta activated kinase 1/MAP3K7 binding protein more 83.88(n)
    87.65(a)
      418588  XM_416787.3  XP_416787.3 
    lizard
    (Anolis carolinensis)
    Reptilia TAB36
    --
    80(a)
    1 ↔ 1
    3(129014162-129042083)
    African clawed frog
    (Xenopus laevis)
    Amphibia AF549911.12   -- 77.34(n)    AF549911.1 
    zebrafish
    (Danio rerio)
    Actinopterygii Dr.112502 Transcribed sequence with weak similarity to protein more 76.19(n)    57096212 
    fruit fly
    (Drosophila melanogaster)
    Insecta Tab26
    TAK1-associated binding protein 2
    15(a)
    1 → many
    2R(15180034-15192013)


    ENSEMBL Gene Tree for TAB3 (if available)
    TreeFam Gene Tree for TAB3 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for TAB3 gene
    TAB22  
    2 SIMAP similar genes for TAB3 using alignment to 3 protein entries:     TAB3_HUMAN (see all proteins):
    DKFZp313L0918    TAB2

    TAB3 for paralogs           About GeneDecksing


    1 Pseudogenes.org Pseudogene for TAB3
    PGOHUM00000261825


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/699 NCBI SNPs in TAB3 are shown (see all 699    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr X posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1813063611,2
    --30845086(+) GATTAA/CAAGCA 1 -- ds50010--------
    rs1866533731,2
    --30845266(+) TTTTTA/TAAAAA 1 -- ds50010--------
    rs1917162631,2
    --30845431(+) ATTACA/GTGTTC 1 -- ds50010--------
    rs1834806361,2
    --30845950(+) AAATAA/GTACAG 1 -- ut310--------
    rs1872041091,2
    --30846196(+) ATTCAA/GTTTTT 1 -- ut310--------
    rs1912179991,2
    --30846493(+) TTTCTC/TCCAGG 1 -- ut310--------
    rs1476530981,2
    --30846742(+) GCAAAC/TGTGCT 1 -- ut310--------
    rs1822652641,2
    --30846743(+) CAAACG/TTGCTT 1 -- ut310--------
    rs169891941,2
    C,F,H,--30846903(+) CAGGCA/GTCATC 1 -- ut31 ese315Minor allele frequency- G:0.91NA NS EA 1946
    rs413052151,2
    C,--30846929(+) CACTTA/CCATGC 1 -- ut310--------

    HapMap Linkage Disequilibrium report for TAB3 (30845559 - 30993201 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 1 variation for TAB3
         1 CNV: 3265
    Locus Specific Mutation Databases (LSDB): TAB3

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    TAB3 for disorders           About GeneDecksing

    OMIM gene information: 300480    OMIM disorders: --

    2 diseases for TAB3:    About MalaCards
    gonadal dysgenesis    breast cancer

    2 Novoseek disease relationships for TAB3 gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    necrosis 44.7 3 14766965 (2), 18021073 (1)
    tumors 13.3 2 14766965 (2)


    Export disorders for TAB3 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for TAB3 gene, integrated from 9 sources (see all 37):
    (articles sorted by number of sources associating them with TAB3)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. TAB3, a new binding partner of the protein kinase TAK1. (PubMed id 14670075)1, 2, 3, 9 Cheung P.C.... Cohen P. (2004)
    2. Role of the TAB2-related protein TAB3 in IL-1 and TNF signaling. (PubMed id 14633987)1, 2, 3, 9 Ishitani T....Matsumoto K. (2003)
    3. Identification of a human NF-kappaB-activating protein, TAB3. (PubMed id 14766965)1, 2, 9 Jin G.... Sherf B. (2004)
    4. Roles for TAB1 in regulating the IL-1-dependent phosphorylation of the TAB3 regulatory subunit and activity of the TAK1 complex. (PubMed id 18021073)1, 2, 9 Mendoza H....Cohen P. (2008)
    5. RBCK1 negatively regulates tumor necrosis factor- and interleukin-1-triggered NF-kappaB activation by targeting TAB2/3 for degradation. (PubMed id 17449468)1, 2, 9 Tian Y....Shu H.B. (2007)
    6. TRIM5 is an innate immune sensor for the retrovirus c apsid lattice. (PubMed id 21512573)1, 2 Pertel T....Luban J. (2011)
    7. WDR34 is a novel TAK1-associated suppressor of the IL -1R/TLR3/TLR4-induced NF-kappaB activation pathway. (PubMed id 19521662)1, 2 Gao D....Chen D.Y. (2009)
    8. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    9. Structural basis for specific recognition of Lys 63-l inked polyubiquitin chains by NZF domains of TAB2 and TAB3. (PubMed id 19927120)1, 9 Sato Y....Fukai S. (2009)
    10. TAK1-dependent signaling requires functional interaction with TAB2/TAB3. (PubMed id 17158449)1, 9 Besse A....Darnay B.G. (2007)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 257397 HGNC: 30681 AceView: TAB3 Ensembl:ENSG00000157625 euGenes: HUgn257397
    ECgene: TAB3 Kegg: 257397 H-InvDB: TAB3

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for TAB3 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for TAB3 gene:
    Search GeneIP for patents involving TAB3

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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    GeneCards Homepage - Last full update: 18 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013

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