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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

TAB1 Gene

protein-coding   GIFtS: 60
GCID: GC22P039796

TGF-beta activated kinase 1/MAP3K7 binding protein 1

(Previous name: mitogen-activated protein kinase kinase kinase 7 interacting...)
(Previous symbol: MAP3K7IP1)
 Explore 16 diseases affiliated with
TAB1 via our new
 Human Malady Compendium 
Biological research products
for TAB1
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
TGF-Beta Activated Kinase 1/MAP3K7 Binding Protein 11 2     3'-Tab12
MAP3K7IP11 2 3 5     TGF-Beta-Activated Kinase 1 And MAP3K7-Binding Protein 12
Mitogen-Activated Protein Kinase Kinase Kinase 7-Interacting Protein 12 3     Transforming Growth Factor Beta-Activated Kinase-Binding Protein 12
TAK1-Binding Protein 12 3     TGF-Beta-Activated Kinase 1-Binding Protein 13
Mitogen-Activated Protein Kinase Kinase Kinase 7 Interacting Protein 11     

External Ids:    HGNC: 181571   Entrez Gene: 104542   Ensembl: ENSG000001003247   OMIM: 6026155   UniProtKB: Q157503   

Export aliases for TAB1 gene to outside databases

Previous GC identifer: GC22P022760


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for TAB1:
The protein encoded by this gene was identified as a regulator of the MAP kinase kinase kinase MAP3K7/TAK1, which is
known to mediate various intracellular signaling pathways, such as those induced by TGF beta, interleukin 1, and
WNT-1. This protein interacts and thus activates TAK1 kinase. It has been shown that the C-terminal portion of this
protein is sufficient for binding and activation of TAK1, while a portion of the N-terminus acts as a
dominant-negative inhibitor of TGF beta, suggesting that this protein may function as a mediator between TGF beta
receptors and TAK1. This protein can also interact with and activate the mitogen-activated protein kinase 14
(MAPK14/p38alpha), and thus represents an alternative activation pathway, in addition to the MAPKK pathways, which
contributes to the biological responses of MAPK14 to various stimuli. Alternatively spliced transcript variants
encoding distinct isoforms have been reported. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: TAB1_HUMAN, Q15750
Function: May be an important signaling intermediate between TGFB receptors and MAP3K7/TAK1. May play an important role
in mammalian embryogenesis

Gene Wiki entry for TAB1 (MAP3K7IP1)


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000022.10  NC_018933.1  NT_011520.12  
Regulatory elements:
   Search SABiosciences Regulatory transcription factor binding sites for TAB1
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidTAB1 promoter sequence
   Search SABiosciences Chromatin IP Primers for TAB1

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat TAB1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 22q13.1   Ensembl cytogenetic band:  22q13.1   HGNC cytogenetic band: 22q13.1

TAB1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
TAB1 gene location

GeneLoc information about chromosome 22         GeneLoc Exon Structure

GeneLoc location for GC22P039796:  view genomic region     (about GC identifiers)

Start:
39,795,746 bp from pter      End:
39,913,596 bp from pter
Size:
117,851 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: TAB1_HUMAN, Q15750 (See protein sequence)
Recommended Name: TGF-beta-activated kinase 1 and MAP3K7-binding protein 1  
Size: 504 amino acids; 54644 Da
Subunit: Interacts with XIAP and BIRC7. Interacts with TRAF6 and MAP3K7; during IL-1 signaling. Identified in the
TRIKA2 complex composed of MAP3K7, TAB1 and TAB2
Caution: Lacks several key residues involved in metal-binding and catalytic activity, therefore has lost phosphatase
activity
6/7 PDB 3D structures from and Proteopedia for TAB1 (see all 7):
2J4O (3D)        2POM (3D)        2POP (3D)        2YIY (3D)        4AY5 (3D)        4AY6 (3D)    
Secondary accessions: Q2PP09 Q8IZW2
Alternative splicing: 2 isoforms:  Q15750-1   Q15750-2   (Does not bind nor activate MAP3K7/TAK1)

Explore the universe of human proteins at neXtProt for TAB1: NX_Q15750

Post-translational modifications:

  • Monoubiquitinated. Deubiquitinated by Y.enterocolitica YopP1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q15750

  • TAB1 Protein expression data from MOPED and PaxDb:    About this image 
    TAB1 Protein Expression
    REFSEQ proteins (2 alternative transcripts): 
    NP_006107.1  NP_705717.1  

    ENSEMBL proteins: 
     ENSP00000216160   ENSP00000333049   ENSP00000417054   ENSP00000418850  
    Reactome Protein details: Q15750
    Human Recombinant Protein Products for TAB1: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
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    OriGene Purified Protein: TAB1
    OriGene Protein Over-expression Lysate: TAB1
    OriGene Custom Protein Services for TAB1 
    GenScript Custom Purified and Recombinant Proteins Services for TAB1
    Novus Biologicals TAB1 Proteins
    Novus Biologicals TAB1 Lysates
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for TAB1

    Gene Ontology (GO): 3 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005829cytosol TAS--
    GO:0010008endosome membrane TAS--
    GO:0043234protein complex ----

    TAB1 for ontologies           About GeneDecksing



    TAB1 Antibody Products: 
    EMD Millipore Mono- and Polyclonal Antibodies for the study of TAB1
    R&D Systems Antibodies for TAB1
    Cell Signaling Technology (CST) Antibodies for TAB1 
    OriGene Antibodies (see all 2): TAB1
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    GenScript Custom Superior Antibodies Services for TAB1
    Novus Biologicals TAB1 Antibodies
    Abcam antibodies for TAB1 
    Uscn Antibodies for TAB1
    ThermoFisher Antibody for TAB1

    Assay Products for TAB1: 
    Browse Kits and Assays available from EMD Millipore
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    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for TAB1
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for TAB1


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    TAB1 for domains           About GeneDecksing

    2 InterPro domains/families:
     IPR001932 PP2C-like
     IPR015655 Protein_Pase_2C

    Graphical View of Domain Structure for InterPro Entry Q15750

    ProtoNet protein and cluster: Q15750

    UniProtKB/Swiss-Prot: TAB1_HUMAN, Q15750
    Similarity: Contains 1 PP2C-like domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: TAB1_HUMAN, Q15750
    Function: May be an important signaling intermediate between TGFB receptors and MAP3K7/TAK1. May play an important role
    in mammalian embryogenesis

         Genatlas biochemistry entry for TAB1:
    transforming growth factor beta activated kinase (TAK)-binding protein 1,widely expressed,involved in the BMP signaling
    through binding with API3 (XIAP)

         Gene Ontology (GO): 4 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003824catalytic activity IEA--
    GO:0005515protein binding IPI10094049
    GO:0008047enzyme activator activity TAS8638164
    GO:0019209kinase activator activity IEA--
         
    TAB1 for ontologies           About GeneDecksing


    Phenotypes:
         2 GenomeRNAi human phenotypes for TAB1:
     Downregulation of NF-kappaB pa  Downregulation of NF-kappaB pa 

         8 MGI mutant phenotypes (inferred from 3 alleles(MGI details for Tab1):
     cardiovascular system  cellular  homeostasis/metabolism  mortality/aging  muscle 
     normal  respiratory system  skeleton 

    TAB1 for phenotypes           About GeneDecksing

    Animal Models:
         Mouse knock-outs for TAB1: Tab1tm1.1Mis Tab1tm1Geny
       inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for TAB1 

    miRNA
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    OriGene 3'-UTR Clone (see all 2): TAB1
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat TAB1
    7 QIAGEN miScript miRNA Assays for microRNAs that regulate TAB1:
    hsa-miR-622 hsa-miR-3118 hsa-miR-134 hsa-miR-516a-3p hsa-miR-516b* hsa-miR-518f* hsa-miR-758
    SwitchGear 3'UTR luciferase reporter plasmidTAB1 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for TAB1 (see all 4)
    OriGene shRNA RFP: TAB1
    OriGene siRNA: TAB1
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat TAB1
    Sirion Biotech Custom design and validation of potent shRNA sequences against TAB1 

    Gene Editing
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    Sirion Biotech Customized adenovirus for overexpression of TAB1 
    Sirion Biotech Customized adenovirus for potent knockdown of TAB1

    Clone
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    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for TAB1 (see all 4)
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    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector (see all 2): TAB1 (NM_153497)
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    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat TAB1 

    Cell Line
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    Sirion Biotech Customized inducible overexpressing cell line services for TAB1

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for TAB1


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/32 super-pathways (see all 32About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1TRAF6 Mediated Induction of proinflammatory cytokines
    8/19 pathways (see all 19)
    TRAF6 Mediated Induction of proinflammatory cytokines1.00
    Toll Like Receptor TLR1:TLR2 Cascade0.78
    MAP kinase activation in TLR cascade0.88
    Toll Like Receptor 2 (TLR2) Cascade0.78
    Toll Like Receptor 5 (TLR5) Cascade0.86
    MyD88:Mal cascade initiated on plasma membrane0.78
    Toll Like Receptor 10 (TLR10) Cascade0.86
    TRIF-mediated TLR3/TLR4 signaling 0.73
    2JNK (c-Jun kinases) phosphorylation and activation mediated by activated human TAK1
    JNK (c-Jun kinases) phosphorylation and activation mediated by activated human TAK11.00
    activated TAK1 mediates p38 MAPK activation0.58
    TAK1 is activated0.60
    TAK1 activates NFkB by phosphorylation and activation of IKKs complex0.56
    3Development_CNTF receptor signaling
    Translation _Regulation of EIF4F activity0.32
    Cell adhesion Plasmin signaling0.07
    Translation Regulation activity of EIF4F0.32
    Cell adhesion_Plasmin signaling0.07
    4Immune response_Bacterial infections in normal airways
    Immune response_Bacterial infections in normal airways1.00
    IL-1 beta-dependent CFTR expression0.43
    Bacterial infections in CF airways0.78
    5Nucleotide-binding domain, leucine rich repeat containing receptor (NLR) signaling pathways
    Nucleotide-binding domain, leucine rich repeat containing receptor (NLR) signaling pathways1.00
    NOD-like receptor signaling pathway0.36
    NOD1/2 Signaling Pathway0.69

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    5/6 EMD Millipore Pathways for TAB1 (see all 6)
        Immune response Toll-like receptor (TLR) ligands and common TLR signaling pathway leading to cell proinflammatory response
    Immune response MIF in innate immunity response
    Development TGF-beta receptor signaling
    Immune response IL-1 signaling pathway
    Translation Regulation activity of EIF4F

    1 R&D Systems Pathway for TAB1
        Toll-Like receptor Signaling Pathways


    3 Cell Signaling Technology (CST) Pathways for TAB1
        MAP Kinase Signaling
    TGF-beta/Smad Signaling
    NF-kappaB Signaling

    5/10 GeneGo (Thomson Reuters) Pathways for TAB1 (see all 10)
        Immune response Bacterial infections in normal airways
    Immune response MIF in innate immunity response
    Immune response TLR signaling pathways
    Bacterial infections in CF airways
    Development TGF-beta receptor signaling

    5/12 BioSystems Pathways for TAB1 (see all 12
        Integrated Breast Cancer Pathway
    MicroRNAs in cardiomyocyte hypertrophy
    MAPK signaling pathway
    TNF-alpha/NF-kB Signaling Pathway
    Toll-like receptor signaling pathway

    5/34        Reactome Pathways for TAB1 (see all 34)
        TAK1 is activated within the TAK1 complex
    Toll Like Receptor 2 (TLR2) Cascade
    Toll Like Receptor TLR6:TLR2 Cascade
    IRAK2 mediated activation of TAK1 complex
    TAK1 activates NFkB by phosphorylation and activation of IKKs complex


    5/6         Kegg Pathways  (Kegg details for TAB1) (see all 6):
        MAPK signaling pathway
    Osteoclast differentiation
    Toll-like receptor signaling pathway
    NOD-like receptor signaling pathway
    Leishmaniasis


    TAB1 for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for TAB1

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/185 Interacting proteins for TAB1 (Q157502, 3 ENSP000002161604) via UniProtKB, MINT, STRING, and/or I2D (see all 185)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    MAP3K7O433182, 3, ENSP000003583354MINT-6797194 MINT-49229 MINT-49178 MINT-6797216 MINT-2842623 MINT-48034 I2D: score=6 STRING: ENSP00000358335
    CALM2P621582, 3MINT-49173 I2D: score=2 
    CALM3P621582, 3MINT-49173 I2D: score=2 
    HSP90AB1P082382, 3, ENSP000003258754MINT-6489217 MINT-49181 I2D: score=2 STRING: ENSP00000325875
    HSPA9P386462, 3, ENSP000002971854MINT-6489217 MINT-49164 I2D: score=2 STRING: ENSP00000297185
    About this table

    Gene Ontology (GO): 5/23 biological process terms (GO ID links to tree view) (see all 23):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000185activation of MAPKKK activity IEA--
    GO:0000187activation of MAPK activity TAS--
    GO:0001701in utero embryonic development IEA--
    GO:0002224toll-like receptor signaling pathway TAS--
    GO:0002755MyD88-dependent toll-like receptor signaling pathway TAS--

    TAB1 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    TAB1 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for TAB1
    3 Novoseek chemical compound relationships for TAB1 gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    tab-1 99.5 184 17205106 (10), 12429732 (8), 17932218 (7), 17052891 (6) (see all 51)
    tab-2 96.6 20 16845370 (3), 15590691 (3), 14670075 (2), 11518704 (2) (see all 12)
    sb 203580 52.9 1 17932218 (1)

    Search CenterWatch for drugs/clinical trials and news about TAB1 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for TAB1 gene (2 alternative transcripts): 
    NM_006116.2  NM_153497.2  

    Unigene Cluster for TAB1:

    TGF-beta activated kinase 1/MAP3K7 binding protein 1
    Hs.507681  [show with all ESTs]
    Unigene Representative Sequence: BC038582
    9 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000216160(uc003axr.3 uc003axt.3 uc011aok.2) ENST00000473613
    ENST00000331454(uc003axu.1) ENST00000461775 ENST00000462277 ENST00000480990
    ENST00000490819 ENST00000473491 ENST00000488859(uc021wpx.1)

    miRNA
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    hsa-miR-622 hsa-miR-3118 hsa-miR-134 hsa-miR-516a-3p hsa-miR-516b* hsa-miR-518f* hsa-miR-758
    SwitchGear 3'UTR luciferase reporter plasmidTAB1 3' UTR sequence
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    Sirion Biotech Custom design and validation of potent shRNA sequences against TAB1 
    Clone
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    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat TAB1 
    Primer
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      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat TAB1
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat TAB1

    Additional cDNA sequence: 

    AF425640.1 AK291668.1 AK296314.1 AK308903.1 AK312456.1 AK316004.1 BC038582.1 BC050554.1 
    EF036484.1 U49928.1 

    13 DOTS entries:

    DT.416823  DT.100024651  DT.100841680  DT.97779153  DT.100841682  DT.100032803  DT.100841688  DT.100694188 
    DT.120645251  DT.91985224  DT.99966152  DT.100714323  DT.97805216 

    24/230 AceView cDNA sequences (see all 230):

    BQ929862 H45303 AA744944 BC050554 BQ917606 BU624204 AA458466 BX375824 
    AW613952 AA253016 BE018709 CF125613 BC038582 BX324983 BX396811 AA555204 
    BQ644850 BM752202 AA806471 CD622011 AY007145 BM699054 AL110379 BX328210 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    TAB1 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: GGCCTCTTCT
    TAB1 Expression
    About this image
    See TAB1 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for TAB1

    SOURCE GeneReport for Unigene cluster: Hs.507681

    UniProtKB/Swiss-Prot: TAB1_HUMAN, Q15750
    Tissue specificity: Ubiquitous

        SABiosciences Expression via Pathway-Focused PCR Arrays including TAB1: 
              Toll-Like Receptor Signaling Pathway in human mouse rat
              Inflammasomes in human mouse rat

    Primer
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    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat TAB1
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for TAB1

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for TAB1 gene from 7/18 species (see all 18)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Tab11 , 5 TGF-beta activated kinase 1/MAP3K7 binding protein 1 less1, 5 88.71(n)1
    97.61(a)1
      15 (37.85 cM)5
    665131  NM_025609.21  NP_079885.21 
     801331545 
    chicken
    (Gallus gallus)
    Aves TAB11 TGF-beta activated kinase 1/MAP3K7 binding protein 1 less 80.09(n)
    89.02(a)
      418014  NM_001006240.1  NP_001006240.1 
    lizard
    (Anolis carolinensis)
    Reptilia TAB16
    --
    89(a)
    1 ↔ 1
    5(24706949-24725150)
    African clawed frog
    (Xenopus laevis)
    Amphibia LOC3980252 TAB1 75.37(n)    U92031.1 
    zebrafish
    (Danio rerio)
    Actinopterygii Dr.167542 Danio rerio TAK1-binding protein 1, mRNA (cDNA clone IMAGE6790544) less 75.47(n)    BC058295.1 
    mosquito
    (Anopheles gambiae)
    Insecta AgaP_AGAP0029531 AGAP002953-PA 48.34(n)
    40.6(a)
      1273010  XM_311946.4  XP_311946.4 
    worm
    (Caenorhabditis elegans)
    Secernentea tap-16
    TAK1 kinase/MOM-4 binding Protein family member (t...
    23(a)
    1 ↔ 1
    X(14589567-14591894)


    ENSEMBL Gene Tree for TAB1 (if available)
    TreeFam Gene Tree for TAB1 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
      --

    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/793 NCBI SNPs in TAB1 are shown (see all 793    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 22 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs43848861,2
    C,F,H--39793766(+) TCAGGT/CGTTTG 2 -- us2k111Minor allele frequency- C:0.19WA NA CSA EA 374
    rs1385700841,2
    --39793809(+) CTCTAA/CAAGAA 2 -- us2k10--------
    rs1174334491,2
    F--39793874(+) ACTGAG/AGTGGG 2 -- us2k11Minor allele frequency- A:0.04EA 120
    rs1417594451,2
    --39793900(+) CAGAAA/GCTTGA 2 -- us2k10--------
    rs1158118401,2
    --39793939(+) GCACTC/GCAGCC 2 -- us2k11Minor allele frequency- G:0.01WA 118
    rs57576531,2
    C,F,A,H--39794071(+) GCTCAC/TGCCTG 2 -- us2k12Minor allele frequency- T:0.47NA EA 240
    rs57576541,2
    C,F,A,H--39794124(+) AGGTCA/GGGAGT 2 -- us2k1 tfbs33Minor allele frequency- G:0.33NA CSA 6
    rs72920661,2
    C,F,A,H--39794241(+) GGCAGA/GAGAAT 2 -- us2k17Minor allele frequency- G:0.29WA NA CSA 14
    rs1119413681,2
    C--39794249(+) AATCGC/TTTGAA 2 -- us2k11Minor allele frequency- T:0.50WA 2
    rs1142245831,2
    F--39794433(+) GCTCCC/TGTGAC 2 -- us2k11Minor allele frequency- T:0.02WA 118

    HapMap Linkage Disequilibrium report for TAB1 (39795746 - 39913596 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for TAB1: --

    SABiosciences Cancer Mutation PCR Assays
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    DNA2.0 Custom Variant and Variant Library Synthesis for TAB1

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    TAB1 for disorders           About GeneDecksing

    OMIM gene information: 602615    OMIM disorders: --

    16 diseases for TAB1:    About MalaCards
    primary biliary cirrhosis    metastasis efficiency    kaposi's sarcoma    kawasaki disease
    embryonal carcinoma    rheumatoid arthritis    toxoplasmosis    crohn's disease
    leishmaniasis    breast cancer    sarcoma    arthritis
    prostate cancer    ischemia    prostatitis    carcinoma

    3 Novoseek disease relationships for TAB1 gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    necrosis 39.2 2 12488458 (1), 18566231 (1)
    tumors 10.1 1 18566231 (1)
    breast cancer 7.5 2 18316610 (2)

    Human Genome Epidemiology (HuGE) Navigator: TAB1 (3 documents)

    Export disorders for TAB1 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for TAB1 gene, integrated from 9 sources (see all 110):
    (articles sorted by number of sources associating them with TAB1)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. TAB1: an activator of the TAK1 MAPKKK in TGF-beta signal transduction. (PubMed id 8638164)1, 2, 3, 9 Shibuya H.... Matsumoto K. (1996)
    2. TAB1beta (transforming growth factor-beta-activated protein kinase 1- binding protein 1beta ), a novel splicing variant of TAB1 that interacts with p38alpha but not TAK1. (PubMed id 12429732)1, 2, 9 Ge B....Han J. (2003)
    3. TAK1-binding protein 1 is a pseudophosphatase. (PubMed id 16879102)1, 2, 9 Conner S.H....Van Aalten D.M. (2006)
    4. Functional interactions of transforming growth factor beta-activated kinase 1 with IkappaB kinases to stimulate NF-kappaB activation . (PubMed id 10187861)1, 3, 9 Sakurai H....Sugita T. (1999)
    5. TAK1 is a ubiquitin-dependent kinase of MKK and IKK. (PubMed id 11460167)1, 2, 9 Wang C.... Chen Z.J. (2001)
    6. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    7. The DNA sequence of human chromosome 22. (PubMed id 10591208)1, 2 Dunham I....O'Brien K.P. (1999)
    8. The kinase TAK1 can activate the NIK-I kappaB as well as the MAP kinase cascade in the IL-1 signalling pathway. (PubMed id 10094049)1, 2 Ninomiya-Tsuji J....Matsumoto K. (1999)
    9. Determinants that control the specific interactions between TAB1 and p38alpha. (PubMed id 16648477)1, 9 Zhou H....Han J. (2006)
    10. The Yersinia enterocolitica effector YopP inhibits host cell signalling by inactivating the protein kinase TAK1 in the IL-1 signalling pathway. (PubMed id 16845370)2, 9 Thiefes A....Kracht M. (2006)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 10454 HGNC: 18157 AceView: MAP3K7IP1 Ensembl:ENSG00000100324 euGenes: HUgn10454
    ECgene: TAB1 Kegg: 10454 H-InvDB: TAB1

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for TAB1 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for TAB1 gene:
    Search GeneIP for patents involving TAB1

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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    About This Section

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