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Aliases for SZT2-AS1 Gene

Subcategory (RNA class) for SZT2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for SZT2-AS1 Gene

  • SZT2 Antisense RNA 1 2 3 5
  • SZT2 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for SZT2-AS1 Gene

Previous GeneCards Identifiers for SZT2-AS1 Gene

  • GC00U933393
  • GC01M043914

Summaries for SZT2-AS1 Gene

GeneCards Summary for SZT2-AS1 Gene

SZT2-AS1 (SZT2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for SZT2-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SZT2-AS1 Gene

Genomics for SZT2-AS1 Gene

Regulatory Elements for SZT2-AS1 Gene

Enhancers for SZT2-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H043705 1.1 ENCODE 10.3 -259.0 -258951 3 HDGF FOXA2 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9 SZT2 DMAP1 KDM4A P3H1 HYI MED8 ARTN ZNF691 KDM4A-AS1 SZT2-AS1
GH01H043404 1 ENCODE 11 +43.2 43235 1 ATF1 ARNT TCF12 ZNF766 GATA2 ELK1 ATF7 NCOA1 SMARCB1 SNIP1 MED8 SZT2 HYI PPIH P3H1 ENSG00000229431 ELOVL1 CDC20 LOC105378687 KDM4A-AS1
GH01H043239 0.9 Ensembl 11 +210.1 210144 0 ELF3 THRB RAD21 RARA YY1 SLC30A9 ZNF143 SP5 MXD4 REST TMEM125 ELOVL1 CDC20 LOC105378687 ENSG00000229431 MED8 SZT2 HYI-AS1 HYI SZT2-AS1
GH01H043414 0.8 ENCODE 11.2 +33.8 33820 0 CTCF RB1 JUN RAD21 RELA FOSL1 CC2D1A CTBP1 POLR2A SMC3 ELOVL1 LOC105378687 CDC20 SZT2 SZT2-AS1 HYI-AS1 HYI PTPRF ENSG00000229431 MED8
GH01H043240 0.7 ENCODE 11 +209.1 209060 1 HDGF PKNOX1 ELF1 EBF1 DPF2 BCL11A IKZF1 NBN ZNF24 MLLT1 TMEM125 ELOVL1 CDC20 LOC105378687 MPL ENSG00000229431 MED8 SZT2 HYI SZT2-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SZT2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for SZT2-AS1 Gene

Chromosome:
1
Start:
43,447,776 bp from pter
End:
43,448,644 bp from pter
Size:
869 bases
Orientation:
Minus strand

Genomic View for SZT2-AS1 Gene

Genes around SZT2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SZT2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SZT2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for SZT2-AS1 Gene

Proteins for SZT2-AS1 Gene

Post-translational modifications for SZT2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SZT2-AS1 Gene

Domains & Families for SZT2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SZT2-AS1 Gene

Function for SZT2-AS1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for SZT2-AS1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SZT2-AS1 Gene

Localization for SZT2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SZT2-AS1 Gene

Pathways & Interactions for SZT2-AS1 Gene

SuperPathways for SZT2-AS1 Gene

No Data Available

Interacting Proteins for SZT2-AS1 Gene

Gene Ontology (GO) - Biological Process for SZT2-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SZT2-AS1 Gene

Drugs & Compounds for SZT2-AS1 Gene

No Compound Related Data Available

Transcripts for SZT2-AS1 Gene

mRNA/cDNA for SZT2-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for SZT2-AS1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for SZT2-AS1 Gene

No ASD Table

Relevant External Links for SZT2-AS1 Gene

GeneLoc Exon Structure for
SZT2-AS1
ECgene alternative splicing isoforms for
SZT2-AS1

Expression for SZT2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SZT2-AS1 Gene

genes like me logo Genes that share expression patterns with SZT2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SZT2-AS1 Gene

Orthologs for SZT2-AS1 Gene

Evolution for SZT2-AS1 Gene

ENSEMBL:
Gene Tree for SZT2-AS1 (if available)
TreeFam:
Gene Tree for SZT2-AS1 (if available)

No data available for Orthologs for SZT2-AS1 Gene

Paralogs for SZT2-AS1 Gene

No data available for Paralogs for SZT2-AS1 Gene

Variants for SZT2-AS1 Gene

Relevant External Links for SZT2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SZT2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SZT2-AS1 Gene

Disorders for SZT2-AS1 Gene

Relevant External Links for SZT2-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SZT2-AS1

No disorders were found for SZT2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SZT2-AS1 Gene

Publications for SZT2-AS1 Gene

No publications were found for SZT2-AS1 Gene.

Products for SZT2-AS1 Gene

Sources for SZT2-AS1 Gene

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