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Aliases for SZT2-AS1 Gene

Subcategory (RNA class) for SZT2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for SZT2-AS1 Gene

  • SZT2 Antisense RNA 1 2 3 5
  • SZT2 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for SZT2-AS1 Gene

Previous GeneCards Identifiers for SZT2-AS1 Gene

  • GC00U933393
  • GC01M043914

Summaries for SZT2-AS1 Gene

GeneCards Summary for SZT2-AS1 Gene

SZT2-AS1 (SZT2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SZT2-AS1 Gene

Genomics for SZT2-AS1 Gene

Regulatory Elements for SZT2-AS1 Gene

Enhancers for SZT2-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F043238 1.1 Ensembl ENCODE 11 +210.2 210244 0.8 ELF3 ARID4B THRB ZNF48 RAD21 YY1 RARA SLC30A9 ZNF143 MIXL1 TMEM125 MIR6734 ELOVL1 CDC20 LOC105378687 ENSG00000229431 MED8 SZT2 HYI HYI-AS1
GH01F043404 0.9 ENCODE 11 +43.2 43235 1.1 HDAC1 ATF1 TBL1XR1 NFXL1 GATA2 SIRT6 CREM ZNF263 ZBTB11 NCOA1 MED8 HYI DMAP1 ENSG00000229431 ELOVL1 MIR6734 CDC20 LOC105378687 SZT2 KDM4A
GH01F043239 0.9 Ensembl ENCODE 11 +209.1 209060 1.1 HDGF CTCF PKNOX1 MTA2 TBX21 ZFHX2 POLR2A IKZF1 KLF9 NBN TMEM125 CDC20 LOC105378687 MIR6734 ELOVL1 MPL ENSG00000229431 MED8 SZT2 HYI
GH01F043414 0.8 ENCODE 11.1 +33.8 33820 0.1 CTCF CBX3 JUN RAD21 SMC3 NR2F6 ZNF654 NR2F1 ZBTB8A REST ELOVL1 MIR6734 CDC20 LOC105378687 SZT2 SZT2-AS1 HYI-AS1 HYI PTPRF ENSG00000229431
GH01F043422 0.6 ENCODE 12.1 +24.8 24846 1.9 KLF1 KLF17 KLF9 KLF7 ZBTB33 KLF8 MED8 HYI SZT2-AS1 HYI-AS1 SZT2 GC01M043435
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SZT2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for SZT2-AS1 Gene

Chromosome:
1
Start:
43,447,776 bp from pter
End:
43,448,644 bp from pter
Size:
869 bases
Orientation:
Minus strand

Genomic View for SZT2-AS1 Gene

Genes around SZT2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SZT2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SZT2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for SZT2-AS1 Gene

Proteins for SZT2-AS1 Gene

Post-translational modifications for SZT2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SZT2-AS1 Gene

Domains & Families for SZT2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SZT2-AS1 Gene

Function for SZT2-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SZT2-AS1 Gene

Localization for SZT2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SZT2-AS1 Gene

Pathways & Interactions for SZT2-AS1 Gene

SuperPathways for SZT2-AS1 Gene

No Data Available

Interacting Proteins for SZT2-AS1 Gene

Gene Ontology (GO) - Biological Process for SZT2-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SZT2-AS1 Gene

Transcripts for SZT2-AS1 Gene

mRNA/cDNA for SZT2-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SZT2-AS1 Gene

No ASD Table

Relevant External Links for SZT2-AS1 Gene

GeneLoc Exon Structure for
SZT2-AS1
ECgene alternative splicing isoforms for
SZT2-AS1

Expression for SZT2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SZT2-AS1 Gene

genes like me logo Genes that share expression patterns with SZT2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SZT2-AS1 Gene

Orthologs for SZT2-AS1 Gene

Evolution for SZT2-AS1 Gene

ENSEMBL:
Gene Tree for SZT2-AS1 (if available)
TreeFam:
Gene Tree for SZT2-AS1 (if available)

No data available for Orthologs for SZT2-AS1 Gene

Paralogs for SZT2-AS1 Gene

No data available for Paralogs for SZT2-AS1 Gene

Variants for SZT2-AS1 Gene

Relevant External Links for SZT2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SZT2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SZT2-AS1 Gene

Disorders for SZT2-AS1 Gene

No disorders were found for SZT2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SZT2-AS1 Gene

Publications for SZT2-AS1 Gene

No publications were found for SZT2-AS1 Gene.

Products for SZT2-AS1 Gene

Sources for SZT2-AS1 Gene

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