Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

SYT7 Gene

protein-coding   GIFtS: 54
GCID: GC11M061282

synaptotagmin VII

(Previous name: prostate cancer associated protein 7 )
(Previous symbol: PCANAP7)
 Explore 8 diseases affiliated with
SYT7 via our new
 Human Malady Compendium 
Biological research products
for SYT7
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Synaptotagmin VII1 2 3     Prostate Cancer Associated Protein 71
IPCA-71 2 3     IPCA72
PCANAP71 2 3     SYTVII2
SYT-VII1 2     Synaptotagmin-71
Prostate Cancer-Associated Protein 72 3     SytVII3
MGC1505171     

External Ids:    HGNC: 115141   Entrez Gene: 90662   Ensembl: ENSG000000113477   OMIM: 6041465   UniProtKB: O435813   

Export aliases for SYT7 gene to outside databases

Previous GC identifers: GC11U990180 GC11M062798 GC11M061536 GC11M061060 GC11M061058 GC11M061039 GC11M057610


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for SYT7:
This gene is a member of the synaptotagmin gene family and encodes a protein similar to other family members that
mediate calcium-dependent regulation of membrane trafficking in synaptic transmission. A similar protein in rodents
mediates hormone secretion and lysosome exocytosis. In humans, expression of this gene has been associated with
prostate cancer. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this
gene. (provided by RefSeq, Oct 2011)

UniProtKB/Swiss-Prot: SYT7_HUMAN, O43581
Function: May be involved in Ca(2+)-dependent exocytosis of secretory vesicles through Ca(2+) and phospholipid binding
to the C2 domain or may serve as Ca(2+) sensors in the process of vesicular trafficking and exocytosis (By similarity)

Gene Wiki entry for SYT7


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000011.9  NC_018922.1  NT_167190.1  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the SYT7 gene promoter:
         c-Fos   AP-1   ATF-2   c-Jun   NRSF form 2   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidSYT7 promoter sequence
   Search SABiosciences Chromatin IP Primers for SYT7

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat SYT7


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 11q12-q13.1   Ensembl cytogenetic band:  11q12.2   HGNC cytogenetic band: 11q12-q13.1

SYT7 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
SYT7 gene location

GeneLoc information about chromosome 11         GeneLoc Exon Structure

GeneLoc location for GC11M061282:  view genomic region     (about GC identifiers)

Start:
61,282,785 bp from pter      End:
61,348,620 bp from pter
Size:
65,836 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: SYT7_HUMAN, O43581 (See protein sequence)
Recommended Name: Synaptotagmin-7  
Size: 403 amino acids; 45501 Da
Cofactor: Binds 3 calcium ions per subunit. The ions are bound to the C2 domains (By similarity)
Subunit: Interacts with SYNCRIP isoform 3 C-terminus (By similarity)
Subcellular location: Cytoplasmic vesicle, secretory vesicle, synaptic vesicle membrane; Single-pass membrane protein
(By similarity)
Sequence caution: Sequence=AAB92667.1; Type=Frameshift; Positions=6, 10, 15;
1 PDB 3D structure from and Proteopedia for SYT7:
2D8K (3D)    
Secondary accessions: F5GZU9 Q08AH6
Alternative splicing: 2 isoforms:  O43581-1   O43581-2   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for SYT7: NX_O43581

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_O43581

  • SYT7 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (2 alternative transcripts): 
    NP_001238994.1  NP_004191.2  

    ENSEMBL proteins: 
     ENSP00000263846   ENSP00000444201   ENSP00000438171   ENSP00000441184   ENSP00000439694  
     ENSP00000444568   ENSP00000444019   ENSP00000437720   ENSP00000443576  

    Human Recombinant Protein Products: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
    OriGene Protein Over-expression Lysate: SYT7
    OriGene Custom Protein Services for SYT7 
    GenScript Custom Purified and Recombinant Proteins Services for SYT7
    Novus Biologicals SYT7 Protein
    Novus Biologicals SYT7 Lysate
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for SYT7

    Gene Ontology (GO): 5/8 cellular component terms (GO ID links to tree view) (see all 8):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005624membrane fraction ----
    GO:0005764lysosome IEA--
    GO:0005886plasma membrane IEA--
    GO:0008021synaptic vesicle ----
    GO:0016020membrane ----


    SYT7 for ontologies           About GeneDecksing



    SYT7 Antibody Products: 
    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Browse R&D Systems for Antibodies
    Browse OriGene Antibodies
    OriGene Custom Antibody Services for SYT7 
    GenScript Custom Superior Antibodies Services for SYT7
    Novus Biologicals SYT7 Antibody
    Search for Antibodies for SYT7 at Abcam  
    Uscn Antibodies for SYT7
    Search ThermoFisher Antibodies for SYT7

    Assay Products for SYT7: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for SYT7
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for SYT7


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    SYT7 for domains           About GeneDecksing

    5/6 InterPro domains/families (see all 6):
     IPR008973 C2_Ca/lipid-bd_dom_CaLB
     IPR001565 Synaptotagmin
     IPR018029 C2_membr_targeting
     IPR020477 C2_dom
     IPR015427 Synaptotagmin7

    Graphical View of Domain Structure for InterPro Entry O43581

    ProtoNet protein and cluster: O43581

    2 Blocks protein families:
    IPB000008 C2 domain
    IPB001565 Synaptotagmin signature


    UniProtKB/Swiss-Prot: SYT7_HUMAN, O43581
    Domain: The second C2 domain/C2B is responsible for SYNCRIP binding (By similarity)
    Similarity: Belongs to the synaptotagmin family
    Similarity: Contains 2 C2 domains


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: SYT7_HUMAN, O43581
    Function: May be involved in Ca(2+)-dependent exocytosis of secretory vesicles through Ca(2+) and phospholipid binding
    to the C2 domain or may serve as Ca(2+) sensors in the process of vesicular trafficking and exocytosis (By similarity)

         Genatlas biochemistry entry for SYT7:
    synaptotagmin 7,multifunctional intrinsic membrane protein of synaptic vesicles and chromaffin granules,involved in
    exocytosis and endocytosis

    miRNA
    Products:
        
    OriGene 3'-UTR Clone: SYT7
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat SYT7
    8/82 QIAGEN miScript miRNA Assays for microRNAs that regulate SYT7 (see all 82):
    hsa-miR-579 hsa-miR-1224-3p hsa-miR-106a hsa-miR-1260b hsa-miR-3916 hsa-miR-3142 hsa-miR-629 hsa-miR-149
    Browse SwitchGear 3'UTR luciferase reporter plasmids
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for SYT7 (see all 7)
    OriGene shRNA RFP: SYT7
    OriGene siRNA: SYT7
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat SYT7

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for SYT7

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for SYT7 (see all 5)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for SYT7
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: SYT7 (NM_004200)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for SYT7
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SYT7 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for SYT7
    Search LifeMap BioReagents cell lines for SYT7

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SYT7

    Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005215transporter activity IEA--
    GO:0005509calcium ion binding IEA--


    SYT7 for ontologies           About GeneDecksing


    1 GenomeRNAi human phenotype for SYT7:
     Decreased CXCL12 induced migra 

    Animal Models:
         Mouse knock-out Syt7tm1Nan for SYT7
         7 MGI mutant phenotypes (inferred from 3 alleles(MGI details for Syt7):
     behavior/neurological  cellular  immune system  integument  muscle 
     normal  reproductive system 

    SYT7 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section



    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for SYT7

    STRING Interaction Network Preview (showing 5 interactants - click image to see 8)

    5/9 Interacting proteins for SYT7 (O435813 ENSP000002638464) via UniProtKB, MINT, STRING, and/or I2D (see all 9)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    STX2P328563, ENSP000003425544I2D: score=1 STRING: ENSP00000342554
    STX4Q128463, ENSP000003177144I2D: score=1 STRING: ENSP00000317714
    STX1AQ166233, ENSP000002228124I2D: score=1 STRING: ENSP00000222812
    STX3Q132773, ENSP000003385624I2D: score=1 STRING: ENSP00000338562
    SYNCRIPO605063, ENSP000003586354I2D: score=2 STRING: ENSP00000358635
    About this table

    Gene Ontology (GO): 3 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0001778plasma membrane repair IEA--
    GO:0017158regulation of calcium ion-dependent exocytosis IEA--
    GO:0050796regulation of insulin secretion IEA--


    SYT7 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    SYT7 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for SYT7

    1 HMDB Compound for SYT7    About this table
    CompoundSynonyms CAS #PubMed Ids
    CalciumCa (see all 2)7440-70-2--
    2 Novoseek chemical compound relationships for SYT7 gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    calcium 34.8 29 12034723 (6), 15456748 (3), 19030179 (1), 16166648 (1) (see all 8)
    catecholamine 22.3 1 16166648 (1)

    Search CenterWatch for drugs/clinical trials and news about SYT7 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for SYT7 gene (2 alternative transcripts): 
    NM_001252065.1  NM_004200.3  

    Unigene Clusters for SYT7:

    Synaptotagmin VII
    Hs.131188  [show with all ESTs], Hs.684589
    Unigene Representative Sequences: NM_001252065, Y19237
    10 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000263846(uc009ynr.3 uc001nrv.3) ENST00000540677 ENST00000539246
    ENST00000539468 ENST00000539008 ENST00000542836(uc001nrx.1) ENST00000542670(uc001nrw.1)
    ENST00000535826 ENST00000540831 ENST00000545053

    miRNA
    Products:
         
    OriGene 3'-UTR Clone: SYT7
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat SYT7
    8/82 QIAGEN miScript miRNA Assays for microRNAs that regulate SYT7 (see all 82):
    hsa-miR-579 hsa-miR-1224-3p hsa-miR-106a hsa-miR-1260b hsa-miR-3916 hsa-miR-3142 hsa-miR-629 hsa-miR-149
    Browse SwitchGear 3'UTR luciferase reporter plasmids
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for SYT7 (see all 7)
    OriGene shRNA RFP: SYT7
    OriGene siRNA: SYT7
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat SYT7
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for SYT7 (see all 5)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for SYT7
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: SYT7 (NM_004200)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for SYT7
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SYT7 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for SYT7
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat SYT7
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat SYT7
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat SYT7

    Additional cDNA sequence: 

    Y19237.1 Y19239.1 

    5 DOTS entries:

    DT.97765536  DT.444726  DT.40126998  DT.120735009  DT.446299 

    2 AceView cDNA sequences:

    Y19237 Y19239 

    GeneLoc Exon Structure

    5/6 Alternative Splicing Database (ASD) splice patterns (SP) for SYT7 (see all 6)    About this scheme

    ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5a · 5b ^ 6 ^ 7 ^ 8a · 8b ^ 9a · 9b · 9c ^ 10 ^ 11 ^ 12a · 12b ^ 13 ^ 14
    SP1:                          -     -     -     -     -                                   -                                 
    SP2:                                -     -     -     -                                                                     
    SP3:                          -     -     -     -     -                                                                     
    SP4:                                                                                                                        
    SP5:                                            -                                                                           


    ECgene alternative splicing isoforms for SYT7

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    SYT7 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: AAAGTGCTGT

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image

    SYT7 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    2 LifeMap In Vivo Development Anatomical Compartments/Cells 
    Tissue Anatomical Compartment CellCategory (developmental path)
    EyeInner Nuclear LayernGnG Amacrine CellsAmacrine, Retina
    SomiteThoracic Ventrolateral Dermomyotome LipMuscle Progenitor CellsSkeletal Muscle
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization
    Stem Cell Differentiation: 3 LifeMap Cells 
    NameCategory
    Sclerotome cells (Primary Cell)Bone, Cartilage, Somite
    PureStem™ progenitor RASMO12 (Embryonic Progenitor Cell)
    PureStem™ progenitor Z1 (Embryonic Progenitor Cell)

    See SYT7 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for SYT7

    SOURCE GeneReport for Unigene clusters: Hs.131188 Hs.684589

    UniProtKB/Swiss-Prot: SYT7_HUMAN, O43581
    Tissue specificity: Expressed in a variety of adult and fetal tissues

        SABiosciences Custom PCR Arrays for SYT7
    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for SYT7
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat SYT7
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat SYT7
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat SYT7
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SYT7

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for SYT7 gene from 5/18 species (see all 18)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves SYT76
    Uncharacterized protein
    53(a)
    1 ↔ 1
    5(302372-310573)
    lizard
    (Anolis carolinensis)
    Reptilia SYT76
    --
    52(a)
    1 ↔ 1
    GL343235.1(967443-1042486)
    zebrafish
    (Danio rerio)
    Actinopterygii syt7b1 synaptotagmin VIIb 74.47(n)
    80.85(a)
      100334336  XM_002662751.2  XP_002662797.2 
    fruit fly
    (Drosophila melanogaster)
    Insecta Syt76
    Syt7
    38(a)
    1 ↔ 1
    4(299303-327107)
    worm
    (Caenorhabditis elegans)
    Secernentea snt-66
    SyNapTotagmin family member (snt-6)
    31(a)
    possible ortholog
    II(745469-750171)


    ENSEMBL Gene Tree for SYT7 (if available)
    TreeFam Gene Tree for SYT7 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for SYT7 gene
    SYT152  SYT42  SYT52  SYT82  SYT92  SYT32  SYT102  SYT62  
    SYT172  SYT112  SYT122  SYT22  SYT12  
    18/19 SIMAP similar genes for SYT7 using alignment to 8 protein entries:     SYT7_HUMAN (see all proteins) (see all similar genes):
    SYT6    SYT2    SYT10    SYT1    SYT5    SYT9
    SYT11    SYT17    SYT15    SYT4    SYT3    DOC2A
    DKFZp434D2429    RPH3A    CHR11SYT    SYTL2    SYT8    RASA4

    SYT7 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/962 NCBI SNPs in SYT7 are shown (see all 962    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 11 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1896297841,2
    --61280689(+) AGGGCA/GCTGGT 2 -- ds50010--------
    rs29438111,2
    C,F,A,H,--61280720(+) TTCCTG/ACTGTG 2 -- ds500111Minor allele frequency- A:0.34NA WA CSA EA 375
    rs1826570291,2
    --61280756(+) GGAGGC/TGGCAG 2 -- ds50010--------
    rs770462071,2
    F,--61280865(+) GCTTGG/ATCCCT 2 -- ds50011Minor allele frequency- A:0.03WA 118
    rs30191961,2
    C,F,A,H,--61281036(+) CACCCT/CCTTCC 2 -- ds50019Minor allele frequency- C:0.37WA NA EA 372
    rs1868855801,2
    --61281240(+) GAACAC/TGTATG 2 -- ut310--------
    rs10575471,2
    C,F,A,--61281287(-) CGTGTC/GTTGTG 2 -- ut3110Minor allele frequency- G:0.35NA WA CSA EA 370
    rs1116049711,2
    --61281292(+) GACACG/AACACA 2 -- ut311Minor allele frequency- A:0.50CSA 2
    rs10575441,2
    C,A,--61281373(-) CCGATG/ACCCCA 2 -- ut319Minor allele frequency- A:0.30MN NA CSA WA EA 550
    rs29244391,2
    C,F,A,H,--61281430(-) TCCTGT/CGCTCC 2 -- ut3110Minor allele frequency- C:0.47NA WA EA 374

    HapMap Linkage Disequilibrium report for SYT7 (61282785 - 61348620 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 2 variations for SYT7
         2 CNVs: 85815 75678

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing SYT7
    DNA2.0 Custom Variant and Variant Library Synthesis for SYT7

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    SYT7 for disorders           About GeneDecksing

    OMIM gene information: 604146    OMIM disorders: --

    8 diseases for SYT7:    About MalaCards
    prostate cancer    prostatitis    glucose intolerance    myositis
    tuberculosis    pancreatitis    neuronitis    mycobacterium tuberculosis

    Human Genome Epidemiology (HuGE) Navigator: SYT7 (3 documents)

    Export disorders for SYT7 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for SYT7 gene, integrated from 9 sources (see all 48):
    (articles sorted by number of sources associating them with SYT7)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Transcript mapping of the human chromosome 11q12-q13.1 gene-rich region identifies several newly described conserved genes. (PubMed id 9615227)1, 2, 3 Cooper P.R.... Shows T.B. (1998)
    2. Hydrophobic contributions to the membrane docking of s ynaptotagmin 7 C2A domain: mechanistic contrast between isoforms 1 and 7. (PubMed id 22966849)1 Brandt D.S....Knight J.D. (2012)
    3. SUMOylation regulates insulin exocytosis downstream o f secretory granule docking in rodents and humans. (PubMed id 21266332)1 Dai X.Q....MacDonald P.E. (2011)
    4. Variation at the NFATC2 locus increases the risk of t hiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipr il and rosiglitazone Medication (DREAM) study. (PubMed id 20628086)1 Bailey S.D....Anand S. (2010)
    5. Gene-centric association signals for lipids and apoli poproteins identified via the HumanCVD BeadChip. (PubMed id 19913121)1 Talmud P.J.... . (2009)
    6. Human chromosome 11 DNA sequence and analysis including novel gene identification. (PubMed id 16554811)2 Taylor T.D....Sakaki Y. (2006)
    7. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)2 Gerhard D.S....Malek J. (2004)
    8. Alternative splicing isoforms of synaptotagmin VII in the mouse, rat and human. (PubMed id 12071850)1 Fukuda M....Mikoshiba K. (2002)
    9. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)1 Strausberg R.L....Marra M.A. (2002)
    10. The Exocytosis-regulatory protein synaptotagmin VII mediates cell invasion by Trypanosoma cruzi. (PubMed id 11342594)1 Caler E.V....Andrews N.W. (2001)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 9066 HGNC: 11514 AceView: SYT7.1 Ensembl:ENSG00000011347 euGenes: HUgn9066
    ECgene: SYT7 H-InvDB: SYT7

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for SYT7 Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for SYT7 Genetics and Cytogenetics in Oncology and Haematology

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for SYT7 gene:
    Search GeneIP for patents involving SYT7

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
    In Situ Hybridization Assays from
    Advanced Cell Diagnostics
    About This Section

     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Browse Antibodies   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
     Browse OriGene Antibodies   OriGene shRNA RFP for SYT7  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for SYT7   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for SYT7  
     OriGene Protein Over-expression Lysate for SYT7   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for SYT7   OriGene 3'-UTR Clone for SYT7  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for SYT7   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for SYT7  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     Browse OriGene full length recombinant human proteins expressed in human HEK293 cells   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for SYT7   OriGene Custom Protein Services for SYT7  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat SYT7
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing SYT7
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat SYT7
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat SYT7
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat SYT7
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat SYT7
     GenScript Custom Purified and Recombinant Proteins Services for SYT7 GenScript cDNA clones with any tag delivered in your preferred vector for SYT7
     GenScript Custom Assay Services for SYT7 GenScript Custom Superior Antibodies Services for SYT7
     GenScript Custom overexpressing Cell Line Services for SYT7 CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Search for Antibodies & Assays

     Regulatory tfbs in SYT7 promoter
     Search Chromatin IP Primers for SYT7
     RT2 qPCR Primer Assay in human, mouse, rat SYT7
     GNC Network for SYT7
     SABiosciences Custom PCR Arrays for SYT7
     Search Tocris compounds for SYT7
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological cDNA Clones
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     SYT7 antibodies
     SYT7 proteins
     SYT7 lysates
     Search for Antibodies for SYT7 at Abcam
     See all of Abcam's Antibodies, Kits and Proteins for SYT7
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins




     SYT7 Proteins, Antibodies, CLIAs, and ELISAs
     Search LifeMap BioReagents cell lines for SYT7
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SYT7
     Browse SwitchGear 3'UTR luciferase reporter plasmids for SYT7
     SwitchGear Promoter luciferase reporter plasmids for SYT7
     Search ThermoFisher Antibodies for SYT7
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SYT7
           
    GeneCards Homepage - Last full update: 18 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      SYT7 gene at Home site.
    hostname: 356977-web1.xennexinc.com index build: 100 solr: 1.4