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Aliases for SYS1-DBNDD2 Gene

Subcategory (RNA class) for SYS1-DBNDD2 Gene


Quality Score for this RNA gene is


Aliases for SYS1-DBNDD2 Gene

  • SYS1-DBNDD2 Readthrough (NMD Candidate) 2 3
  • SYS1-DBNDD2 Readthrough (Non-Protein Coding) 2 3
  • C20orf169-DBNDD2 3

External Ids for SYS1-DBNDD2 Gene

ORGUL Members for SYS1-DBNDD2 Gene

Previous GeneCards Identifiers for SYS1-DBNDD2 Gene

  • GC20U900295
  • GC20P043427
  • GC20P043991

Summaries for SYS1-DBNDD2 Gene

Entrez Gene Summary for SYS1-DBNDD2 Gene

  • This locus represents naturally occurring read-through transcription from the neighboring SYS1 Golgi-localized integral membrane protein homolog and dysbindin domain containing 2 (DBNDD2) genes. The read-through transcript includes the majority of exons from each individual gene, but it would be subject to nonsense-mediated mRNA decay (NMD) and is therefore predicted to be non-coding. [provided by RefSeq, Oct 2010]

GeneCards Summary for SYS1-DBNDD2 Gene

SYS1-DBNDD2 (SYS1-DBNDD2 Readthrough (NMD Candidate)) is an RNA Gene, and is affiliated with the antisense RNA class. An important paralog of this gene is SYS1.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SYS1-DBNDD2 Gene

Genomics for SYS1-DBNDD2 Gene

Regulatory Elements for SYS1-DBNDD2 Gene

Genomic Location for SYS1-DBNDD2 Gene

45,363,169 bp from pter
45,410,610 bp from pter
47,442 bases
Plus strand

Genomic View for SYS1-DBNDD2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SYS1-DBNDD2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SYS1-DBNDD2 Gene

Proteins for SYS1-DBNDD2 Gene

  • Protein details for SYS1-DBNDD2 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Recommended name:
    Protein SYS1-DBNDD2
    Protein Accession:
    Secondary Accessions:

    Protein attributes for SYS1-DBNDD2 Gene

    78 amino acids
    Molecular mass:
    8717 Da
    Quaternary structure:
    No Data Available
  • Protein details for SYS1-DBNDD2 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Recommended name:
    Protein SYS1-DBNDD2
    Protein Accession:
    Secondary Accessions:

    Protein attributes for SYS1-DBNDD2 Gene

    97 amino acids
    Molecular mass:
    11030 Da
    Quaternary structure:
    No Data Available

neXtProt entry for SYS1-DBNDD2 Gene

Proteomics data for SYS1-DBNDD2 Gene at MOPED

Post-translational modifications for SYS1-DBNDD2 Gene

No Post-translational modifications

Other Protein References for SYS1-DBNDD2 Gene

No data available for DME Specific Peptides for SYS1-DBNDD2 Gene

Domains for SYS1-DBNDD2 Gene

Protein Domains for SYS1-DBNDD2 Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SYS1-DBNDD2: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SYS1-DBNDD2 Gene

Function for SYS1-DBNDD2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SYS1-DBNDD2 Gene

Localization for SYS1-DBNDD2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SYS1-DBNDD2 Gene

Pathways for SYS1-DBNDD2 Gene

SuperPathways for SYS1-DBNDD2 Gene

No Data Available

Interacting Proteins for SYS1-DBNDD2 Gene

Gene Ontology (GO) - Biological Process for SYS1-DBNDD2 Gene


No data available for Pathways by source for SYS1-DBNDD2 Gene

Transcripts for SYS1-DBNDD2 Gene

mRNA/cDNA for SYS1-DBNDD2 Gene

(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate SYS1-DBNDD2
    • Block miRNA regulation of SYS1-DBNDD2 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for SYS1-DBNDD2

    Primer Products

    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for SYS1-DBNDD2 Gene

    No ASD Table

    Relevant External Links for SYS1-DBNDD2 Gene

    GeneLoc Exon Structure for
    ECgene alternative splicing isoforms for

    Expression for SYS1-DBNDD2 Gene

    mRNA expression in normal human tissues for SYS1-DBNDD2 Gene

    Protein differential expression in normal tissues for SYS1-DBNDD2 Gene

    This gene is overexpressed in Placenta (69.0).

    Integrated Proteomics: protein expression from for SYS1-DBNDD2 Gene

    genes like me logo Genes that share expressions with SYS1-DBNDD2: view

    Expression partners for SYS1-DBNDD2 Gene

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for SYS1-DBNDD2 Gene

    Orthologs for SYS1-DBNDD2 Gene

    This gene was present in the common ancestor of animals.

    Orthologs for SYS1-DBNDD2 Gene

    Organism Taxonomy Gene Similarity Type Details
    (Mus musculus)
    Mammalia Gm20458 36
    • 96 (a)
    (Ornithorhynchus anatinus)
    Mammalia -- 36
    • 21 (a)
    -- 36
    • 46 (a)
    (Gallus gallus)
    Aves SYS1 36
    • 36 (a)
    (Anolis carolinensis)
    Reptilia -- 36
    • 42 (a)
    (Danio rerio)
    Actinopterygii sys1 36
    • 39 (a)
    fruit fly
    (Drosophila melanogaster)
    Insecta CG11753 36
    • 20 (a)
    (Caenorhabditis elegans)
    Secernentea T03F1.12 36
    • 14 (a)
    sea squirt
    (Ciona savignyi)
    Ascidiacea -- 36
    • 25 (a)
    Species with no ortholog for SYS1-DBNDD2:
    • A. gosspyii yeast (Ashbya gossypii)
    • Actinobacteria (Mycobacterium tuberculosis)
    • African clawed frog (Xenopus laevis)
    • African malaria mosquito (Anopheles gambiae)
    • Alicante grape (Vitis vinifera)
    • alpha proteobacteria (Wolbachia pipientis)
    • amoeba (Dictyostelium discoideum)
    • Archea (Pyrococcus horikoshii)
    • baker's yeast (Saccharomyces cerevisiae)
    • barley (Hordeum vulgare)
    • beta proteobacteria (Neisseria meningitidis)
    • bread mold (Neurospora crassa)
    • chimpanzee (Pan troglodytes)
    • Chromalveolata (Phytophthora infestans)
    • common water flea (Daphnia pulex)
    • corn (Zea mays)
    • cow (Bos Taurus)
    • dog (Canis familiaris)
    • E. coli (Escherichia coli)
    • filamentous fungi (Aspergillus nidulans)
    • Firmicute bacteria (Streptococcus pneumoniae)
    • fission yeast (Schizosaccharomyces pombe)
    • green algae (Chlamydomonas reinhardtii)
    • honey bee (Apis mellifera)
    • K. lactis yeast (Kluyveromyces lactis)
    • loblloly pine (Pinus taeda)
    • malaria parasite (Plasmodium falciparum)
    • medicago trunc (Medicago Truncatula)
    • moss (Physcomitrella patens)
    • oppossum (Monodelphis domestica)
    • orangutan (Pongo pygmaeus)
    • pig (Sus scrofa)
    • rainbow trout (Oncorhynchus mykiss)
    • rat (Rattus norvegicus)
    • rice (Oryza sativa)
    • rice blast fungus (Magnaporthe grisea)
    • schistosome parasite (Schistosoma mansoni)
    • sea anemone (Nematostella vectensis)
    • sea urchin (Strongylocentrotus purpuratus)
    • sorghum (Sorghum bicolor)
    • soybean (Glycine max)
    • stem rust fungus (Puccinia graminis)
    • sugarcane (Saccharum officinarum)
    • thale cress (Arabidopsis thaliana)
    • tomato (Lycopersicon esculentum)
    • toxoplasmosis (Toxoplasma gondii)
    • Trichoplax (Trichoplax adhaerens)
    • tropical clawed frog (Silurana tropicalis)
    • wheat (Triticum aestivum)

    Evolution for SYS1-DBNDD2 Gene

    Gene Tree for SYS1-DBNDD2 (if available)
    Gene Tree for SYS1-DBNDD2 (if available)

    Paralogs for SYS1-DBNDD2 Gene

    Paralogs for SYS1-DBNDD2 Gene

    Selected SIMAP similar genes for SYS1-DBNDD2 Gene using alignment to 2 proteins:

    genes like me logo Genes that share paralogs with SYS1-DBNDD2: view

    Variants for SYS1-DBNDD2 Gene

    Relevant External Links for SYS1-DBNDD2 Gene

    HapMap Linkage Disequilibrium report

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for SYS1-DBNDD2 Gene

    Disorders for SYS1-DBNDD2 Gene

    No disorders were found for SYS1-DBNDD2 Gene.

    No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for SYS1-DBNDD2 Gene

    Publications for SYS1-DBNDD2 Gene

    1. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
    3. Expression of conjoined genes: another mechanism for gene regulation in eukaryotes. (PMID: 20967262) Prakash T. … Taylor T.D. (PLoS ONE 2010) 3

    Products for SYS1-DBNDD2 Gene

    Sources for SYS1-DBNDD2 Gene

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