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Aliases for SYP-AS1 Gene

Subcategory (RNA class) for SYP-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for SYP-AS1 Gene

  • SYP Antisense RNA 1 2 3
  • SYP Antisense RNA 1 (Non-Protein Coding) 2

External Ids for SYP-AS1 Gene

ORGUL Members for SYP-AS1 Gene

Summaries for SYP-AS1 Gene

GeneCards Summary for SYP-AS1 Gene

SYP-AS1 (SYP Antisense RNA 1) is a RNA Gene, and belongs to antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SYP-AS1 Gene

Genomics for SYP-AS1 Gene

Genomic Location for SYP-AS1 Gene

Start:
49,198,839 bp from pter
End:
49,202,454 bp from pter
Size:
3,616 bases
Orientation:
Plus strand

Genomic View for SYP-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SYP-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SYP-AS1 Gene

No data available for Regulatory Elements for SYP-AS1 Gene

Proteins for SYP-AS1 Gene

Post-translational modifications for SYP-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SYP-AS1 Gene

Domains for SYP-AS1 Gene

Gene Families for SYP-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with SYP-AS1: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for SYP-AS1 Gene

Function for SYP-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SYP-AS1 Gene

Localization for SYP-AS1 Gene

No data available for Gene Ontology (GO) - Cellular Components for SYP-AS1 Gene

Pathways for SYP-AS1 Gene

SuperPathways for SYP-AS1 Gene

No Data Available

Interacting Proteins for SYP-AS1 Gene

Gene Ontology (GO) - Biological Process for SYP-AS1 Gene

None

No data available for Pathways by source for SYP-AS1 Gene

Transcripts for SYP-AS1 Gene

mRNA/cDNA for SYP-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SYP-AS1 Gene

No ASD Table

Relevant External Links for SYP-AS1 Gene

GeneLoc Exon Structure for
SYP-AS1
ECgene alternative splicing isoforms for
SYP-AS1

Expression for SYP-AS1 Gene

mRNA expression in normal human tissues for SYP-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for SYP-AS1 Gene

This gene is overexpressed in Brain - Frontal Cortex (BA9) (9.1), Brain - Anterior cingulate cortex (BA24) (7.3), Brain - Cortex (5.3), Brain - Hypothalamus (4.3), and Brain - Cerebellar Hemisphere (4.2).
genes like me logo Genes that share expressions with SYP-AS1: view

Orthologs for SYP-AS1 Gene

Evolution for SYP-AS1 Gene

ENSEMBL:
Gene Tree for SYP-AS1 (if available)
TreeFam:
Gene Tree for SYP-AS1 (if available)

No data available for Orthologs for SYP-AS1 Gene

Paralogs for SYP-AS1 Gene

No data available for Paralogs for SYP-AS1 Gene

Variants for SYP-AS1 Gene

Sequence variations from dbSNP and Humsavar for SYP-AS1 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type MAF
rs12395646 -- 49,202,792(+) gcaat(C/T)tcagt downstream-variant-500B
rs12851853 -- 49,202,776(+) gctgg(A/G)gtgca downstream-variant-500B
rs12860308 -- 49,202,732(+) tgttt(G/T)gtttt downstream-variant-500B
rs12860310 -- 49,202,737(+) tgttt(G/T)gtttt downstream-variant-500B
rs111508987 -- 49,202,466(+) TAGTG(A/T)ATCAT downstream-variant-500B

Relevant External Links for SYP-AS1 Gene

HapMap Linkage Disequilibrium report
SYP-AS1

No data available for Structural Variations from Database of Genomic Variants (DGV) for SYP-AS1 Gene

Disorders for SYP-AS1 Gene

No disorders were found for SYP-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for SYP-AS1 Gene

Publications for SYP-AS1 Gene

No publications were found for SYP-AS1 Gene.

Products for SYP-AS1 Gene

Sources for SYP-AS1 Gene

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