Free for academic non-profit institutions. Other users need a Commercial license

Aliases for SYNGR2P1 Gene

Aliases for SYNGR2P1 Gene

  • Synaptogyrin 2 Pseudogene 1 2 3
  • Synaptogyrin 2 Pseudogene 2
  • Cellugyrin Pseudogene 3
  • SYNGR2P 3

External Ids for SYNGR2P1 Gene

Previous Symbols for SYNGR2P1 Gene

  • SYNGR2P

Summaries for SYNGR2P1 Gene

GeneCards Summary for SYNGR2P1 Gene

SYNGR2P1 (Synaptogyrin 2 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SYNGR2P1 Gene

Genomics for SYNGR2P1 Gene

Genomic Location for SYNGR2P1 Gene

Start:
30,044,440 bp from pter
End:
30,046,080 bp from pter
Size:
1,641 bases
Orientation:
Plus strand

Genomic View for SYNGR2P1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SYNGR2P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SYNGR2P1 Gene

No data available for Regulatory Elements for SYNGR2P1 Gene

Proteins for SYNGR2P1 Gene

Post-translational modifications for SYNGR2P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SYNGR2P1 Gene

Domains for SYNGR2P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SYNGR2P1 Gene

Function for SYNGR2P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SYNGR2P1 Gene

Localization for SYNGR2P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SYNGR2P1 Gene

Pathways for SYNGR2P1 Gene

SuperPathways for SYNGR2P1 Gene

No Data Available

Interacting Proteins for SYNGR2P1 Gene

Gene Ontology (GO) - Biological Process for SYNGR2P1 Gene

None

No data available for Pathways by source for SYNGR2P1 Gene

Transcripts for SYNGR2P1 Gene

mRNA/cDNA for SYNGR2P1 Gene

(1) Selected AceView cDNA sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SYNGR2P1 Gene

No ASD Table

Relevant External Links for SYNGR2P1 Gene

GeneLoc Exon Structure for
SYNGR2P1
ECgene alternative splicing isoforms for
SYNGR2P1

Expression for SYNGR2P1 Gene

mRNA differential expression in normal tissues according to GTEx for SYNGR2P1 Gene

This gene is overexpressed in Testis (33.5).

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for SYNGR2P1 Gene

Orthologs for SYNGR2P1 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SYNGR2P1 Gene

Organism Taxonomy Gene Similarity Type Details
tropical clawed frog
(Silurana tropicalis)
Amphibia Str.19173 35
Species with no ortholog for SYNGR2P1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

No data available for Evolution for SYNGR2P1 Gene

Paralogs for SYNGR2P1 Gene

No data available for Paralogs for SYNGR2P1 Gene

Variants for SYNGR2P1 Gene

Relevant External Links for SYNGR2P1 Gene

HapMap Linkage Disequilibrium report
SYNGR2P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for SYNGR2P1 Gene

Disorders for SYNGR2P1 Gene

No disorders were found for SYNGR2P1 Gene.

No data available for UniProtKB/Swiss-Prot for SYNGR2P1 Gene

Publications for SYNGR2P1 Gene

  1. Characterization of the human synaptogyrin gene family. (PMID: 9760194) Kedra D. … Dumanski J.P. (Hum. Genet. 1998) 2 3

Products for SYNGR2P1 Gene

Sources for SYNGR2P1 Gene

Back to Top

Content