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Aliases for SYF2P1 Gene

Subcategory (RNA class) for SYF2P1 Gene

lncRNA

Aliases for SYF2P1 Gene

  • SYF2 Pre-MRNA Splicing Factor Pseudogene 1 2 3 5
  • CCNDBP1 Interactor Pseudogene 2 3
  • SYF2 Homolog, RNA Splicing Factor (S. Cerevisiae) Pseudogene 1 2
  • SYF2 Homolog, RNA Splicing Factor (S. Cerevisiae) Pseudogene 2
  • SYF2 Homolog, RNA Splicing Factor Pseudogene 1 3
  • CBPINP 3
  • SYF2P 3

External Ids for SYF2P1 Gene

ORGUL Members for SYF2P1 Gene

Previous HGNC Symbols for SYF2P1 Gene

  • CBPINP
  • SYF2P

Previous GeneCards Identifiers for SYF2P1 Gene

  • GC14M031010

Summaries for SYF2P1 Gene

GeneCards Summary for SYF2P1 Gene

SYF2P1 (SYF2 Pre-MRNA Splicing Factor Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for SYF2P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SYF2P1 Gene

Genomics for SYF2P1 Gene

GeneHancer (GH) Regulatory Elements for SYF2P1 Gene

Promoters and enhancers for SYF2P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14I030522 Enhancer 0.6 ENCODE 0.4 +19.8 19821 0.5 ELF3 CTCF ZNF3 ZNF654 HLF ZNF143 RAD21 MIXL1 ENSG00000278587 SYF2P1 G2E3-AS1
GH14I030519 Enhancer 0.4 VISTA 0.3 +21.4 21389 1.9 CTCF ELF3 HLF ENSG00000278587 SYF2P1 G2E3-AS1
GH14I030529 Enhancer 0.2 ENCODE 0.4 +12.7 12702 0.3 ENSG00000278587 SYF2P1 G2E3-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SYF2P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SYF2P1 Gene

Genomic Locations for SYF2P1 Gene
chr14:30,541,750-30,542,188
(GRCh38/hg38)
Size:
439 bases
Orientation:
Minus strand
chr14:31,010,956-31,011,394
(GRCh37/hg19)

Genomic View for SYF2P1 Gene

Genes around SYF2P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SYF2P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SYF2P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SYF2P1 Gene

Proteins for SYF2P1 Gene

Post-translational modifications for SYF2P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SYF2P1 Gene

Domains & Families for SYF2P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SYF2P1 Gene

Function for SYF2P1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SYF2P1 Gene

Localization for SYF2P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SYF2P1 Gene

Pathways & Interactions for SYF2P1 Gene

SuperPathways for SYF2P1 Gene

No Data Available

Interacting Proteins for SYF2P1 Gene

Gene Ontology (GO) - Biological Process for SYF2P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SYF2P1 Gene

Drugs & Compounds for SYF2P1 Gene

No Compound Related Data Available

Transcripts for SYF2P1 Gene

mRNA/cDNA for SYF2P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SYF2P1 Gene

No ASD Table

Relevant External Links for SYF2P1 Gene

GeneLoc Exon Structure for
SYF2P1
ECgene alternative splicing isoforms for
SYF2P1

Expression for SYF2P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SYF2P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of SYF2P1 Gene:

SYF2P1
genes like me logo Genes that share expression patterns with SYF2P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SYF2P1 Gene

Orthologs for SYF2P1 Gene

Evolution for SYF2P1 Gene

ENSEMBL:
Gene Tree for SYF2P1 (if available)
TreeFam:
Gene Tree for SYF2P1 (if available)

No data available for Orthologs for SYF2P1 Gene

Paralogs for SYF2P1 Gene

No data available for Paralogs for SYF2P1 Gene

Variants for SYF2P1 Gene

Additional Variant Information for SYF2P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SYF2P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SYF2P1 Gene

Disorders for SYF2P1 Gene

No disorders were found for SYF2P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SYF2P1 Gene

Publications for SYF2P1 Gene

No publications were found for SYF2P1 Gene.

Products for SYF2P1 Gene

Sources for SYF2P1 Gene

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