Free for academic non-profit institutions. Other users need a Commercial license

Aliases for SUSD3 Gene

Aliases for SUSD3 Gene

  • Sushi Domain Containing 3 2 3

External Ids for SUSD3 Gene

Previous GeneCards Identifiers for SUSD3 Gene

  • GC09P091162
  • GC09P092900
  • GC09P094860
  • GC09P095820
  • GC09P065497

Summaries for SUSD3 Gene

GeneCards Summary for SUSD3 Gene

SUSD3 (Sushi Domain Containing 3) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SUSD3 Gene

Genomics for SUSD3 Gene

Regulatory Elements for SUSD3 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for SUSD3 Gene

93,058,688 bp from pter
93,085,138 bp from pter
26,451 bases
Plus strand

Genomic View for SUSD3 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SUSD3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SUSD3 Gene

Proteins for SUSD3 Gene

  • Protein details for SUSD3 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Sushi domain-containing protein 3
    Protein Accession:
    Secondary Accessions:
    • Q49AA6
    • Q6UXV7

    Protein attributes for SUSD3 Gene

    255 amino acids
    Molecular mass:
    27119 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for SUSD3 Gene


neXtProt entry for SUSD3 Gene

Proteomics data for SUSD3 Gene at MOPED

Post-translational modifications for SUSD3 Gene

  • Glycosylation at Asn27
  • Modification sites at PhosphoSitePlus

No data available for DME Specific Peptides for SUSD3 Gene

Domains for SUSD3 Gene

Protein Domains for SUSD3 Gene

Suggested Antigen Peptide Sequences for SUSD3 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry



  • Q96L08
  • Contains 1 Sushi (CCP/SCR) domain.
genes like me logo Genes that share domains with SUSD3: view

No data available for Gene Families for SUSD3 Gene

Function for SUSD3 Gene

Animal Model Products

miRNA for SUSD3 Gene

miRTarBase miRNAs that target SUSD3

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for SUSD3

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for SUSD3 Gene

Localization for SUSD3 Gene

Subcellular locations from UniProtKB/Swiss-Prot for SUSD3 Gene

Membrane; Single-pass membrane protein.

Subcellular locations from

Jensen Localization Image for SUSD3 Gene COMPARTMENTS Subcellular localization image for SUSD3 gene
Compartment Confidence
plasma membrane 2
nucleus 1

Gene Ontology (GO) - Cellular Components for SUSD3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with SUSD3: view

Pathways for SUSD3 Gene

SuperPathways for SUSD3 Gene

No Data Available

Interacting Proteins for SUSD3 Gene

Gene Ontology (GO) - Biological Process for SUSD3 Gene


No data available for Pathways by source for SUSD3 Gene

Transcripts for SUSD3 Gene

Unigene Clusters for SUSD3 Gene

Sushi domain containing 3:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for SUSD3

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for SUSD3 Gene

ExUns: 1a · 1b · 1c ^ 2a · 2b ^ 3 ^ 4 ^ 5a · 5b ^ 6 ^ 7a · 7b
SP1: - - -
SP2: - - - -
SP3: - - - - -

Relevant External Links for SUSD3 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SUSD3 Gene

mRNA expression in normal human tissues for SUSD3 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for SUSD3 Gene

This gene is overexpressed in Testis (8.4) and Whole Blood (5.3).

Protein differential expression in normal tissues for SUSD3 Gene

This gene is overexpressed in Adipocyte (56.5) and CD8 Tcells (9.3).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for SUSD3 Gene

SOURCE GeneReport for Unigene cluster for SUSD3 Gene Hs.88417

genes like me logo Genes that share expressions with SUSD3: view

Expression partners for SUSD3 Gene

In Situ Assay Products

No data available for mRNA Expression by UniProt/SwissProt for SUSD3 Gene

Orthologs for SUSD3 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SUSD3 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia SUSD3 35
  • 76.55 (n)
  • 67.8 (a)
SUSD3 36
  • 65 (a)
(Mus musculus)
Mammalia Susd3 35
  • 75.4 (n)
  • 69.76 (a)
Susd3 16
Susd3 36
  • 64 (a)
(Pan troglodytes)
Mammalia SUSD3 35
  • 99.08 (n)
  • 99.21 (a)
SUSD3 36
  • 99 (a)
(Rattus norvegicus)
Mammalia Susd3 35
  • 77.15 (n)
  • 70.56 (a)
(Canis familiaris)
Mammalia SUSD3 36
  • 56 (a)
(Monodelphis domestica)
Mammalia -- 36
  • 39 (a)
-- 36
  • 55 (a)
-- 36
  • 15 (a)
(Ornithorhynchus anatinus)
Mammalia SUSD3 36
  • 47 (a)
(Gallus gallus)
Aves SUSD3 36
  • 39 (a)
(Anolis carolinensis)
Reptilia SUSD3 36
  • 37 (a)
(Danio rerio)
Actinopterygii SUSD3 36
  • 27 (a)
Species with no ortholog for SUSD3:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SUSD3 Gene

Gene Tree for SUSD3 (if available)
Gene Tree for SUSD3 (if available)

Paralogs for SUSD3 Gene

No data available for Paralogs for SUSD3 Gene

Variants for SUSD3 Gene

Sequence variations from dbSNP and Humsavar for SUSD3 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type MAF
rs1131768 -- 93,075,788(+) GGCAC(C/G)TGCGC synonymous-codon, reference, intron-variant
rs1131773 - 93,077,974(+) AGAGC(A/G)AGCGG reference, missense
rs1134127 -- 93,075,611(-) AGACC(A/G/T)GGGGA intron-variant
rs3209653 -- 93,085,134(+) CTACA(A/G)AAAAA utr-variant-3-prime
rs4077176 -- 93,064,914(+) TGCCT(C/T)GAGTG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for SUSD3 Gene

Variant ID Type Subtype PubMed ID
nsv526296 CNV Loss 19592680
nsv893575 CNV Loss 21882294
nsv893576 CNV Gain 21882294
dgv8260n71 CNV Loss 21882294
esv2659260 CNV Deletion 23128226
esv32996 CNV Gain 17666407
esv2738780 CNV Deletion 23290073

Relevant External Links for SUSD3 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for SUSD3 Gene

Disorders for SUSD3 Gene

No disorders were found for SUSD3 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for SUSD3 Gene

Publications for SUSD3 Gene

  1. The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PMID: 12975309) Clark H.F. … Gray A.M. (Genome Res. 2003) 2 3 4
  2. DNA sequence and analysis of human chromosome 9. (PMID: 15164053) Humphray S.J. … Dunham I. (Nature 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. Identification of genes related to Parkinson's disease using expressed sequence tags. (PMID: 17213182) Kim J.M. … Kim N.S. (DNA Res. 2006) 3
  5. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) OlA!h J. … OvA!di J. (J. Biol. Chem. 2011) 3

Products for SUSD3 Gene

Sources for SUSD3 Gene

Back to Top