Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 



SUSD1 Gene

protein-coding   GIFtS: 48
GCID: GC09M114803

Sushi Domain Containing 1

  Try our

disease database 

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
About This Section

TryGeneCards Plus

Aliases
Sushi Domain Containing 11 2
Sushi Domain-Containing Protein 12

External Ids:    HGNC: 254131   Entrez Gene: 644202   Ensembl: ENSG000001068687   UniProtKB: Q6UWL23   

Export aliases for SUSD1 gene to outside databases

Previous GC identifers: GC09M110182 GC09M111882 GC09M113842 GC09M084401


(According to Entrez Gene, GeneCards, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

TryGeneCards Plus

GeneCards Summary for SUSD1 Gene:
SUSD1 (sushi domain containing 1) is a protein-coding gene. GO annotations related to this gene include calcium ion binding.


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 75), Regulatory elements and Epigenetics data according to QIAGEN, and/or SwitchGear Genomics)
About This Section

TryGeneCards Plus
RefSeq DNA sequence at NCBI GenBank:
NC_000009.11  NC_018920.2  NT_008470.20  
Regulatory elements:
   Regulatory transcription factor binding sites in the SUSD1 gene promoter:
         AhR   AML1a   LUN-1   HNF-3beta   Arnt   GATA-1   POU2F1   Zic1   POU2F1a   c-Myb   
         Other transcription factors

Browse SwitchGear Promoter luciferase reporter plasmids
   Search Chromatin IP Primers for SUSD1

Epigenetics:
DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat SUSD1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 9q31.3-q33.1   Ensembl cytogenetic band:  9q32   HGNC cytogenetic band: 9q31.3-q33.1

SUSD1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
SUSD1 gene location

GeneLoc information about chromosome 9         GeneLoc Exon Structure

GeneLoc location for GC09M114803:  view genomic region     (about GC identifiers)

Start:
114,803,061 bp from pter      End:
114,937,688 bp from pter
Size:
134,628 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, 2neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, Cloud-Clone Corp., and/or eBioscience,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, Cloud-Clone Corp., and/or eBioscience, Antibodies by EMD Millipore, R&D Systems, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, LSBio, Abcam, Cloud-Clone Corp, and/or others.)
About This Section

TryGeneCards Plus

UniProtKB/Swiss-Prot: SUSD1_HUMAN, Q6UWL2 (See protein sequence)
Recommended Name: Sushi domain-containing protein 1 precursor  
Size: 747 amino acids; 82710 Da
Sequence caution: Sequence=BAB15149.1; Type=Erroneous initiation; Note=Translation N-terminally extended;
Sequence=BAB71259.1; Type=Erroneous initiation; Note=Translation N-terminally extended; Sequence=CAI12348.2;
Type=Erroneous gene model prediction; Sequence=CAI95300.2; Type=Erroneous gene model prediction;
Secondary accessions: A1A4C5 A8KA03 Q5T8V6 Q5T8V7 Q6P9G7 Q8WU83 Q96DM9 Q9H6V2 Q9NTA7
Alternative splicing: 3 isoforms:  Q6UWL2-1   Q6UWL2-2   Q6UWL2-3   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for SUSD1: NX_Q6UWL2

Explore proteomics data for SUSD1 at MOPED

Post-translational modifications: 

  • Ubiquitination2 at Lys686
  • Glycosylation2 at Asn87, Asn112, Asn193, Asn253, Asn308, Asn348, Asn367, Asn563
  • Modification sites at PhosphoSitePlus

  • See SUSD1 Protein Expression from SPIRE MOPED, PaxDB, and MaxQB

    REFSEQ proteins (3 alternative transcripts): 
    NP_001269569.1  NP_001269572.1  NP_071931.2  

    ENSEMBL proteins: 
     ENSP00000347558   ENSP00000363388   ENSP00000363382   ENSP00000431590   ENSP00000404269  
     ENSP00000363381  

    SUSD1 Human Recombinant Protein Products:

    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    OriGene Purified Protein for SUSD1
    Browse OriGene Protein Over-expression Lysates
    OriGene MassSpec for SUSD1
    OriGene Custom Protein Services for SUSD1
    GenScript Custom Purified and Recombinant Proteins Services for SUSD1
    Browse Sino Biological Recombinant Proteins
    Browse Sino Biological Cell Lysates
    Browse ProSpec Recombinant Proteins
    Cloud-Clone Corp. Proteins for SUSD1

     
    Search eBioscience for Proteins for SUSD1 

    SUSD1 Antibody Products:

    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Browse R&D Systems for Antibodies
    Browse OriGene Antibodies
    OriGene Custom Antibody Services for SUSD1
    Novus Biologicals SUSD1 Antibody
    Abcam antibodies for SUSD1
    Cloud-Clone Corp. Antibodies for SUSD1
    Search ThermoFisher Antibodies for SUSD1
    Search LSBio for Antibodies for SUSD1

    SUSD1 Assay Products:

    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Assay Services for SUSD1
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for SUSD1
    Browse Enzo Life Sciences for kits & assays
    Cloud-Clone Corp. ELISAs for SUSD1
    Cloud-Clone Corp. CLIAs for SUSD1
    Search eBioscience for ELISAs for SUSD1 


    (According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    TryGeneCards Plus
    Selected InterPro protein domains (see all 8):
     IPR001881 EGF-like_Ca-bd_dom
     IPR000742 EG-like_dom
     IPR009030 Growth_fac_rcpt_N_dom
     IPR013032 EGF-like_CS
     IPR000436 Sushi_SCR_CCP

    Graphical View of Domain Structure for InterPro Entry Q6UWL2

    ProtoNet protein and cluster: Q6UWL2

    UniProtKB/Swiss-Prot: SUSD1_HUMAN, Q6UWL2
    Similarity: Contains 3 EGF-like domains
    Similarity: Contains 2 Sushi (CCP/SCR) domains


    Find genes that share domains with SUSD1           About GenesLikeMe


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory, genOway,
    transcription factor targeting from QIAGEN and/or HOMER, miRNA Gene Targets from miRTarBase, shRNA from OriGene, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, SwitchGear Genomics, Gene Editing from DNA2.0, Clones from OriGene, GenScript, Sino Biological, DNA2.0, Vector BioLabs and/or Addgene, Cell Lines from GenScript, ESI BIO, In Situ Hybridization Assays from Advanced Cell Diagnostics, Flow cytometry from eBioscience, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
    About This Section

    TryGeneCards Plus

         Gene Ontology (GO): 2 molecular function terms:    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005509calcium ion binding IEA--
    GO:0005515protein binding ----
         
    Find genes that share ontologies with SUSD1           About GenesLikeMe


    Phenotypes:
         1 MGI phenotypic allele for Susd1 (no phenotypes)

    Find genes that share phenotypes with SUSD1           About GenesLikeMe

    Animal Models:
         MGI mouse knock-out Susd1tm1Lex for SUSD1

       inGenious Targeting Laboratory: Let us create your new Knockout/Knockin mouse model for SUSD1
       inGenious Targeting Laboratory: Contact us about creating complex and humanized mouse models for SUSD1

       genOway customized KO model: permanent, tissue-specific or time-controlled inactivation for SUSD1
       genOway customized Knockin model: humanization, point mutation, expression monitoring, etc. for SUSD1

    miRNA
    Products:
        
    miRTarBase miRNAs that target SUSD1:
    hsa-mir-1 (MIRT023738)

    Block miRNA regulation of human, mouse, rat SUSD1 using miScript Target Protectors
    3 qRT-PCR Assays for microRNAs that regulate SUSD1:
    hsa-miR-582-3p hsa-miR-205 hsa-miR-589*
    SwitchGear 3'UTR luciferase reporter plasmidSUSD1 3' UTR sequence
    Inhib. RNA
    Products:
        
    OriGene RNAi products in human, mouse, rat for SUSD1
    Predesigned siRNA for gene silencing in human, mouse, rat SUSD1

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for SUSD1

    Clone
    Products:
         
    OriGene clones in human, mouse for SUSD1 (see all 8)
    OriGene ORF clones in mouse, rat for SUSD1
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
    GenScript: all cDNA clones in your preferred vector: SUSD1 (NM_022486)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for SUSD1
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SUSD1

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for SUSD1
    Browse ESI BIO Cell Lines and PureStem Progenitors for SUSD1 
    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SUSD1


    (According to UniProtKB, COMPARTMENTS Subcellular localization database, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
    About This Section

    TryGeneCards Plus

    Subcellular locations from UniProtKB/Swiss-Prot
    SUSD1_HUMAN, Q6UWL2: Membrane; Single-pass type I membrane protein (Potential)
    Subcellular locations from COMPARTMENTS: 

    CompartmentConfidence
    plasma membrane3
    cytoskeleton1
    endoplasmic reticulum1
    extracellular1
    golgi apparatus1
    mitochondrion1
    nucleus1
    peroxisome1

    Gene Ontology (GO): 1 cellular component term:    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0016021integral component of membrane IEA--

    Find genes that share ontologies with SUSD1           About GenesLikeMe


    (SuperPaths according to PathCards, Pathways according to R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to QIAGEN, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene).
    About This Section

    TryGeneCards Plus



        Custom Pathway & Disease-focused RT2 Profiler PCR Arrays for SUSD1
    Interactions:

        Search GeneGlobe Interaction Network for SUSD1

    STRING Interaction Network Preview (showing 1 interactants - click image to see more details)

    2 Interacting proteins for SUSD1 (Q6UWL22, 3 ENSP000003633884) via UniProtKB, MINT, STRING, and/or I2D
    InteractantInteraction Details
    GeneCardExternal ID(s)
    ATF7IPQ6VMQ62, 3MINT-61900 I2D: score=3 
    UBCENSP000003448184STRING: ENSP00000344818
    About this table

    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience, ApexBio, HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB)
    About This Section

    TryGeneCards Plus
    Browse Small Molecules at EMD Millipore
       Browse drugs & compounds from Enzo Life Sciences
      Browse compounds at ApexBio 

    Browse Tocris compounds for SUSD1



    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN, SwitchGear Genomics,
    Tagged/untagged cDNA clones from OriGene, GenScript, DNA2.0, Vector BioLabs, and/or Addgene, Primers from OriGene, and/or QIAGEN, Flow cytometry from eBioscience )
    About This Section

    TryGeneCards Plus

    REFSEQ mRNAs for SUSD1 gene (3 alternative transcripts): 
    NM_001282640.1  NM_001282643.1  NM_022486.4  

    Unigene Cluster for SUSD1:

    Sushi domain containing 1
    Hs.494827  [show with all ESTs]
    Unigene Representative Sequence: NM_022486
    10 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000355396 ENST00000374270(uc004bfu.3 uc010mui.3) ENST00000374264
    ENST00000475283 ENST00000529933 ENST00000415074 ENST00000528773 ENST00000532348
    ENST00000482851 ENST00000374263(uc010muj.3)
    miRNA
    Products:
         
    Block miRNA regulation of human, mouse, rat SUSD1 using miScript Target Protectors
    3 qRT-PCR Assays for microRNAs that regulate SUSD1:
    hsa-miR-582-3p hsa-miR-205 hsa-miR-589*
    SwitchGear 3'UTR luciferase reporter plasmidSUSD1 3' UTR sequence
    Inhib. RNA
    Products:
         
    OriGene RNAi products in human, mouse, rat for SUSD1
    Predesigned siRNA for gene silencing in human, mouse, rat SUSD1
    Clone
    Products:
         
    OriGene clones in human, mouse for SUSD1 (see all 8)
    OriGene ORF clones in mouse, rat for SUSD1
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
    GenScript: all cDNA clones in your preferred vector: SUSD1 (NM_022486)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for SUSD1
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SUSD1
    Primer
    Products:
        
    OriGene qPCR primer pairs and template standards for SUSD1
    OriGene qSTAR qPCR primer pairs in human, mouse for SUSD1
    Pre-validated RT2 qPCR Primer Assay in human, mouse, rat SUSD1
      QuantiTect SYBR Green Assays in human, mouse, rat SUSD1
      QuantiFast Probe-based Assays in human, mouse, rat SUSD1

    Additional mRNA sequence: 

    AK025486.1 AK056704.1 AK292868.1 AL137432.1 AY358746.1 BC021125.1 BC052314.1 BC060770.1 

    8 DOTS entries:

    DT.113617  DT.100754150  DT.101981500  DT.100008644  DT.100700652  DT.121185774  DT.121185815  DT.95314659 

    Selected AceView cDNA sequences (see all 77):

    AI393645 CA310295 CA310264 T59814 AI872123 BU556478 AA577514 AI017842 
    BQ277803 BQ000273 CB529402 AW732227 AK025486 BU931633 AA319359 AL137432 
    AI241468 CD370839 CD369666 BC052314 NM_022486 BX362255 AW338216 BG230598 

    GeneLoc Exon Structure

    Selected Alternative Splicing Database (ASD) splice patterns (SP) for SUSD1 (see all 7)    About this scheme

    ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5 ^ 6a · 6b ^ 7 ^ 8 ^ 9a · 9b ^ 10 ^ 11 ^ 12 ^ 13 ^ 14 ^ 15 ^ 16 ^ 17 ^ 18 ^ 19 ^ 20 ^ 21a · 21b
    SP1:                          -                                   -           -     -                                                                     
    SP2:                          -                                   -           -     -                                               -                     
    SP3:                          -                                   -           -     -                                         -     -                     
    SP4:                                                              -           -                                                                           
    SP5:                                                                                -                                                                     


    ECgene alternative splicing isoforms for SUSD1

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MaxQB, plus additional links to SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from QIAGEN, Primers from OriGene, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    TryGeneCards Plus

    SUSD1 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS <intensity>2/3
    CGAP TAG: CCAATAAGTT
    SUSD1 Expression
    About this image

    SUSD1 Protein expression data from MOPED1, PaxDb2 and MaxQB3    About this image

    SUSD1 Protein Expression

    SOURCE GeneReport for Unigene cluster: Hs.494827
        Custom PCR Arrays for SUSD1
    Primer
    Products:
    OriGene qPCR primer pairs and template standards for SUSD1
    OriGene qSTAR qPCR primer pairs in human, mouse for SUSD1
    Pre-validated RT2 qPCR Primer Assay in human, mouse, rat SUSD1
    QuantiTect SYBR Green Assays in human, mouse, rat SUSD1
    QuantiFast Probe-based Assays in human, mouse, rat SUSD1
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SUSD1

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    TryGeneCards Plus

    This gene was present in the common ancestor of chordates.

    Orthologs for SUSD1 gene from Selected species (see all 11)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Susd11 , 5 sushi domain containing 11, 5 80.95(n)1
    74.93(a)1
      4 (32.50 cM)5
    6347311  NM_001163288.21  NP_001156760.21 
     593146835 
    chicken
    (Gallus gallus)
    Aves SUSD11 sushi domain containing 1 58.67(n)
    50.82(a)
      427334  XM_424913.4  XP_424913.4 
    lizard
    (Anolis carolinensis)
    Reptilia SUSD16
    sushi domain containing 1
    42(a)
    1 ↔ 1
    2(57497729-57557822)
    tropical clawed frog
    (Xenopus tropicalis)
    Amphibia MGC755732 hypothetical protein MGC75573 76.06(n)    BC063189.1 
    zebrafish
    (Danio rerio)
    Actinopterygii SUSD1 (2 of 3)6
    SUSD1 (1 of 3)6
    (see all 3)
    sushi domain containing 1
    (see all 3)
    33(a)
    33(a)
    (see all 3)
    many → 1
    many → 1
    (see all 3)
    5(9641908-9678348) ENSDARG00000094311
    5(9704633-9732009) ENSDARG00000058839


    ENSEMBL Gene Tree for SUSD1 (if available)
    TreeFam Gene Tree for SUSD1 (if available)

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section

    TryGeneCards Plus
    Paralogs for SUSD1 gene
    2 SIMAP similar genes for SUSD1 using alignment to 5 protein entries:     SUSD1_HUMAN (see all proteins):
    SNED1    FBN3

    Find genes that share paralogs with SUSD1           About GenesLikeMe



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD), the Human Cytochrome P450 Allele Nomenclature Database, and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers, Cancer Mutation PCR Arrays and Assays, and Copy Number PCR Arrays from QIAGEN)
    About This Section

    TryGeneCards Plus

    Selected SNPs for SUSD1 (see all 2924)    About this table                                 

    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 9 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1381296001,2
    --114802567(+) TGGGCA/GTGGTG 1 -- int10--------
    rs1437095121,2
    C--114802586(+) CTGTGA/GTCCCA 1 -- int10--------
    rs558936591,2
    C--114802725(+) AAAAA-/AA/AAAA/AAAAAAAAAAA
    AAAA
    /AAAAAAAAAAAAAAAA
    GAGGA
    2 -- int1 cds11NA 2
    rs1877351341,2
    --114802923(+) ACATGA/GACTCT 1 -- int10--------
    rs1908141781,2
    --114803023(+) AGAAGA/GCGCTT 1 -- int10--------
    rs759469121,2
    C--114803199(+) TTCTCA/CTTAGT 1 -- ut310--------
    rs782294261,2
    C--114803201(+) CTCATG/TAGTAT 1 -- ut310--------
    rs1838658581,2
    --114803204(+) ATTAGC/TATATC 1 -- ut310--------
    rs112849561,2
    C--114803238(+) TCTAA-/AGTGCT 1 -- ut310--------
    rs22817881,2
    C,F,H--114803286(+) ATGACC/TTCCTT 1 -- ut31 ese319Minor allele frequency- T:0.18EA NA NS 3564

    HapMap Linkage Disequilibrium report for SUSD1 (114803061 - 114937688 bp)

    Structural Variations
         Database of Genomic Variants (DGV) 10 variations for SUSD1:    About this table    
    Variant IDTypeSubtypePubMed ID
    esv2675703CNV Deletion23128226
    esv2738945CNV Deletion23290073
    esv2180224CNV Deletion18987734
    esv2552622CNV Deletion19546169
    esv272517CNV Insertion20981092
    esv2555427CNV Insertion19546169
    esv268057CNV Insertion20981092
    esv1083675CNV Insertion17803354
    nsv415911CNV Loss16902084
    nsv893731CNV Gain21882294

    Site Specific Mutation Identification with PCR Assays
    SeqTarget long-range PCR primers for resequencing SUSD1
    DNA2.0 Custom Variant and Variant Library Synthesis for SUSD1

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    TryGeneCards Plus

    Find genes that share disorders with SUSD1           About GenesLikeMe

    Genetic Association Database (GAD): SUSD1
    Human Genome Epidemiology (HuGE) Navigator: SUSD1 (2 documents)

    Export disorders for SUSD1 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    TryGeneCards Plus

    PubMed articles for SUSD1 gene, integrated from 10 sources (see all 16):
    (articles sorted by number of sources associating them with SUSD1)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PubMed id 12975309)1, 2, 3 Clark H.F.... Gray A.M. (Genome Res. 2003)
    2. Follow-up association studies of chromosome region 9q and nonsyndromic cleft lip/palate. (PubMed id 20583170)1, 4 Letra A....Vieira A.R. (Am. J. Med. Genet. A 2010)
    3. Genome-wide genotyping in amyotrophic lateral sclerosis and neurologically normal controls: first stage analysis and public release of data. (PubMed id 17362836)1, 4 Schymick J.C....Traynor B.J. (Lancet Neurol 2007)
    4. Elucidation of N-glycosylation sites on human platelet proteins: a glycoproteomic approach. (PubMed id 16263699)1, 2 Lewandrowski U.... Sickmann A. (Mol. Cell. Proteomics 2006)
    5. DNA sequence and analysis of human chromosome 9. (PubMed id 15164053)1, 2 Humphray S.J.... Dunham I. (Nature 2004)
    6. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S.... Malek J. (Genome Res. 2004)
    7. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (Nat. Genet. 2004)
    8. A genome-wide association study for venous thromboembolism: the extended cohorts for heart and aging research in genomic epidemiology (CHARGE) consortium. (PubMed id 23650146)1 Tang W....Smith N.L. (Genet. Epidemiol. 2013)
    9. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PubMed id 23251661)1 Comuzzie A.G....Butte N.F. (PLoS ONE 2012)
    10. Proteomic identification of common SCF ubiquitin ligase FBXO6-interacting glycoproteins in three kinds of cells. (PubMed id 22268729)1 Liu B....Wang L.S. (J. Proteome Res. 2012)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section

    TryGeneCards Plus
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section

    TryGeneCards Plus
    Entrez Gene: 64420 HGNC: 25413 AceView: SUSD1 Ensembl:ENSG00000106868 euGenes: HUgn64420
    ECgene: SUSD1 H-InvDB: SUSD1

    (According to HUGE)
    About This Section

    TryGeneCards Plus
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL, and/or others, e.g. Wikipedia and GeneReviews, via UniProtKB/Swiss-Prot)
    About This Section

    TryGeneCards Plus
    NameDescription
    PharmGKB entry for SUSD1 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section

    TryGeneCards Plus
    Patent Information for SUSD1 gene:
    Search GeneIP for patents involving SUSD1

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Cloud-Clone Corp., Thermo Fisher Scientific, LSBio, eBioscience, and/or others, Gene Editing from DNA2.0. Clones from OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Addgene, Cell lines from GenScript, and ESI BIO, Flow cytometery from eBioscience, PCR Arrays from QIAGEN, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, Enzo Life Sciences, and/or ApexBio, In Situ Hybridization Assays from
    Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory, genOway)
    About This Section

    TryGeneCards Plus

     
     EMD Millipore genomic analysis products

      
     Browse Antibodies   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Enzyme Activity Assays/Reagents  
     Browse ELISpot/FluoroSpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Luminex Assays  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Recombinant/Natural Proteins   Browse Stem Cell Products  
     Browse cDNA Clones   Browse Proteome Profiler Antibody Arrays  
     Browse OriGene Antibodies   OriGene RNAi products in human, mouse, rat for SUSD1  
     OriGene qPCR primer pairs and template standards for SUSD1   Browse OriGene Protein Over-expression Lysates  
     OriGene MassSpec something-or-other for SUSD1   OriGene clones in human, mouse for SUSD1  
     OriGene qSTAR qPCR primer pairs in human, mouse for SUSD1   OriGene Purified Protein for SUSD1  
     OriGene ORF clones in mouse, rat for SUSD1   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for SUSD1   OriGene Custom Protein Services for SUSD1  

     
     
     Block miRNA regulation of human, mouse, rat SUSD1 using miScript Target Protectors SeqTarget long-range PCR primers for resequencing SUSD1
     DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat SUSD1 Predesigned siRNA for gene silencing in human, mouse, rat SUSD1
     QuantiFast Probe-based Assays in human, mouse, rat SUSD1 QuantiTect SYBR Green Assays in human, mouse, rat SUSD1
     Custom PCR Arrays for SUSD1 Search Chromatin IP Primers for SUSD1
     Pre-validated RT2 qPCR Primer Assay in human, mouse, rat SUSD1  Search GeneGlobe Interaction Network for SUSD1
     Regulatory tfbs in SUSD1 promoter
     GenScript Custom Purified and Recombinant Proteins Services for SUSD1 GenScript cDNA clones with any tag delivered in your preferred vector for SUSD1
     GenScript Custom Assay Services for SUSD1 GenScript Custom overexpressing Cell Line Services for SUSD1
     CloneReady with Over 120,000 Genes  Gene Synthesis: Any Gene in Any Vector
     Vector-based siRNA and miRNA, Ready for Transfection Gene Mutant Library, Variants up to 10^11
     Plasmid Preparation Custom Peptide Services
     Search for Antibodies & Assays

     Search Tocris compounds for SUSD1
     Browse Sino Biological Proteins
     Browse Sino Biological Cell Lysates
     Browse Sino Biological cDNA Clones
     4000+ Proteins
     Search Sino Biological for antibodies, proteins & pathways
     Protein Production Services
     Transfection Reagents
     Protein A/G/L resins
     Isotyping reagents
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies

     Novus Tissue Slides
     SUSD1 antibodies
     Antibodies for SUSD1
     See all of Abcam's Antibodies, Kits and Proteins for SUSD1
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins
     Proteins for SUSD1
     Antibodies for SUSD1
     ELISAs for SUSD1
     CLIAs for SUSD1



     Browse ESI BIO Cell Lines and PureStem Progenitors for SUSD1
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SUSD1
     SwitchGear 3'UTR luciferase reporter plasmids for SUSD1
     Browse SwitchGear Promoter luciferase reporter plasmids for SUSD1
     Search ThermoFisher Antibodies for SUSD1
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SUSD1
     inGenious Targeting Laboratory: Let us create your new Knockout/Knockin mouse model for SUSD1
     inGenious Targeting Laboratory: Contact us about creating complex and humanized mouse models for SUSD1
     Search LSBio for Antibodies for SUSD1
    Customized transgenic rodents for:
     Humanization
     Biomarker expression
     Off-target effect monitoring
     Translational medicine
     Tissue-specific gene expresssion
     Time-controlled gene expresssion
     Browse compounds at ApexBio
     Search Addgene for plasmids for SUSD1
      Search eBioscience for proteins for SUSD1
      Search eBioscience for elisas for SUSD1
      eBioscience FlowRNA Probe Sets
           
    GeneCards Homepage - Last full update: 7 May 2014 - Incrementals: 9 May 2014 , 2 Jun 2014 , 26 Jun 2014 , 30 Jun 2014 , 21 Aug 2014 , 8 Sep 2014

    View Random Gene

    Category
    (GIFtS: )
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      SUSD1 gene at Home site.
    Version: 3.12.224 13 Oct 2014
    hostname: 356977-web1.xennexinc.com index build: 128 solr: 1.4