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Aliases for SUPT20HL2 Gene

Aliases for SUPT20HL2 Gene

  • SPT20 Homolog, SAGA Complex Component-Like 2 2 3 5
  • Suppressor Of Ty 20 Homolog (S. Cerevisiae)-Like 2 2 3
  • Family With Sequence Similarity 48, Member B2 2 3
  • FAM48B2 3 4
  • Family With Sequence Similarity 48, Member B1 3
  • Putative Protein FAM48B2 3
  • FAM48B1 3

External Ids for SUPT20HL2 Gene

Previous HGNC Symbols for SUPT20HL2 Gene

  • FAM48B2

Summaries for SUPT20HL2 Gene

GeneCards Summary for SUPT20HL2 Gene

SUPT20HL2 (SPT20 Homolog, SAGA Complex Component-Like 2) is a Protein Coding gene. GO annotations related to this gene include transcription cofactor activity.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SUPT20HL2 Gene

Genomics for SUPT20HL2 Gene

Regulatory Elements for SUPT20HL2 Gene

Enhancers for SUPT20HL2 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around SUPT20HL2 on UCSC Golden Path with GeneCards custom track

Genomic Location for SUPT20HL2 Gene

24,310,862 bp from pter
24,313,315 bp from pter
2,454 bases
Minus strand

Genomic View for SUPT20HL2 Gene

Genes around SUPT20HL2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SUPT20HL2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SUPT20HL2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SUPT20HL2 Gene

Proteins for SUPT20HL2 Gene

  • Protein details for SUPT20HL2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative transcription factor SPT20 homolog-like 2
    Protein Accession:

    Protein attributes for SUPT20HL2 Gene

    817 amino acids
    Molecular mass:
    87541 Da
    Quaternary structure:
    No Data Available

neXtProt entry for SUPT20HL2 Gene

Proteomics data for SUPT20HL2 Gene at MOPED

Post-translational modifications for SUPT20HL2 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for SUPT20HL2 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for SUPT20HL2 Gene

Domains & Families for SUPT20HL2 Gene

Protein Domains for SUPT20HL2 Gene


Suggested Antigen Peptide Sequences for SUPT20HL2 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry



  • Belongs to the SPT20 family.
  • Belongs to the SPT20 family.
genes like me logo Genes that share domains with SUPT20HL2: view

No data available for Gene Families for SUPT20HL2 Gene

Function for SUPT20HL2 Gene

Phenotypes for SUPT20HL2 Gene

GenomeRNAi human phenotypes for SUPT20HL2:
genes like me logo Genes that share phenotypes with SUPT20HL2: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SUPT20HL2 Gene

Localization for SUPT20HL2 Gene

Gene Ontology (GO) - Cellular Components for SUPT20HL2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000124 SAGA complex IEA --
genes like me logo Genes that share ontologies with SUPT20HL2: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from COMPARTMENTS for SUPT20HL2 Gene

Pathways & Interactions for SUPT20HL2 Gene

SuperPathways for SUPT20HL2 Gene

No Data Available

Interacting Proteins for SUPT20HL2 Gene

Gene Ontology (GO) - Biological Process for SUPT20HL2 Gene


No data available for Pathways by source and SIGNOR curated interactions for SUPT20HL2 Gene

Drugs & Compounds for SUPT20HL2 Gene

No Compound Related Data Available

Transcripts for SUPT20HL2 Gene

mRNA/cDNA for SUPT20HL2 Gene

(1) REFSEQ mRNAs :
(0) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SUPT20HL2 Gene

Suppressor of Ty 20 homolog (S. cerevisiae)-like 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SUPT20HL2 Gene

No ASD Table

Relevant External Links for SUPT20HL2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SUPT20HL2 Gene

mRNA expression in normal human tissues for SUPT20HL2 Gene

mRNA differential expression in normal tissues according to GTEx for SUPT20HL2 Gene

This gene is overexpressed in Testis (x14.0), Fallopian Tube (x9.2), and Uterus (x4.6).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for SUPT20HL2 Gene

SOURCE GeneReport for Unigene cluster for SUPT20HL2 Gene Hs.716893

genes like me logo Genes that share expression patterns with SUPT20HL2: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SUPT20HL2 Gene

Orthologs for SUPT20HL2 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for SUPT20HL2 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia FAM48B2 35
  • 98.82 (n)
  • 97.8 (a)
Species with no ortholog for SUPT20HL2:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SUPT20HL2 Gene

Gene Tree for SUPT20HL2 (if available)
Gene Tree for SUPT20HL2 (if available)

Paralogs for SUPT20HL2 Gene

(3) SIMAP similar genes for SUPT20HL2 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with SUPT20HL2: view

No data available for Paralogs for SUPT20HL2 Gene

Variants for SUPT20HL2 Gene

Sequence variations from dbSNP and Humsavar for SUPT20HL2 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs747682057 -- 24,313,992(+) TTTGA(A/G)GGTTT upstream-variant-2KB
rs747829296 -- 24,312,874(+) GTAGT(C/T)ACGAA reference, missense
rs747861052 -- 24,314,034(+) CGTGG(C/T)CTGGG upstream-variant-2KB
rs747876954 -- 24,312,426(+) CACAG(G/T)GTCTG reference, missense
rs747907810 -- 24,314,259(+) AGCGT(A/G)CATGC upstream-variant-2KB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for SUPT20HL2 Gene

Disorders for SUPT20HL2 Gene

Relevant External Links for SUPT20HL2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for SUPT20HL2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SUPT20HL2 Gene

Publications for SUPT20HL2 Gene

  1. The DNA sequence of the human X chromosome. (PMID: 15772651) Ross M.T. … Bentley D.R. (Nature 2005) 3 4 67
  2. Shotgun proteomics reveals specific modulated protein patterns in tears of patients with primary open angle glaucoma naA^ve to therapy. (PMID: 23580065) Pieragostino D. … Del Boccio P. (Mol Biosyst 2013) 3

Products for SUPT20HL2 Gene

Sources for SUPT20HL2 Gene