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Aliases for SUPT16HP1 Gene

Aliases for SUPT16HP1 Gene

  • SPT16 Homolog, Facilitates Chromatin Remodeling Subunit Pseudogene 1 2 3 5
  • Suppressor Of Ty 16 Homolog (S. Cerevisiae) Pseudogene 2 3
  • Suppressor Of Ty 16 Homolog (S. Cerevisiae) Pseudogene 1 2
  • Suppressor Of Ty 16 Homolog Pseudogene 1 3
  • SUPT16HP 3
  • Bcm670 3

External Ids for SUPT16HP1 Gene

Previous HGNC Symbols for SUPT16HP1 Gene

  • SUPT16HP

Previous GeneCards Identifiers for SUPT16HP1 Gene

  • GC12M016553

Summaries for SUPT16HP1 Gene

GeneCards Summary for SUPT16HP1 Gene

SUPT16HP1 (SPT16 Homolog, Facilitates Chromatin Remodeling Subunit Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SUPT16HP1 Gene

Genomics for SUPT16HP1 Gene

Regulatory Elements for SUPT16HP1 Gene

Enhancers for SUPT16HP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12F015710 0.5 Ensembl ENCODE 49 +690.1 690064 3.3 ATF1 ZFP64 YY1 KLF7 ZNF202 ZNF263 SP5 MXD4 MIER2 REST ENSG00000261324 HIST4H4 SUPT16HP1 WBP11 H2AFJ RNU6-251P EPS8 LOC102724196 GC12M015672 ENSG00000255565
GH12F015533 1 Ensembl ENCODE 14.6 +867.3 867309 2.8 ZNF76 FEZF1 ZNF2 ZEB1 ZNF335 ZNF366 SCRT2 ZNF391 SP3 CEBPB SUPT16HP1 H2AFJ ENSG00000261324 HIST4H4 WBP11 LOC105369672 RPS2P42
GH12F015635 1.1 Ensembl ENCODE 14.6 +765.1 765148 3.3 SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF143 ZNF207 ZNF263 SP3 MXD4 ENSG00000261324 ENSG00000256953 ENSG00000256339 SUPT16HP1 H2AFJ RNU6-251P EPS8 HIST4H4 WBP11 GC12M015672
GH12F015829 1 Ensembl ENCODE 5.1 +572.0 572008 2.1 CTCF ZNF654 ZNF610 SMC3 RAD21 YY1 SUPT16HP1 STRAP ENSG00000256953 EPS8
GH12F016401 0.4 FANTOM5 0.8 +1.0 956 0.5 SUPT16HP1 GC12P016380
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around SUPT16HP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for SUPT16HP1 Gene

Chromosome:
12
Start:
16,398,875 bp from pter
End:
16,402,509 bp from pter
Size:
3,635 bases
Orientation:
Minus strand

Genomic View for SUPT16HP1 Gene

Genes around SUPT16HP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SUPT16HP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SUPT16HP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SUPT16HP1 Gene

Proteins for SUPT16HP1 Gene

Post-translational modifications for SUPT16HP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SUPT16HP1 Gene

Domains & Families for SUPT16HP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SUPT16HP1 Gene

Function for SUPT16HP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SUPT16HP1 Gene

Localization for SUPT16HP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SUPT16HP1 Gene

Pathways & Interactions for SUPT16HP1 Gene

SuperPathways for SUPT16HP1 Gene

No Data Available

Interacting Proteins for SUPT16HP1 Gene

Gene Ontology (GO) - Biological Process for SUPT16HP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SUPT16HP1 Gene

Transcripts for SUPT16HP1 Gene

mRNA/cDNA for SUPT16HP1 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SUPT16HP1 Gene

No ASD Table

Relevant External Links for SUPT16HP1 Gene

GeneLoc Exon Structure for
SUPT16HP1
ECgene alternative splicing isoforms for
SUPT16HP1

Expression for SUPT16HP1 Gene

mRNA expression in normal human tissues for SUPT16HP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of SUPT16HP1 Gene:

SUPT16HP1
genes like me logo Genes that share expression patterns with SUPT16HP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SUPT16HP1 Gene

Orthologs for SUPT16HP1 Gene

Evolution for SUPT16HP1 Gene

ENSEMBL:
Gene Tree for SUPT16HP1 (if available)
TreeFam:
Gene Tree for SUPT16HP1 (if available)

No data available for Orthologs for SUPT16HP1 Gene

Paralogs for SUPT16HP1 Gene

No data available for Paralogs for SUPT16HP1 Gene

Variants for SUPT16HP1 Gene

Relevant External Links for SUPT16HP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SUPT16HP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SUPT16HP1 Gene

Disorders for SUPT16HP1 Gene

No disorders were found for SUPT16HP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SUPT16HP1 Gene

Publications for SUPT16HP1 Gene

  1. Proteomic Analysis of the EWS-Fli-1 Interactome Reveals the Role of the Lysosome in EWS-Fli-1 Turnover. (PMID: 24999758) Elzi D.J. … Shiio Y. (J. Proteome Res. 2014) 3 64

Products for SUPT16HP1 Gene

Sources for SUPT16HP1 Gene

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