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Aliases for SUPT16HP1 Gene

Aliases for SUPT16HP1 Gene

  • SPT16 Homolog, Facilitates Chromatin Remodeling Subunit Pseudogene 1 2 3 5
  • Suppressor Of Ty 16 Homolog (S. Cerevisiae) Pseudogene 1 2
  • Suppressor Of Ty 16 Homolog (S. Cerevisiae) Pseudogene 2
  • Suppressor Of Ty 16 Homolog Pseudogene 1 3
  • Suppressor Of Ty 16 Homolog Pseudogene 3
  • SUPT16HP 3
  • Bcm670 3

External Ids for SUPT16HP1 Gene

Previous HGNC Symbols for SUPT16HP1 Gene

  • SUPT16HP

Previous GeneCards Identifiers for SUPT16HP1 Gene

  • GC12M016553

Summaries for SUPT16HP1 Gene

GeneCards Summary for SUPT16HP1 Gene

SUPT16HP1 (SPT16 Homolog, Facilitates Chromatin Remodeling Subunit Pseudogene 1) is a Pseudogene.

Additional gene information for SUPT16HP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SUPT16HP1 Gene

Genomics for SUPT16HP1 Gene

Regulatory Elements for SUPT16HP1 Gene

Enhancers for SUPT16HP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12H015710 1.5 Ensembl ENCODE dbSUPER 55.6 +690.1 690064 3.3 FOXA2 ATF1 ZFP64 YY1 KLF7 ZNF202 SP5 ZC3H11A MXD4 REST SUPT16HP1 ENSG00000261324 HIST4H4 WBP11 RNU6-251P EPS8 ENSG00000256564 GC12M015672 ENSG00000255565
GH12H015786 1.4 ENCODE dbSUPER 12.1 +614.2 614158 4.5 HDGF ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 ZNF143 ZNF207 SP3 ENSG00000256953 ENSG00000256339 SUPT16HP1 ENSG00000255565 MRPS7P2
GH12H015829 0.7 Ensembl ENCODE 5.1 +572.0 572008 2.1 ZNF610 POLR2A ZSCAN4 SUPT16HP1 STRAP ENSG00000256953 EPS8
GH12H016386 0.8 ENCODE 0.4 +16.3 16288 0.1 CTCF MXI1 FOXA2 MAX ZNF644 RAD21 YY1 TEAD3 LCORL HNF4G GC12P016380 SUPT16HP1
GH12H016401 0.3 FANTOM5 0.7 +1.0 956 0.5 SUPT16HP1 GC12P016380
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SUPT16HP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SUPT16HP1 Gene

Genomic Locations for SUPT16HP1 Gene
chr12:16,398,875-16,402,509
(GRCh38/hg38)
Size:
3,635 bases
Orientation:
Minus strand
chr12:16,552,208-16,555,438
(GRCh37/hg19)

Genomic View for SUPT16HP1 Gene

Genes around SUPT16HP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SUPT16HP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SUPT16HP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SUPT16HP1 Gene

Proteins for SUPT16HP1 Gene

Post-translational modifications for SUPT16HP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SUPT16HP1 Gene

Domains & Families for SUPT16HP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SUPT16HP1 Gene

Function for SUPT16HP1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SUPT16HP1 Gene

Localization for SUPT16HP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SUPT16HP1 Gene

Pathways & Interactions for SUPT16HP1 Gene

SuperPathways for SUPT16HP1 Gene

No Data Available

Interacting Proteins for SUPT16HP1 Gene

Gene Ontology (GO) - Biological Process for SUPT16HP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SUPT16HP1 Gene

Drugs & Compounds for SUPT16HP1 Gene

No Compound Related Data Available

Transcripts for SUPT16HP1 Gene

mRNA/cDNA for SUPT16HP1 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SUPT16HP1 Gene

No ASD Table

Relevant External Links for SUPT16HP1 Gene

GeneLoc Exon Structure for
SUPT16HP1
ECgene alternative splicing isoforms for
SUPT16HP1

Expression for SUPT16HP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SUPT16HP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of SUPT16HP1 Gene:

SUPT16HP1
genes like me logo Genes that share expression patterns with SUPT16HP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SUPT16HP1 Gene

Orthologs for SUPT16HP1 Gene

Evolution for SUPT16HP1 Gene

ENSEMBL:
Gene Tree for SUPT16HP1 (if available)
TreeFam:
Gene Tree for SUPT16HP1 (if available)

No data available for Orthologs for SUPT16HP1 Gene

Paralogs for SUPT16HP1 Gene

No data available for Paralogs for SUPT16HP1 Gene

Variants for SUPT16HP1 Gene

Relevant External Links for SUPT16HP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SUPT16HP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SUPT16HP1 Gene

Disorders for SUPT16HP1 Gene

No disorders were found for SUPT16HP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SUPT16HP1 Gene

Publications for SUPT16HP1 Gene

  1. Proteomic Analysis of the EWS-Fli-1 Interactome Reveals the Role of the Lysosome in EWS-Fli-1 Turnover. (PMID: 24999758) Elzi DJ … Shiio Y (Journal of proteome research 2014) 3 60

Products for SUPT16HP1 Gene

Sources for SUPT16HP1 Gene

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