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Aliases for SUMO2P1 Gene

Aliases for SUMO2P1 Gene

  • SUMO2 Pseudogene 1 2 3 5
  • SMT3 (Suppressor Of Mif Two 3, Yeast) Homolog 2 Pseudogene 2 3
  • SMT3 Suppressor Of Mif Two 3 Homolog 2 (S. Cerevisiae) Pseudogene 1 2
  • SMT3 Suppressor Of Mif Two 3 Homolog 2 (S. Cerevisiae) Pseudogene 2
  • SMT3 Suppressor Of Mif Two 3 Homolog 2 (Yeast) Pseudogene 2
  • SMT3 Suppressor Of Mif Two 3 Homolog 2 Pseudogene 1 3
  • DJ271M21 3
  • SMT3H2P 3
  • SMT3Bp 3
  • SUMO2P 3

External Ids for SUMO2P1 Gene

Previous HGNC Symbols for SUMO2P1 Gene

  • SMT3H2P
  • SUMO2P

Previous GeneCards Identifiers for SUMO2P1 Gene

  • GC06M029605

Summaries for SUMO2P1 Gene

GeneCards Summary for SUMO2P1 Gene

SUMO2P1 (SUMO2 Pseudogene 1) is a Pseudogene.

Additional gene information for SUMO2P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SUMO2P1 Gene

Genomics for SUMO2P1 Gene

Regulatory Elements for SUMO2P1 Gene

Enhancers for SUMO2P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H028838 1.2 ENCODE 19.9 +798.0 798025 2.2 PKNOX1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 FOS DEK TRIM27 ZKSCAN4 ZKSCAN3 ZKSCAN8 ZSCAN12 SUMO2P1 LINC01556 ZSCAN9 ZSCAN23 ZFP57
GH06H030611 1.7 Ensembl ENCODE dbSUPER 12 -979.0 -979049 8.7 MLX ZFP64 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC MEF2D SSRP1 MDC1 DDX39B TRIM39 PPP1R10 ABCF1 NRM DHX16 ZNRD1 GTF2H4 TRIM26
GH06H028863 1.1 ENCODE 18 +772.4 772405 2 HDGF PKNOX1 MLX ARNT ARID4B SIN3A FEZF1 ZNF2 YY1 SLC30A9 ZSCAN12 ZKSCAN8 ZKSCAN3 ZKSCAN4 SUMO2P1 ZSCAN9 ZNF311 ZSCAN23 ZFP57 ZNF602P
GH06H028977 1.7 Ensembl ENCODE dbSUPER 9.9 +656.1 656130 6.5 MLX DMAP1 YY1 ZNF143 SP3 NFYC MEF2D SSRP1 RCOR2 NBN ZKSCAN3 ZKSCAN4 ZKSCAN8 ZSCAN12 TRIM27 ZNF311 HLA-K ZSCAN9 ZSCAN23 ZFP57
GH06H028939 1.7 Ensembl ENCODE dbSUPER 9.9 +695.5 695471 3.1 HDGF PKNOX1 ARNT SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9 ZNF766 ZKSCAN8 ZSCAN12 ZKSCAN3 TRIM27 ZKSCAN4 ZSCAN23 ZSCAN9 ERVK9-12 HLA-H HLA-F-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SUMO2P1 on UCSC Golden Path with GeneCards custom track

Promoters for SUMO2P1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000195319 103 399

Genomic Locations for SUMO2P1 Gene

Genomic Locations for SUMO2P1 Gene
chr6:29,635,454-29,636,504
(GRCh38/hg38)
Size:
1,051 bases
Orientation:
Minus strand
chr6:29,603,231-29,604,281
(GRCh37/hg19)

Genomic View for SUMO2P1 Gene

Genes around SUMO2P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SUMO2P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SUMO2P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for SUMO2P1 Gene

Post-translational modifications for SUMO2P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SUMO2P1 Gene

Domains & Families for SUMO2P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SUMO2P1 Gene

Function for SUMO2P1 Gene

Phenotypes From GWAS Catalog for SUMO2P1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SUMO2P1 Gene

Localization for SUMO2P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SUMO2P1 Gene

Pathways & Interactions for SUMO2P1 Gene

SuperPathways for SUMO2P1 Gene

No Data Available

Interacting Proteins for SUMO2P1 Gene

Gene Ontology (GO) - Biological Process for SUMO2P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SUMO2P1 Gene

Drugs & Compounds for SUMO2P1 Gene

No Compound Related Data Available

Transcripts for SUMO2P1 Gene

mRNA/cDNA for SUMO2P1 Gene

(30) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SUMO2P1 Gene

No ASD Table

Relevant External Links for SUMO2P1 Gene

GeneLoc Exon Structure for
SUMO2P1
ECgene alternative splicing isoforms for
SUMO2P1

Expression for SUMO2P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SUMO2P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of SUMO2P1 Gene:

SUMO2P1
genes like me logo Genes that share expression patterns with SUMO2P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SUMO2P1 Gene

Orthologs for SUMO2P1 Gene

Evolution for SUMO2P1 Gene

ENSEMBL:
Gene Tree for SUMO2P1 (if available)
TreeFam:
Gene Tree for SUMO2P1 (if available)

No data available for Orthologs for SUMO2P1 Gene

Paralogs for SUMO2P1 Gene

No data available for Paralogs for SUMO2P1 Gene

Variants for SUMO2P1 Gene

Relevant External Links for SUMO2P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SUMO2P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SUMO2P1 Gene

Disorders for SUMO2P1 Gene

Relevant External Links for SUMO2P1

Genetic Association Database (GAD)
SUMO2P1

No disorders were found for SUMO2P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SUMO2P1 Gene

Publications for SUMO2P1 Gene

  1. Proteomic Analysis of the EWS-Fli-1 Interactome Reveals the Role of the Lysosome in EWS-Fli-1 Turnover. (PMID: 24999758) Elzi DJ … Shiio Y (Journal of proteome research 2014) 3 60
  2. Genome-wide association study identifies variants in the MHC class I, IL10, and IL23R-IL12RB2 regions associated with Behçet's disease. (PMID: 20622878) Remmers EF … Gül A (Nature genetics 2010) 45 60
  3. Genome-wide association study reveals multiple nasopharyngeal carcinoma-associated loci within the HLA region at chromosome 6p21.3. (PMID: 19664746) Tse KP … Shugart YY (American journal of human genetics 2009) 45 60

Products for SUMO2P1 Gene

Sources for SUMO2P1 Gene

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