Free for academic non-profit institutions. Other users need a Commercial license

Aliases for SUMO1P1 Gene

Aliases for SUMO1P1 Gene

  • SUMO1 Pseudogene 1 2 3
  • Ubiquitin-Like 2 2 3
  • Ubiquitin-Like 6 2 3
  • PIC1L 3
  • UBL2 3
  • UBL6 3

External Ids for SUMO1P1 Gene

Previous HGNC Symbols for SUMO1P1 Gene

  • UBL2
  • UBL6

Previous GeneCards Identifiers for SUMO1P1 Gene

  • GC20M051924
  • GC20M052492
  • GC20M049237

Summaries for SUMO1P1 Gene

GeneCards Summary for SUMO1P1 Gene

SUMO1P1 (SUMO1 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SUMO1P1 Gene

Genomics for SUMO1P1 Gene

Regulatory Elements for SUMO1P1 Gene

Genomic Location for SUMO1P1 Gene

Start:
53,874,498 bp from pter
End:
53,875,709 bp from pter
Size:
1,212 bases
Orientation:
Minus strand

Genomic View for SUMO1P1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SUMO1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SUMO1P1 Gene

Proteins for SUMO1P1 Gene

Post-translational modifications for SUMO1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SUMO1P1 Gene

Domains for SUMO1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SUMO1P1 Gene

Function for SUMO1P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SUMO1P1 Gene

Localization for SUMO1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SUMO1P1 Gene

Pathways for SUMO1P1 Gene

SuperPathways for SUMO1P1 Gene

No Data Available

Interacting Proteins for SUMO1P1 Gene

Gene Ontology (GO) - Biological Process for SUMO1P1 Gene

None

No data available for Pathways by source for SUMO1P1 Gene

Transcripts for SUMO1P1 Gene

mRNA/cDNA for SUMO1P1 Gene

(3) Additional mRNA sequences :
(5) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SUMO1P1 Gene

SUMO1 pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SUMO1P1 Gene

No ASD Table

Relevant External Links for SUMO1P1 Gene

GeneLoc Exon Structure for
SUMO1P1
ECgene alternative splicing isoforms for
SUMO1P1

Expression for SUMO1P1 Gene

mRNA expression in normal human tissues for SUMO1P1 Gene

mRNA differential expression in normal tissues according to GTEx for SUMO1P1 Gene

This gene is overexpressed in Testis (28.7) and Whole Blood (15.3).

SOURCE GeneReport for Unigene cluster for SUMO1P1 Gene Hs.449977

genes like me logo Genes that share expressions with SUMO1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for SUMO1P1 Gene

Orthologs for SUMO1P1 Gene

Evolution for SUMO1P1 Gene

ENSEMBL:
Gene Tree for SUMO1P1 (if available)
TreeFam:
Gene Tree for SUMO1P1 (if available)

No data available for Orthologs for SUMO1P1 Gene

Paralogs for SUMO1P1 Gene

No data available for Paralogs for SUMO1P1 Gene

Variants for SUMO1P1 Gene

Sequence variations from dbSNP and Humsavar for SUMO1P1 Gene

SNP ID Clin Chr 20 pos Sequence Context AA Info Type MAF
rs6068699 -- 53,875,535(+) TTGAA(A/G)GTTTT nc-transcript-variant
rs6068700 -- 53,875,783(+) CTAAC(C/G/T)TTTTT upstream-variant-2KB
rs6068701 -- 53,876,291(+) cctca(G/T)cctcc upstream-variant-2KB
rs6068702 -- 53,877,152(+) TGTCC(A/G)CACCT upstream-variant-2KB
rs6097643 -- 53,874,604(+) CTGTT(A/G)TATTC nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for SUMO1P1 Gene

Variant ID Type Subtype PubMed ID
esv34060 CNV Loss 18971310
dgv66n68 CNV Loss 17160897

Relevant External Links for SUMO1P1 Gene

HapMap Linkage Disequilibrium report
SUMO1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for SUMO1P1 Gene

Disorders for SUMO1P1 Gene

No disorders were found for SUMO1P1 Gene.

No data available for UniProtKB/Swiss-Prot for SUMO1P1 Gene

Publications for SUMO1P1 Gene

  1. Molecular features of human ubiquitin-like SUMO genes and their encoded proteins. (PMID: 12383504) Su H.-L. … Li S.S.-L. (Gene 2002) 2 3
  2. The ubiquitin-homology gene PIC1: characterization of mouse (Pic1) and human (UBL1) genes and pseudogenes. (PMID: 9465300) Howe K. … Solomon E. (Genomics 1998) 2 3
  3. Positional cloning of ZNF217 and NABC1: genes amplified at 20q13.2 and overexpressed in breast carcinoma. (PMID: 9671742) Collins C. … Gray J.W. (Proc. Natl. Acad. Sci. U.S.A. 1998) 3
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  5. Systematic and quantitative assessment of the ubiquitin-modified proteome. (PMID: 21906983) Kim W. … Gygi S.P. (Mol. Cell 2011) 3

Products for SUMO1P1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate SUMO1P1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for SUMO1P1
    • Block miRNA regulation of SUMO1P1 using miScript Target Protectors

    Sources for SUMO1P1 Gene

    Back to Top

    Content