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Aliases for SULT1C2P1 Gene

Aliases for SULT1C2P1 Gene

  • Sulfotransferase Family 1C Member 2 Pseudogene 1 2 3 5
  • Sulfotransferase Family, Cytosolic, 1C, Member 2 Pseudogene 1 2 3
  • SULT1C1P 3

External Ids for SULT1C2P1 Gene

Previous GeneCards Identifiers for SULT1C2P1 Gene

  • GC02P108939

Summaries for SULT1C2P1 Gene

GeneCards Summary for SULT1C2P1 Gene

SULT1C2P1 (Sulfotransferase Family 1C Member 2 Pseudogene 1) is a Pseudogene.

Additional gene information for SULT1C2P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SULT1C2P1 Gene

Genomics for SULT1C2P1 Gene

GeneHancer (GH) Regulatory Elements for SULT1C2P1 Gene

Promoters and enhancers for SULT1C2P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I108254 Enhancer 0.3 dbSUPER 4.3 -64.5 -64475 5.9 NFE2 SULT1C2 SULT1C3 LINC01594 SULT1C2P1 WASF1P1 GC02P108069
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SULT1C2P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SULT1C2P1 Gene

Genomic Locations for SULT1C2P1 Gene
chr2:108,322,238-108,353,799
(GRCh38/hg38)
Size:
31,562 bases
Orientation:
Plus strand
chr2:108,938,694-108,970,255
(GRCh37/hg19)

Genomic View for SULT1C2P1 Gene

Genes around SULT1C2P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SULT1C2P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SULT1C2P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SULT1C2P1 Gene

Proteins for SULT1C2P1 Gene

Post-translational modifications for SULT1C2P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SULT1C2P1 Gene

Domains & Families for SULT1C2P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SULT1C2P1 Gene

Function for SULT1C2P1 Gene

Phenotypes From GWAS Catalog for SULT1C2P1 Gene

Phenotypes for SULT1C2P1 Gene

GenomeRNAi human phenotypes for SULT1C2P1:
genes like me logo Genes that share phenotypes with SULT1C2P1: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SULT1C2P1 Gene

Localization for SULT1C2P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SULT1C2P1 Gene

Pathways & Interactions for SULT1C2P1 Gene

SuperPathways for SULT1C2P1 Gene

No Data Available

Interacting Proteins for SULT1C2P1 Gene

Gene Ontology (GO) - Biological Process for SULT1C2P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SULT1C2P1 Gene

Drugs & Compounds for SULT1C2P1 Gene

No Compound Related Data Available

Transcripts for SULT1C2P1 Gene

mRNA/cDNA for SULT1C2P1 Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SULT1C2P1 Gene

Sulfotransferase family, cytosolic, 1C, member 2 pseudogene 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SULT1C2P1 Gene

No ASD Table

Relevant External Links for SULT1C2P1 Gene

GeneLoc Exon Structure for
SULT1C2P1
ECgene alternative splicing isoforms for
SULT1C2P1

Expression for SULT1C2P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SULT1C2P1 Gene

mRNA differential expression in normal tissues according to GTEx for SULT1C2P1 Gene

This gene is overexpressed in Kidney - Cortex (x15.3), Stomach (x15.0), and Prostate (x4.2).

NURSA nuclear receptor signaling pathways regulating expression of SULT1C2P1 Gene:

SULT1C2P1

SOURCE GeneReport for Unigene cluster for SULT1C2P1 Gene:

Hs.447681
genes like me logo Genes that share expression patterns with SULT1C2P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SULT1C2P1 Gene

Orthologs for SULT1C2P1 Gene

Evolution for SULT1C2P1 Gene

ENSEMBL:
Gene Tree for SULT1C2P1 (if available)
TreeFam:
Gene Tree for SULT1C2P1 (if available)

No data available for Orthologs for SULT1C2P1 Gene

Paralogs for SULT1C2P1 Gene

No data available for Paralogs for SULT1C2P1 Gene

Variants for SULT1C2P1 Gene

Sequence variations from dbSNP and Humsavar for SULT1C2P1 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000060530 -- 108,344,861(+) C/T intron_variant
rs1000071400 -- 108,348,881(+) T/G intron_variant
rs1000126082 -- 108,338,739(+) AAAAAAAA/AAAAAAAAA intron_variant
rs1000320127 -- 108,332,508(+) G/C intron_variant
rs1000437470 -- 108,324,424(+) A/T intron_variant

Structural Variations from Database of Genomic Variants (DGV) for SULT1C2P1 Gene

Variant ID Type Subtype PubMed ID
dgv153e55 CNV gain 17911159
dgv4034n100 CNV gain 25217958
dgv4035n100 CNV gain 25217958
dgv4036n100 CNV gain 25217958
dgv724e199 CNV deletion 23128226
esv2720498 CNV deletion 23290073
esv2759081 CNV gain 17122850
esv3591913 CNV gain 21293372
esv3591924 CNV gain 21293372
nsv1005832 CNV gain 25217958
nsv213897 CNV deletion 16902084
nsv469774 CNV gain 16826518
nsv527491 CNV loss 19592680
nsv527686 CNV gain 19592680
nsv528319 CNV loss 19592680
nsv834327 CNV gain 17160897

Additional Variant Information for SULT1C2P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SULT1C2P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SULT1C2P1 Gene

Disorders for SULT1C2P1 Gene

Additional Disease Information for SULT1C2P1

No disorders were found for SULT1C2P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SULT1C2P1 Gene

Publications for SULT1C2P1 Gene

  1. Human cytosolic sulfotransferase database mining: identification of seven novel genes and pseudogenes. (PMID: 14676822) Freimuth RR … Weinshilboum RM (The pharmacogenomics journal 2004) 2 3 58
  2. Expression of the sulfotransferase 1C family: implications for xenobiotic toxicity. (PMID: 24028175) Runge-Morris M … Kocarek TA (Drug metabolism reviews 2013) 3 58
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for SULT1C2P1 Gene

Sources for SULT1C2P1 Gene

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