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Aliases for SULT1C2P1 Gene

Aliases for SULT1C2P1 Gene

  • Sulfotransferase Family 1C Member 2 Pseudogene 1 2 3 5
  • Sulfotransferase Family, Cytosolic, 1C, Member 2 Pseudogene 1 2 3
  • SULT1C1P 3

External Ids for SULT1C2P1 Gene

Previous GeneCards Identifiers for SULT1C2P1 Gene

  • GC02P108939

Summaries for SULT1C2P1 Gene

GeneCards Summary for SULT1C2P1 Gene

SULT1C2P1 (Sulfotransferase Family 1C Member 2 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SULT1C2P1 Gene

Genomics for SULT1C2P1 Gene

Regulatory Elements for SULT1C2P1 Gene

Enhancers for SULT1C2P1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around SULT1C2P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for SULT1C2P1 Gene

Chromosome:
2
Start:
108,322,238 bp from pter
End:
108,353,799 bp from pter
Size:
31,562 bases
Orientation:
Plus strand

Genomic View for SULT1C2P1 Gene

Genes around SULT1C2P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SULT1C2P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SULT1C2P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SULT1C2P1 Gene

Proteins for SULT1C2P1 Gene

Post-translational modifications for SULT1C2P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SULT1C2P1 Gene

Domains & Families for SULT1C2P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SULT1C2P1 Gene

Function for SULT1C2P1 Gene

Phenotypes for SULT1C2P1 Gene

GenomeRNAi human phenotypes for SULT1C2P1:
genes like me logo Genes that share phenotypes with SULT1C2P1: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SULT1C2P1 Gene

Localization for SULT1C2P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SULT1C2P1 Gene

Pathways & Interactions for SULT1C2P1 Gene

SuperPathways for SULT1C2P1 Gene

No Data Available

Interacting Proteins for SULT1C2P1 Gene

Gene Ontology (GO) - Biological Process for SULT1C2P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SULT1C2P1 Gene

Drugs & Compounds for SULT1C2P1 Gene

No Compound Related Data Available

Transcripts for SULT1C2P1 Gene

mRNA/cDNA for SULT1C2P1 Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SULT1C2P1 Gene

Sulfotransferase family, cytosolic, 1C, member 2 pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SULT1C2P1 Gene

No ASD Table

Relevant External Links for SULT1C2P1 Gene

GeneLoc Exon Structure for
SULT1C2P1
ECgene alternative splicing isoforms for
SULT1C2P1

Expression for SULT1C2P1 Gene

mRNA expression in normal human tissues for SULT1C2P1 Gene

mRNA differential expression in normal tissues according to GTEx for SULT1C2P1 Gene

This gene is overexpressed in Kidney - Cortex (x15.3), Stomach (x15.0), and Prostate (x4.2).

SOURCE GeneReport for Unigene cluster for SULT1C2P1 Gene Hs.447681

genes like me logo Genes that share expression patterns with SULT1C2P1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SULT1C2P1 Gene

Orthologs for SULT1C2P1 Gene

Evolution for SULT1C2P1 Gene

ENSEMBL:
Gene Tree for SULT1C2P1 (if available)
TreeFam:
Gene Tree for SULT1C2P1 (if available)

No data available for Orthologs for SULT1C2P1 Gene

Paralogs for SULT1C2P1 Gene

No data available for Paralogs for SULT1C2P1 Gene

Variants for SULT1C2P1 Gene

Sequence variations from dbSNP and Humsavar for SULT1C2P1 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs730631 -- 108,334,376(+) AGCAG(G/T)TTCCT intron-variant
rs896889 -- 108,335,131(+) tccta(C/T)gtctc intron-variant
rs1879493 -- 108,322,032(+) CACTA(C/T)GGAGG upstream-variant-2KB
rs1879494 -- 108,322,059(+) TCTCA(A/C)GAGTA upstream-variant-2KB
rs1879495 -- 108,322,096(+) ATGCT(G/T)AAGAT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SULT1C2P1 Gene

Variant ID Type Subtype PubMed ID
esv2720498 CNV Deletion 23290073
dgv1233e1 CNV Complex 17122850
dgv1234e1 CNV Complex 17122850
dgv724e199 CNV Deletion 23128226
nsv874769 CNV Gain 21882294
nsv874770 CNV Loss 21882294
nsv527686 CNV Gain 19592680
dgv153e55 CNV Gain 17911159
nsv527491 CNV Loss 19592680
nsv834327 CNV Gain 17160897
nsv469774 CNV Complex 16826518
nsv528319 CNV Loss 19592680
nsv213897 CNV Loss 16902084

Relevant External Links for SULT1C2P1 Gene

HapMap Linkage Disequilibrium report
SULT1C2P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SULT1C2P1 Gene

Disorders for SULT1C2P1 Gene

Relevant External Links for SULT1C2P1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SULT1C2P1

No disorders were found for SULT1C2P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SULT1C2P1 Gene

Publications for SULT1C2P1 Gene

  1. Human cytosolic sulfotransferase database mining: identification of seven novel genes and pseudogenes. (PMID: 14676822) Freimuth R.R. … Weinshilboum R.M. (Pharmacogenomics J. 2004) 2 3 67
  2. Expression of the sulfotransferase 1C family: implications for xenobiotic toxicity. (PMID: 24028175) Runge-Morris M. … Kocarek T.A. (Drug Metab. Rev. 2013) 3
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for SULT1C2P1 Gene

Sources for SULT1C2P1 Gene

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