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Aliases for SULT1B1 Gene

Aliases for SULT1B1 Gene

  • Sulfotransferase Family 1B Member 1 2 3 5
  • Sulfotransferase Family, Cytosolic, 1B, Member 1 2 3
  • Thyroid Hormone Sulfotransferase 3 4
  • Sulfotransferase 1B1 3 4
  • Sulfotransferase 1B2 3 4
  • SULT1B2 3 4
  • ST1B1 3 4
  • ST1B2 3 4
  • Sulfotransferase Family Cytosolic 1B Member 1 3
  • EC 2.8.2.1 58
  • EC 2.8.2.4 58
  • EC 2.8.2.- 4
  • EC 2.8.2 58

External Ids for SULT1B1 Gene

Previous GeneCards Identifiers for SULT1B1 Gene

  • GC04M070507
  • GC04M070641
  • GC04M070842
  • GC04M070909
  • GC04M070910
  • GC04M070773
  • GC04M066390
  • GC04M070586

Summaries for SULT1B1 Gene

Entrez Gene Summary for SULT1B1 Gene

  • Sulfotransferase enzymes catalyze the sulfate conjugation of many hormones, neurotransmitters, drugs, and xenobiotic compounds. These cytosolic enzymes are different in their tissue distributions and substrate specificities. The gene structure (number and length of exons) is similar among family members. However, the total genomic length of this gene is greater than that of other SULT1 genes. [provided by RefSeq, Jul 2008]

GeneCards Summary for SULT1B1 Gene

SULT1B1 (Sulfotransferase Family 1B Member 1) is a Protein Coding gene. Among its related pathways are Metabolism and Cytochrome P450 - arranged by substrate type. GO annotations related to this gene include sulfotransferase activity and aryl sulfotransferase activity. An important paralog of this gene is SULT1E1.

UniProtKB/Swiss-Prot for SULT1B1 Gene

  • Sulfotransferase that utilizes 3-phospho-5-adenylyl sulfate (PAPS) as sulfonate donor to catalyze the sulfate conjugation of many hormones, neurotransmitters, drugs and xenobiotic compounds. Sulfonation increases the water solubility of most compounds, and therefore their renal excretion, but it can also result in bioactivation to form active metabolites. Sulfates dopamine, small phenols such as 1-naphthol and p-nitrophenol and thyroid hormones, including 3,3-diiodothyronine, triidothyronine, reverse triiodothyronine and thyroxine.

Gene Wiki entry for SULT1B1 Gene

Additional gene information for SULT1B1 Gene

No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SULT1B1 Gene

Genomics for SULT1B1 Gene

Regulatory Elements for SULT1B1 Gene

Enhancers for SULT1B1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04H069829 1.9 FANTOM5 Ensembl ENCODE dbSUPER 23.3 -44.2 -44219 5 FOXA2 ATF1 MLX ARID4B DMAP1 YY1 TCF12 ATF7 RUNX3 ZHX2 SULT1B1 SULT1E1 CSN1S1 UGT2A2 GC04M069835 SULT1D1P
GH04H069757 1.5 FANTOM5 Ensembl ENCODE dbSUPER 25.4 +28.5 28458 3 FOXA2 TAF1 MAX CEBPG RAD21 YY1 POLR2A HNF4G NFE2 REST SULT1B1 CSN1S1 GC04P069761 UGT2A1
GH04H069713 1.2 FANTOM5 Ensembl 22.1 +74.2 74200 0 ELF3 FOXA2 MLX ARID4B RAD21 RARA YY1 HSF1 ATF7 MIXL1 SULT1B1 CSN1S1 GC04P069761 UGT2A1
GH04H069754 1.1 ENCODE dbSUPER 20 +32.1 32072 2 SOX13 FOXA2 ATF1 SAP130 MAX CEBPG ZNF644 RAD21 YY1 TEAD3 SULT1B1 CSN1S1 GC04P069761 UGT2A1
GH04H069822 1.5 Ensembl ENCODE dbSUPER 7.2 -35.7 -35668 2 FOXA2 ATF1 MLX DMAP1 YY1 ZNF143 SP5 NFYC REST MIER2 CSN1S1 SULT1B1 SULT1D1P GC04M069835
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SULT1B1 on UCSC Golden Path with GeneCards custom track

Genomic Location for SULT1B1 Gene

Chromosome:
4
Start:
69,721,162 bp from pter
End:
69,787,961 bp from pter
Size:
66,800 bases
Orientation:
Minus strand

Genomic View for SULT1B1 Gene

Genes around SULT1B1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SULT1B1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SULT1B1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SULT1B1 Gene

Proteins for SULT1B1 Gene

  • Protein details for SULT1B1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    O43704-ST1B1_HUMAN
    Recommended name:
    Sulfotransferase family cytosolic 1B member 1
    Protein Accession:
    O43704
    Secondary Accessions:
    • O15497
    • Q96FI1
    • Q9UK34

    Protein attributes for SULT1B1 Gene

    Size:
    296 amino acids
    Molecular mass:
    34899 Da
    Quaternary structure:
    • Monomer.

    Three dimensional structures from OCA and Proteopedia for SULT1B1 Gene

neXtProt entry for SULT1B1 Gene

Selected DME Specific Peptides for SULT1B1 Gene

O43704:
  • FTVAQNE
  • PKSGTTW
  • SPFMRKG
  • YEDMKENPK
  • GDWKNYFT
  • SFWENNCK
  • SPRIVKTHLP

Post-translational modifications for SULT1B1 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for SULT1B1 Gene

Antibody Products

  • R&D Systems Antibodies for SULT1B1 (Cytosolic Sulfotransferase 1B1/SULT1B1)

Domains & Families for SULT1B1 Gene

Gene Families for SULT1B1 Gene

HGNC:
Human Protein Atlas (HPA):
  • Plasma proteins
  • Predicted intracellular proteins

Protein Domains for SULT1B1 Gene

Suggested Antigen Peptide Sequences for SULT1B1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

O43704

UniProtKB/Swiss-Prot:

ST1B1_HUMAN :
  • Belongs to the sulfotransferase 1 family.
Family:
  • Belongs to the sulfotransferase 1 family.
genes like me logo Genes that share domains with SULT1B1: view

Function for SULT1B1 Gene

Molecular function for SULT1B1 Gene

UniProtKB/Swiss-Prot Function:
Sulfotransferase that utilizes 3-phospho-5-adenylyl sulfate (PAPS) as sulfonate donor to catalyze the sulfate conjugation of many hormones, neurotransmitters, drugs and xenobiotic compounds. Sulfonation increases the water solubility of most compounds, and therefore their renal excretion, but it can also result in bioactivation to form active metabolites. Sulfates dopamine, small phenols such as 1-naphthol and p-nitrophenol and thyroid hormones, including 3,3-diiodothyronine, triidothyronine, reverse triiodothyronine and thyroxine.

Enzyme Numbers (IUBMB) for SULT1B1 Gene

Phenotypes From GWAS Catalog for SULT1B1 Gene

Gene Ontology (GO) - Molecular Function for SULT1B1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004062 aryl sulfotransferase activity TAS --
GO:0005515 protein binding IPI 21044950
GO:0008146 sulfotransferase activity IDA,IEA 9463486
GO:0016740 transferase activity IEA --
genes like me logo Genes that share ontologies with SULT1B1: view
genes like me logo Genes that share phenotypes with SULT1B1: view

Animal Models for SULT1B1 Gene

MGI Knock Outs for SULT1B1:

Animal Model Products

CRISPR Products

miRNA for SULT1B1 Gene

miRTarBase miRNAs that target SULT1B1

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for SULT1B1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for SULT1B1 Gene

Localization for SULT1B1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for SULT1B1 Gene

Cytoplasm.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for SULT1B1 gene
Compartment Confidence
cytosol 5
plasma membrane 2
nucleus 2
mitochondrion 1

Subcellular locations from the

Human Protein Atlas (HPA)
  • Golgi apparatus (2)
  • Nucleoplasm (2)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for SULT1B1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IEA --
GO:0005829 cytosol TAS --
genes like me logo Genes that share ontologies with SULT1B1: view

Pathways & Interactions for SULT1B1 Gene

genes like me logo Genes that share pathways with SULT1B1: view

Pathways by source for SULT1B1 Gene

Gene Ontology (GO) - Biological Process for SULT1B1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006068 ethanol catabolic process IDA 23207770
GO:0006576 cellular biogenic amine metabolic process TAS 9443824
GO:0006629 lipid metabolic process IEA --
GO:0006805 xenobiotic metabolic process IEA,IDA 20056724
GO:0008202 steroid metabolic process IEA --
genes like me logo Genes that share ontologies with SULT1B1: view

No data available for SIGNOR curated interactions for SULT1B1 Gene

Drugs & Compounds for SULT1B1 Gene

(4) Drugs for SULT1B1 Gene - From: DrugBank and Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Adenosine-3'-5'-Diphosphate Experimental Pharma Target 0
genes like me logo Genes that share compounds with SULT1B1: view

Transcripts for SULT1B1 Gene

mRNA/cDNA for SULT1B1 Gene

(5) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(8) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SULT1B1 Gene

Sulfotransferase family, cytosolic, 1B, member 1:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for SULT1B1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for SULT1B1 Gene

No ASD Table

Relevant External Links for SULT1B1 Gene

GeneLoc Exon Structure for
SULT1B1
ECgene alternative splicing isoforms for
SULT1B1

Expression for SULT1B1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SULT1B1 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for SULT1B1 Gene

This gene is overexpressed in Whole Blood (x19.7), Colon - Transverse (x9.4), and Liver (x4.0).

Protein differential expression in normal tissues from HIPED for SULT1B1 Gene

This gene is overexpressed in Gallbladder (12.0), Fetal gut (11.5), Rectum (9.0), and Colon (8.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for SULT1B1 Gene



NURSA nuclear receptor signaling pathways regulating expression of SULT1B1 Gene:

SULT1B1

SOURCE GeneReport for Unigene cluster for SULT1B1 Gene:

Hs.129742

mRNA Expression by UniProt/SwissProt for SULT1B1 Gene:

O43704-ST1B1_HUMAN
Tissue specificity: Highly expressed in the liver, peripheral blood leukocytes, colon (mucosal lining), small intestine (jejunum) and spleen. A lesser expression was observed in the lung, placenta and thymus.

Evidence on tissue expression from TISSUES for SULT1B1 Gene

  • Liver(4.6)
  • Bone marrow(4)
  • Intestine(2.4)
genes like me logo Genes that share expression patterns with SULT1B1: view

Primer Products

No data available for Protein tissue co-expression partners and Phenotype-based relationships between genes and organs from Gene ORGANizer for SULT1B1 Gene

Orthologs for SULT1B1 Gene

This gene was present in the common ancestor of animals.

Orthologs for SULT1B1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SULT1B1 33 34
  • 99.1 (n)
dog
(Canis familiaris)
Mammalia SULT1B1 33 34
  • 87.05 (n)
cow
(Bos Taurus)
Mammalia SULT1B1 33 34
  • 86.82 (n)
mouse
(Mus musculus)
Mammalia Sult1b1 33 16 34
  • 80.29 (n)
rat
(Rattus norvegicus)
Mammalia Sult1b1 33
  • 79.28 (n)
platypus
(Ornithorhynchus anatinus)
Mammalia SULT1B1 34
  • 67 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia -- 34
  • 64 (a)
OneToMany
-- 34
  • 35 (a)
OneToMany
chicken
(Gallus gallus)
Aves SULT1B1 33 34
  • 62.28 (n)
-- 34
  • 59 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia SULT1B1 34
  • 53 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia LOC779590 33
  • 63.74 (n)
Str.12317 33
zebrafish
(Danio rerio)
Actinopterygii sult1st2 33
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP010987 33
  • 45.51 (n)
fruit fly
(Drosophila melanogaster)
Insecta St1 33
  • 44.89 (n)
CG5428 35
  • 33 (a)
CG6704 35
  • 31 (a)
CG16733 35
  • 29 (a)
worm
(Caenorhabditis elegans)
Secernentea ssu-1 33
  • 51.42 (n)
Y113G7A.11 35
  • 32 (a)
Species where no ortholog for SULT1B1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for SULT1B1 Gene

ENSEMBL:
Gene Tree for SULT1B1 (if available)
TreeFam:
Gene Tree for SULT1B1 (if available)

Paralogs for SULT1B1 Gene

(13) SIMAP similar genes for SULT1B1 Gene using alignment to 3 proteins:

Pseudogenes.org Pseudogenes for SULT1B1 Gene

genes like me logo Genes that share paralogs with SULT1B1: view

Variants for SULT1B1 Gene

Sequence variations from dbSNP and Humsavar for SULT1B1 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs1000159891 -- 69,752,056(+) TGTTT(A/G)AGAAC intron-variant
rs1000177292 -- 69,728,028(+) ACATT(C/T)CTATA intron-variant
rs1000327752 -- 69,760,525(+) CCATG(C/G)GAAAC utr-variant-5-prime
rs1000438930 -- 69,730,985(+) TTAAA(C/G)ATAGT intron-variant
rs1000458916 -- 69,754,375(+) GGAAC(C/T)TACTA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for SULT1B1 Gene

Variant ID Type Subtype PubMed ID
nsv594641 CNV loss 21841781

Variation tolerance for SULT1B1 Gene

Residual Variation Intolerance Score: 70.3% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 3.39; 54.20% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for SULT1B1 Gene

Human Gene Mutation Database (HGMD)
SULT1B1
SNPedia medical, phenotypic, and genealogical associations of SNPs for
SULT1B1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for SULT1B1 Gene

Disorders for SULT1B1 Gene

Relevant External Links for SULT1B1

Genetic Association Database (GAD)
SULT1B1
Human Genome Epidemiology (HuGE) Navigator
SULT1B1
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SULT1B1

No disorders were found for SULT1B1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SULT1B1 Gene

Publications for SULT1B1 Gene

  1. Molecular cloning and characterization of rat ST1B1 and human ST1B2 cDNAs, encoding thyroid hormone sulfotransferases. (PMID: 9443824) Fujita K … Yamazoe Y (Journal of biochemistry 1997) 2 3 4 22 60
  2. Structure and localization of the human SULT1B1 gene: neighborhood to SULT1E1 and a SULT1D pseudogene. (PMID: 11688987) Meinl W … Glatt H (Biochemical and biophysical research communications 2001) 2 3 22 60
  3. Association study between single-nucleotide polymorphisms in 199 drug-related genes and commonly measured quantitative traits of 752 healthy Japanese subjects. (PMID: 19343046) Saito A … Kamatani N (Journal of human genetics 2009) 3 45 60
  4. Genetic variants in TPMT and COMT are associated with hearing loss in children receiving cisplatin chemotherapy. (PMID: 19898482) Ross CJ … CPNDS Consortium (Nature genetics 2009) 3 45 60
  5. Crystal structures of human sulfotransferases SULT1B1 and SULT1C1 complexed with the cofactor product adenosine-3'- 5'-diphosphate (PAP). (PMID: 16804942) Dombrovski L … Plotnikov AN (Proteins 2006) 3 4 60

Products for SULT1B1 Gene

Sources for SULT1B1 Gene

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