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Aliases for SUGT1P3 Gene

Aliases for SUGT1P3 Gene

  • SGT1 Homolog, MIS12 Kinetochore Complex Assembly Cochaperone Pseudogene 3 2 3 5
  • SUGT1 Pseudogene 3 2 3
  • SGT1, Suppressor Of G2 Allele Of SKP1 Like 1 (S. Cerevisiae) 2
  • Suppressor Of G2 Allele Of SKP1 (S. Cerevisiae) Pseudogene 3 2
  • SGT1, Suppressor Of G2 Allele Of SKP1 Like 1 3
  • Suppressor Of G2 Allele Of SKP1 Pseudogene 3 3
  • SUGT1L1 3

External Ids for SUGT1P3 Gene

Previous HGNC Symbols for SUGT1P3 Gene

  • SUGT1L1

Previous GeneCards Identifiers for SUGT1P3 Gene

  • GC13M022171
  • GC13M041372
  • GC13M041483

Summaries for SUGT1P3 Gene

GeneCards Summary for SUGT1P3 Gene

SUGT1P3 (SGT1 Homolog, MIS12 Kinetochore Complex Assembly Cochaperone Pseudogene 3) is a Pseudogene.

Additional gene information for SUGT1P3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SUGT1P3 Gene

Genomics for SUGT1P3 Gene

GeneHancer (GH) Regulatory Elements for SUGT1P3 Gene

Promoters and enhancers for SUGT1P3 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13I040920 Promoter/Enhancer 1.7 Ensembl ENCODE 550.8 +0.0 16 3 HDGF PKNOX1 FOXA2 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF213 ZNF207 SUGT1P3 TPTE2P5 NAA16 WBP4 CYCSP34 SLC25A15
GH13I040770 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 10.9 +150.7 150677 1.9 FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 NFYC MRPS31 KBTBD6 LINC00548 ELF1 FOXO1 SUGT1P3 NAA16 SLC25A15 ENSG00000277794
GH13I040972 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 4.8 -58.0 -57950 15.1 PKNOX1 ATF1 FOXA2 ARNT FEZF1 YY1 TCF12 ZNF143 ATF7 RUNX3 ELF1 WBP4 CYCSP34 SUGT1P3 RGCC NAA16 FOXO1 RGS17P1 PIR56183
GH13I040894 Enhancer 0.8 ENCODE 13.3 +25.9 25925 2.8 ELF3 FOXA2 RARA ATF7 CREM THAP11 PPARG NFIL3 CEBPA HNF4A SUGT1P3 TPTE2P5 MRPS31 GC13P040904 PIR47174
GH13I040942 Enhancer 0.5 dbSUPER 17.7 -24.2 -24205 6.6 PRDM6 POLR2A FEZF1 ATF2 SUGT1P3 TPTE2P5 CYCSP34 WBP4 PIR56183 ELF1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SUGT1P3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SUGT1P3 Gene

Genomic Locations for SUGT1P3 Gene
39,198 bases
Minus strand

Genomic View for SUGT1P3 Gene

Genes around SUGT1P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SUGT1P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SUGT1P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SUGT1P3 Gene

Proteins for SUGT1P3 Gene

Post-translational modifications for SUGT1P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SUGT1P3 Gene

Domains & Families for SUGT1P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SUGT1P3 Gene

Function for SUGT1P3 Gene

Phenotypes From GWAS Catalog for SUGT1P3 Gene

Phenotypes for SUGT1P3 Gene

GenomeRNAi human phenotypes for SUGT1P3:
genes like me logo Genes that share phenotypes with SUGT1P3: view

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SUGT1P3 Gene

Localization for SUGT1P3 Gene

Subcellular locations from

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for SUGT1P3 gene
Compartment Confidence
nucleus 2
cytosol 2
extracellular 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SUGT1P3 Gene

Pathways & Interactions for SUGT1P3 Gene

SuperPathways for SUGT1P3 Gene

No Data Available

Interacting Proteins for SUGT1P3 Gene

Gene Ontology (GO) - Biological Process for SUGT1P3 Gene


No data available for Pathways by source and SIGNOR curated interactions for SUGT1P3 Gene

Drugs & Compounds for SUGT1P3 Gene

No Compound Related Data Available

Transcripts for SUGT1P3 Gene

mRNA/cDNA for SUGT1P3 Gene

(1) Additional mRNA sequences :
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SUGT1P3 Gene

Suppressor of G2 allele of SKP1 (S. cerevisiae) pseudogene 3:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SUGT1P3 Gene

No ASD Table

Relevant External Links for SUGT1P3 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SUGT1P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SUGT1P3 Gene

mRNA differential expression in normal tissues according to GTEx for SUGT1P3 Gene

This gene is overexpressed in Brain - Nucleus accumbens (basal ganglia) (x4.9).

NURSA nuclear receptor signaling pathways regulating expression of SUGT1P3 Gene:


SOURCE GeneReport for Unigene cluster for SUGT1P3 Gene:

genes like me logo Genes that share expression patterns with SUGT1P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SUGT1P3 Gene

Orthologs for SUGT1P3 Gene

Evolution for SUGT1P3 Gene

Gene Tree for SUGT1P3 (if available)
Gene Tree for SUGT1P3 (if available)

No data available for Orthologs for SUGT1P3 Gene

Paralogs for SUGT1P3 Gene

No data available for Paralogs for SUGT1P3 Gene

Variants for SUGT1P3 Gene

Sequence variations from dbSNP and Humsavar for SUGT1P3 Gene

SNP ID Clin Chr 13 pos Variation AA Info Type
rs1000431335 -- 40,914,244(-) T/G intron_variant
rs1000529109 -- 40,921,347(-) G/C intron_variant
rs1001920949 -- 40,921,890(-) C/A upstream_transcript_variant
rs1002771279 -- 40,922,826(-) T/G upstream_transcript_variant
rs1002866272 -- 40,916,411(-) A/G intron_variant

Structural Variations from Database of Genomic Variants (DGV) for SUGT1P3 Gene

Variant ID Type Subtype PubMed ID
nsv974083 CNV duplication 23825009

Additional Variant Information for SUGT1P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SUGT1P3 Gene

Disorders for SUGT1P3 Gene

Additional Disease Information for SUGT1P3

No disorders were found for SUGT1P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SUGT1P3 Gene

Publications for SUGT1P3 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for SUGT1P3 Gene

Sources for SUGT1P3 Gene

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