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Aliases for SUGT1P1 Gene

Aliases for SUGT1P1 Gene

  • SGT1 Homolog, MIS12 Kinetochore Complex Assembly Cochaperone Pseudogene 1 2 3
  • SUGT1 Pseudogene 1 2 3
  • SUGT1P 3 5
  • BA255A11.10 (Putative Novel T Cell Receptor Beta Chain V Region Protein) 3
  • Suppressor Of G2 Allele Of SKP1 Pseudogene 1 (S. Cerevisiae) 2
  • Suppressor Of G2 Allele Of SKP1 (S. Cerevisiae) Pseudogene 1 2
  • Suppressor Of G2 Allele Of SKP1 Pseudogene (S. Cerevisiae) 2
  • Suppressor Of G2 Allele Of SKP1 Pseudogene 1 3
  • BA255A11.1 3
  • SGT1P 3

External Ids for SUGT1P1 Gene

Previous HGNC Symbols for SUGT1P1 Gene

  • SUGT1P

Summaries for SUGT1P1 Gene

GeneCards Summary for SUGT1P1 Gene

SUGT1P1 (SGT1 Homolog, MIS12 Kinetochore Complex Assembly Cochaperone Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SUGT1P1 Gene

Genomics for SUGT1P1 Gene

Regulatory Elements for SUGT1P1 Gene

Promoters for SUGT1P1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around SUGT1P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for SUGT1P1 Gene

Chromosome:
9
Start:
33,500,756 bp from pter
End:
33,511,166 bp from pter
Size:
10,411 bases
Orientation:
Minus strand

Genomic View for SUGT1P1 Gene

Genes around SUGT1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SUGT1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SUGT1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SUGT1P1 Gene

Proteins for SUGT1P1 Gene

Post-translational modifications for SUGT1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SUGT1P1 Gene

Domains & Families for SUGT1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SUGT1P1 Gene

Function for SUGT1P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SUGT1P1 Gene

Localization for SUGT1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SUGT1P1 Gene

Pathways & Interactions for SUGT1P1 Gene

SuperPathways for SUGT1P1 Gene

No Data Available

Interacting Proteins for SUGT1P1 Gene

Gene Ontology (GO) - Biological Process for SUGT1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SUGT1P1 Gene

Drugs & Compounds for SUGT1P1 Gene

No Compound Related Data Available

Transcripts for SUGT1P1 Gene

mRNA/cDNA for SUGT1P1 Gene

(1) Additional mRNA sequences :
(5) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SUGT1P1 Gene

Suppressor of G2 allele of SKP1 (S. cerevisiae) pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SUGT1P1 Gene

No ASD Table

Relevant External Links for SUGT1P1 Gene

GeneLoc Exon Structure for
SUGT1P1
ECgene alternative splicing isoforms for
SUGT1P1

Expression for SUGT1P1 Gene

mRNA expression in normal human tissues for SUGT1P1 Gene

mRNA differential expression in normal tissues according to GTEx for SUGT1P1 Gene

This gene is overexpressed in Testis (x9.7).

SOURCE GeneReport for Unigene cluster for SUGT1P1 Gene Hs.521441

genes like me logo Genes that share expression patterns with SUGT1P1: view

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SUGT1P1 Gene

Orthologs for SUGT1P1 Gene

Evolution for SUGT1P1 Gene

ENSEMBL:
Gene Tree for SUGT1P1 (if available)
TreeFam:
Gene Tree for SUGT1P1 (if available)

No data available for Orthologs for SUGT1P1 Gene

Paralogs for SUGT1P1 Gene

No data available for Paralogs for SUGT1P1 Gene

Variants for SUGT1P1 Gene

Sequence variations from dbSNP and Humsavar for SUGT1P1 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs3209220 -- 33,512,962(-) TCAAA(A/G/T)AATAA upstream-variant-2KB
rs4097291 -- 33,502,907(+) tggca(C/T)gattt intron-variant
rs2380772 -- 33,510,914(+) ACCTA(A/G)CGCTC nc-transcript-variant
rs3814514 -- 33,510,878(-) GAAAC(C/T)GGGGA nc-transcript-variant
rs7032025 -- 33,503,583(+) AAACA(C/T)ACCAA intron-variant

Relevant External Links for SUGT1P1 Gene

HapMap Linkage Disequilibrium report
SUGT1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SUGT1P1 Gene

Disorders for SUGT1P1 Gene

Relevant External Links for SUGT1P1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SUGT1P1

No disorders were found for SUGT1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SUGT1P1 Gene

Publications for SUGT1P1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 67
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for SUGT1P1 Gene

Sources for SUGT1P1 Gene

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