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Aliases for SUGT1P1 Gene

Aliases for SUGT1P1 Gene

  • SGT1 Homolog, MIS12 Kinetochore Complex Assembly Cochaperone Pseudogene 1 2 3 5
  • SUGT1 Pseudogene 1 2 3
  • BA255A11.10 (Putative Novel T Cell Receptor Beta Chain V Region Protein) 3
  • Suppressor Of G2 Allele Of SKP1 Pseudogene 1 (S. Cerevisiae) 2
  • Suppressor Of G2 Allele Of SKP1 (S. Cerevisiae) Pseudogene 1 2
  • Suppressor Of G2 Allele Of SKP1 Pseudogene (S. Cerevisiae) 2
  • Suppressor Of G2 Allele Of SKP1 Pseudogene 1 3
  • BA255A11.1 3
  • SUGT1P 3
  • SGT1P 3

External Ids for SUGT1P1 Gene

Previous HGNC Symbols for SUGT1P1 Gene

  • SUGT1P

Summaries for SUGT1P1 Gene

GeneCards Summary for SUGT1P1 Gene

SUGT1P1 (SGT1 Homolog, MIS12 Kinetochore Complex Assembly Cochaperone Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SUGT1P1 Gene

Genomics for SUGT1P1 Gene

Regulatory Elements for SUGT1P1 Gene

Enhancers for SUGT1P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09G033455 1.3 Ensembl ENCODE dbSUPER 5.4 +53.3 53257 4.1 GATA2 ELK1 RCOR1 ETV6 FOS CREM ELK4 USF2 JUNB ZEB2 AQP7 NOL6 AQP3 LOC105376020 CHMP5 BAG1 SUGT1P1 PTENP1 GC09P033453 MIR6851
GH09G033426 0.8 ENCODE 6 +84.2 84153 1.2 ESRRA PKNOX1 JUN FOSL1 GATA3 CTBP1 EGR1 FOS NR2F6 MAZ AQP3 SUGT1P1 NOL6 PIR43065
GH09G033466 0.7 ENCODE 4.7 +44.4 44359 0.2 HDGF CTCF RB1 MAX ARID4B ZNF2 RAD21 ZNF143 SMC3 NR2F6 AQP7 LOC105376020 NFX1 CYP4F26P SUGT1P1 MIR6851 GC09P033453
GH09G033510 1 ENCODE 0.7 +0.1 114 1.9 PKNOX1 ATF1 CREB3L1 SIN3A DMAP1 FEZF1 ZNF2 ZNF48 YY1 ZNF121 ANKRD18B PRSS3 SUGT1P1 PIR50034
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SUGT1P1 on UCSC Golden Path with GeneCards custom track

Promoters for SUGT1P1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000234410 66 1001 PKNOX1 ATF1 CREB3L1 SIN3A DMAP1 FEZF1 ZNF2 ZNF48 YY1 GLIS2

Genomic Location for SUGT1P1 Gene

Chromosome:
9
Start:
33,500,756 bp from pter
End:
33,511,166 bp from pter
Size:
10,411 bases
Orientation:
Minus strand

Genomic View for SUGT1P1 Gene

Genes around SUGT1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SUGT1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SUGT1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SUGT1P1 Gene

Proteins for SUGT1P1 Gene

Post-translational modifications for SUGT1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SUGT1P1 Gene

Domains & Families for SUGT1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SUGT1P1 Gene

Function for SUGT1P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SUGT1P1 Gene

Localization for SUGT1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SUGT1P1 Gene

Pathways & Interactions for SUGT1P1 Gene

SuperPathways for SUGT1P1 Gene

No Data Available

Interacting Proteins for SUGT1P1 Gene

Gene Ontology (GO) - Biological Process for SUGT1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SUGT1P1 Gene

Drugs & Compounds for SUGT1P1 Gene

No Compound Related Data Available

Transcripts for SUGT1P1 Gene

mRNA/cDNA for SUGT1P1 Gene

(1) Additional mRNA sequences :
(5) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SUGT1P1 Gene

Suppressor of G2 allele of SKP1 (S. cerevisiae) pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SUGT1P1 Gene

No ASD Table

Relevant External Links for SUGT1P1 Gene

GeneLoc Exon Structure for
SUGT1P1
ECgene alternative splicing isoforms for
SUGT1P1

Expression for SUGT1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SUGT1P1 Gene

mRNA differential expression in normal tissues according to GTEx for SUGT1P1 Gene

This gene is overexpressed in Testis (x9.7).

NURSA nuclear receptor signaling pathways regulating expression of SUGT1P1 Gene:

SUGT1P1

SOURCE GeneReport for Unigene cluster for SUGT1P1 Gene:

Hs.521441
genes like me logo Genes that share expression patterns with SUGT1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SUGT1P1 Gene

Orthologs for SUGT1P1 Gene

Evolution for SUGT1P1 Gene

ENSEMBL:
Gene Tree for SUGT1P1 (if available)
TreeFam:
Gene Tree for SUGT1P1 (if available)

No data available for Orthologs for SUGT1P1 Gene

Paralogs for SUGT1P1 Gene

No data available for Paralogs for SUGT1P1 Gene

Variants for SUGT1P1 Gene

Sequence variations from dbSNP and Humsavar for SUGT1P1 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs1000186101 -- 33,504,167(+) CACCA(C/G)GCCCG intron-variant
rs1000333183 -- 33,507,627(+) CTCTC(A/G)TAATT intron-variant
rs1000612295 -- 33,500,659(+) AGGCA(C/T)GGTGG downstream-variant-500B
rs1000643329 -- 33,500,807(+) AAACA(-/AAAC)AAACA intron-variant
rs1000852348 -- 33,507,261(+) ACTCA(C/T)TAGAT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for SUGT1P1 Gene

Variant ID Type Subtype PubMed ID
esv3576648 CNV gain 25503493
esv3620326 CNV gain 21293372
nsv1024207 CNV gain 25217958
nsv972306 CNV duplication 23825009

Relevant External Links for SUGT1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SUGT1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SUGT1P1 Gene

Disorders for SUGT1P1 Gene

Relevant External Links for SUGT1P1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SUGT1P1

No disorders were found for SUGT1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SUGT1P1 Gene

Publications for SUGT1P1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for SUGT1P1 Gene

Sources for SUGT1P1 Gene

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