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Aliases for SUGT1P1 Gene

Aliases for SUGT1P1 Gene

  • SGT1 Homolog, MIS12 Kinetochore Complex Assembly Cochaperone Pseudogene 1 2 3 5
  • SUGT1 Pseudogene 1 2 3
  • BA255A11.10 (Putative Novel T Cell Receptor Beta Chain V Region Protein) 3
  • Suppressor Of G2 Allele Of SKP1 Pseudogene 1 (S. Cerevisiae) 2
  • Suppressor Of G2 Allele Of SKP1 (S. Cerevisiae) Pseudogene 1 2
  • Suppressor Of G2 Allele Of SKP1 Pseudogene (S. Cerevisiae) 2
  • Suppressor Of G2 Allele Of SKP1 Pseudogene 1 3
  • BA255A11.1 3
  • SUGT1P 3
  • SGT1P 3

External Ids for SUGT1P1 Gene

Previous HGNC Symbols for SUGT1P1 Gene

  • SUGT1P

Summaries for SUGT1P1 Gene

GeneCards Summary for SUGT1P1 Gene

SUGT1P1 (SGT1 Homolog, MIS12 Kinetochore Complex Assembly Cochaperone Pseudogene 1) is a Pseudogene.

Additional gene information for SUGT1P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SUGT1P1 Gene

Genomics for SUGT1P1 Gene

GeneHancer (GH) Regulatory Elements for SUGT1P1 Gene

Promoters and enhancers for SUGT1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I033510 Promoter/Enhancer 1.4 Ensembl ENCODE 550.8 +0.1 113 1.9 PKNOX1 ATF1 SIN3A FEZF1 ZNF48 YY1 ZNF121 POLR2B GLIS2 ATF7 PIR50034 SUGT1P1 VN1R47P ANKRD18B PRSS3
GH09I033472 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 25.6 +37.6 37609 2.9 HDGF PKNOX1 FOXA2 SMAD1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 YY1 NOL6 NFX1 TOPORS ASS1P12 SMU1 TCEA1P4 ENSG00000228352 DFFBP1 ENSG00000223440 UBAP2
GH09I033455 Enhancer 1.2 Ensembl ENCODE dbSUPER 5.4 +53.3 53257 4.1 BATF IRF4 ELK1 RCOR1 ETV6 FOS RUNX3 ELK4 USF2 JUNB AQP7 NOL6 AQP3 LOC105376020 BAG1 CHMP5 SUGT1P1 PTENP1 GC09P033453 MIR6851
GH09I033426 Enhancer 0.7 ENCODE 6 +84.2 84153 1.2 NCOA3 MEIS2 ESRRA PKNOX1 NEUROD1 FOSL1 CTBP1 GATA3 EGR1 VEZF1 AQP3 SUGT1P1 NOL6 PIR43065
GH09I033466 Enhancer 0.7 ENCODE 4.7 +44.4 44358 0.2 HDGF CTCF RB1 ARID4B MAX ZNF2 RAD21 ARID2 SMC3 ZNF143 MIR6851 AQP7 LOC105376020 NFX1 CYP4F26P SUGT1P1 NOL6 GC09P033453
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SUGT1P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SUGT1P1 Gene

Genomic Locations for SUGT1P1 Gene
chr9:33,500,756-33,511,166
(GRCh38/hg38)
Size:
10,411 bases
Orientation:
Minus strand
chr9:33,500,754-33,511,164
(GRCh37/hg19)

Genomic View for SUGT1P1 Gene

Genes around SUGT1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SUGT1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SUGT1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SUGT1P1 Gene

Proteins for SUGT1P1 Gene

Post-translational modifications for SUGT1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SUGT1P1 Gene

Domains & Families for SUGT1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SUGT1P1 Gene

Function for SUGT1P1 Gene

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SUGT1P1 Gene

Localization for SUGT1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SUGT1P1 Gene

Pathways & Interactions for SUGT1P1 Gene

SuperPathways for SUGT1P1 Gene

No Data Available

Interacting Proteins for SUGT1P1 Gene

Gene Ontology (GO) - Biological Process for SUGT1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SUGT1P1 Gene

Drugs & Compounds for SUGT1P1 Gene

No Compound Related Data Available

Transcripts for SUGT1P1 Gene

mRNA/cDNA for SUGT1P1 Gene

(1) Additional mRNA sequences :
(5) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SUGT1P1 Gene

Suppressor of G2 allele of SKP1 (S. cerevisiae) pseudogene 1:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SUGT1P1 Gene

No ASD Table

Relevant External Links for SUGT1P1 Gene

GeneLoc Exon Structure for
SUGT1P1
ECgene alternative splicing isoforms for
SUGT1P1

Expression for SUGT1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SUGT1P1 Gene

mRNA differential expression in normal tissues according to GTEx for SUGT1P1 Gene

This gene is overexpressed in Testis (x9.7).

NURSA nuclear receptor signaling pathways regulating expression of SUGT1P1 Gene:

SUGT1P1

SOURCE GeneReport for Unigene cluster for SUGT1P1 Gene:

Hs.521441
genes like me logo Genes that share expression patterns with SUGT1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SUGT1P1 Gene

Orthologs for SUGT1P1 Gene

Evolution for SUGT1P1 Gene

ENSEMBL:
Gene Tree for SUGT1P1 (if available)
TreeFam:
Gene Tree for SUGT1P1 (if available)

No data available for Orthologs for SUGT1P1 Gene

Paralogs for SUGT1P1 Gene

No data available for Paralogs for SUGT1P1 Gene

Variants for SUGT1P1 Gene

Sequence variations from dbSNP and Humsavar for SUGT1P1 Gene

SNP ID Clin Chr 09 pos Variation AA Info Type
rs1000186101 -- 33,504,167(-) C/G intron_variant
rs1000333183 -- 33,507,627(-) A/G intron_variant
rs1000612295 -- 33,500,659(-) T/C downstream_transcript_variant
rs1000643329 -- 33,500,807(-) AAACAAACAAACAAA/AAACAAACAAA intron_variant
rs1000852348 -- 33,507,261(-) T/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for SUGT1P1 Gene

Variant ID Type Subtype PubMed ID
esv3576648 CNV gain 25503493
esv3620326 CNV gain 21293372
nsv1024207 CNV gain 25217958
nsv972306 CNV duplication 23825009

Additional Variant Information for SUGT1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SUGT1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SUGT1P1 Gene

Disorders for SUGT1P1 Gene

Additional Disease Information for SUGT1P1

No disorders were found for SUGT1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SUGT1P1 Gene

Publications for SUGT1P1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for SUGT1P1 Gene

Sources for SUGT1P1 Gene

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