Aliases for SUDS3P1 Gene
Aliases for SUDS3P1 Gene
External Ids for SUDS3P1 Gene
- HGNC: 44000
- Entrez Gene: 285647
- Ensembl: ENSG00000249129
Previous GeneCards Identifiers for SUDS3P1 Gene
- GC05P177401
Summaries for SUDS3P1 Gene
GeneCards Summary for SUDS3P1 Gene
SUDS3P1 (SDS3 Homolog, SIN3A Corepressor Complex Component Pseudogene 1) is a Pseudogene.
Additional gene information for SUDS3P1 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SUDS3P1 Gene
Genomics for SUDS3P1 Gene
GeneHancer (GH) Regulatory Elements for SUDS3P1 Gene
Promoters and enhancers for SUDS3P1 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH05I177402 | Promoter/Enhancer | 1.8 | Ensembl ENCODE dbSUPER | 10.7 | -567.5 | -567523 | 3.1 | HDGF SMAD1 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 POLR2B CBX5 | GRK6 ZNF346 ENSG00000247679 LOC202181 FAF2 ZNF346-IT1 LOC105377750 NSD1 FAM193B SUDS3P1 | |
| GH05I177377 | Enhancer | 1.3 | Ensembl ENCODE | 10.7 | -592.1 | -592111 | 2.2 | HDGF FOXA2 MLX ARNT ARID4B DMAP1 IRF4 YY1 SLC30A9 POLR2B | SLC34A1 RGS14 FAM193B NSD1 FAF2 ENSG00000247679 MXD3 ZNF346-IT1 UIMC1 LOC202181 | |
| GH05I177103 | Enhancer | 0.7 | dbSUPER | 10.7 | -867.3 | -867256 | 0.7 | ELF3 TFAP4 FOXA2 ZNF280D SAP130 FOXA3 SP2 ZHX2 GABPA ZNF776 | FGFR4 ZNF346 NSD1 ZNF346-IT1 SUDS3P1 ENSG00000247679 RGS14 GC05P176931 | |
| GH05I178489 | Enhancer | 0.3 | Ensembl | 10.1 | +518.3 | 518259 | 0.5 | ZNF140 | ZNF354B ENSG00000247679 LOC202181 ZNF879 B4GALT7 ZNF354C SUDS3P1 COL23A1 LOC105377756 PIR48624 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around SUDS3P1 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for SUDS3P1 Gene
Genomic Locations for SUDS3P1 Gene
- chr5:177,971,178-177,973,821
- (GRCh38/hg38)
- Size:
- 2,644 bases
- Orientation:
- Plus strand
- chr5:177,398,179-177,400,822
- (GRCh37/hg19)
Genomic View for SUDS3P1 Gene
Genes around SUDS3P1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 5q35.3 by Ensembl
- 5q35.3 by Entrez Gene
- 5q35.3 by HGNC
SUDS3P1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for SUDS3P1 Gene
Proteins for SUDS3P1 Gene
Post-translational modifications for SUDS3P1 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for SUDS3P1
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for SUDS3P1
- Origene Custom Protein Services for SUDS3P1
- Search GeneTex for Proteins for SUDS3P1
No data available for DME Specific Peptides for SUDS3P1 Gene
Domains & Families for SUDS3P1 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SUDS3P1 Gene
Function for SUDS3P1 Gene
Phenotypes From GWAS Catalog for SUDS3P1 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Search ViGene Biosciences for SUDS3P1
CRISPR Products
- Browse CRISPR knockouts for SUDS3P1
miRNA Products
- Search ViGene Biosciences for SUDS3P1
Inhibitory RNA Products
- Search ViGene Biosciences for SUDS3P1
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SUDS3P1 Gene
Localization for SUDS3P1 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SUDS3P1 Gene
Transcripts for SUDS3P1 Gene
mRNA/cDNA for SUDS3P1 Gene
- (2) Selected AceView cDNA sequences:
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for SUDS3P1
miRNA Products
- Search ViGene Biosciences for SUDS3P1
Inhibitory RNA Products
- Search ViGene Biosciences for SUDS3P1
Expression for SUDS3P1 Gene
mRNA differential expression in normal tissues according to GTEx for SUDS3P1 Gene
This gene is overexpressed in Pituitary (x6.2).
NURSA nuclear receptor signaling pathways regulating expression of SUDS3P1 Gene:
SUDS3P1
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SUDS3P1 Gene
Orthologs for SUDS3P1 Gene
No data available for Orthologs for SUDS3P1 Gene
Paralogs for SUDS3P1 Gene
No data available for Paralogs for SUDS3P1 Gene
Variants for SUDS3P1 Gene
Additional Variant Information for SUDS3P1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- SUDS3P1
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SUDS3P1 Gene
Disorders for SUDS3P1 Gene
No disorders were found for SUDS3P1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SUDS3P1 Gene
Publications for SUDS3P1 Gene
No publications were found for SUDS3P1 Gene.
Products for SUDS3P1 Gene
- Browse R&D Systems for Antibodies
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- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for SUDS3P1
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- Browse CRISPR knockouts for SUDS3P1
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- Cloud-Clone Corp. disease models service
- Browse cDNA clones at Cloud-Clone Corp.
- Browse primers at Cloud-Clone Corp.
- Cloud-Clone Corp. primary cells service
- Search GeneTex for Antibodies for SUDS3P1
- Search GeneTex for Proteins for SUDS3P1
- Search ViGene Biosciences for SUDS3P1
Sources for SUDS3P1 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew