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Aliases for SUDS3P1 Gene

Aliases for SUDS3P1 Gene

  • SDS3 Homolog, SIN3A Corepressor Complex Component Pseudogene 1 2 3 5
  • Suppressor Of Defective Silencing 3 Homolog (S. Cerevisiae) Pseudogene 1 2
  • SUDS3 Pseudogene 1 2

External Ids for SUDS3P1 Gene

Previous GeneCards Identifiers for SUDS3P1 Gene

  • GC05P177401

Summaries for SUDS3P1 Gene

GeneCards Summary for SUDS3P1 Gene

SUDS3P1 (SDS3 Homolog, SIN3A Corepressor Complex Component Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SUDS3P1 Gene

Genomics for SUDS3P1 Gene

Regulatory Elements for SUDS3P1 Gene

Enhancers for SUDS3P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05F177021 1.2 ENCODE 10.1 -948.6 -948638 2.7 HDGF PKNOX1 ARNT CREB3L1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF416 FAF2 ENSG00000250909 ENSG00000251414 ENSG00000247679 ZNF346 LOC202181 ZNF346-IT1 RPL21P60 B4GALT7 PRMT1P1
GH05F178729 1 ENCODE 10.1 +759.3 759257 1.8 ATF1 CREB3L1 ZFP64 ARID4B SIN3A ZNF2 ETS1 GLIS2 ZNF143 KLF7 ZNF354B ZNF354A ZNF879 ZNF454 LOC105377763 LOC100130798 ZFP2 ADAMTS2 HNRNPAB ENSG00000272431
GH05F178486 1 FANTOM5 Ensembl 10.1 +515.4 515423 1.2 ZNF202 ZNF680 RNF2 ZNF266 MAX ZNF140 REST ZNF781 ZNF518A ZNF101 ENSG00000247679 ZNF354B LOC202181 ZNF879 ZNF354C LOC100130798 ZFP2 ENSG00000272431 B4GALT7 SUDS3P1
GH05F177837 0.9 Ensembl 10.1 -133.6 -133573 0.4 ZFP64 ZNF302 ZNF138 ZNF354C ZNF366 KLF7 FOS ZNF202 ZNF680 ZNF654 ENSG00000247679 LOC202181 ZNF346-IT1 RPL21P60 ZNF346 CLK4 HNRNPAB B4GALT7 SUDS3P1 PRMT1P1
GH05F178489 0.5 Ensembl 10.1 +518.4 518423 1.2 ZNF316 ZNF140 MAFK ZNF354B ENSG00000247679 LOC202181 ZNF879 B4GALT7 ZNF354C SUDS3P1 COL23A1 LOC105377756 PIR48624
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SUDS3P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for SUDS3P1 Gene

Chromosome:
5
Start:
177,971,178 bp from pter
End:
177,973,821 bp from pter
Size:
2,644 bases
Orientation:
Plus strand

Genomic View for SUDS3P1 Gene

Genes around SUDS3P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SUDS3P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SUDS3P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SUDS3P1 Gene

Proteins for SUDS3P1 Gene

Post-translational modifications for SUDS3P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SUDS3P1 Gene

Domains & Families for SUDS3P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SUDS3P1 Gene

Function for SUDS3P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SUDS3P1 Gene

Localization for SUDS3P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SUDS3P1 Gene

Pathways & Interactions for SUDS3P1 Gene

SuperPathways for SUDS3P1 Gene

No Data Available

Interacting Proteins for SUDS3P1 Gene

Gene Ontology (GO) - Biological Process for SUDS3P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SUDS3P1 Gene

Transcripts for SUDS3P1 Gene

mRNA/cDNA for SUDS3P1 Gene

(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SUDS3P1 Gene

No ASD Table

Relevant External Links for SUDS3P1 Gene

GeneLoc Exon Structure for
SUDS3P1
ECgene alternative splicing isoforms for
SUDS3P1

Expression for SUDS3P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SUDS3P1 Gene

mRNA differential expression in normal tissues according to GTEx for SUDS3P1 Gene

This gene is overexpressed in Pituitary (x6.2).

NURSA nuclear receptor signaling pathways regulating expression of SUDS3P1 Gene:

SUDS3P1
genes like me logo Genes that share expression patterns with SUDS3P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SUDS3P1 Gene

Orthologs for SUDS3P1 Gene

Evolution for SUDS3P1 Gene

ENSEMBL:
Gene Tree for SUDS3P1 (if available)
TreeFam:
Gene Tree for SUDS3P1 (if available)

No data available for Orthologs for SUDS3P1 Gene

Paralogs for SUDS3P1 Gene

No data available for Paralogs for SUDS3P1 Gene

Variants for SUDS3P1 Gene

Relevant External Links for SUDS3P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SUDS3P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SUDS3P1 Gene

Disorders for SUDS3P1 Gene

No disorders were found for SUDS3P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SUDS3P1 Gene

Publications for SUDS3P1 Gene

No publications were found for SUDS3P1 Gene.

Products for SUDS3P1 Gene

Sources for SUDS3P1 Gene

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