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Aliases for SUCLG2-AS1 Gene

Subcategory (RNA class) for SUCLG2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for SUCLG2-AS1 Gene

  • SUCLG2 Antisense RNA 1 (Head To Head) 2 3 5

External Ids for SUCLG2-AS1 Gene

Previous GeneCards Identifiers for SUCLG2-AS1 Gene

  • GC03P067708

Summaries for SUCLG2-AS1 Gene

GeneCards Summary for SUCLG2-AS1 Gene

SUCLG2-AS1 (SUCLG2 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SUCLG2-AS1 Gene

Genomics for SUCLG2-AS1 Gene

Regulatory Elements for SUCLG2-AS1 Gene

Enhancers for SUCLG2-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03G067652 1.1 ENCODE 41.1 -0.2 -212 4.3 HDGF HNRNPUL1 MLX ZFP64 SIN3A DMAP1 YY1 SLC30A9 CBX5 ZNF207 SUCLG2-AS1 SUCLG2 GC03P067630
GH03G067646 1.2 Ensembl ENCODE 36.2 -5.8 -5808 5.5 FOXA2 ATF1 ARID4B SIN3A DMAP1 YY1 GATA2 FOS SP5 MIER2 SUCLG2-AS1 SUCLG2 GC03P067630
GH03G067634 0.6 ENCODE 34.3 -19.2 -19184 1.7 JUNB TBX21 ATF2 JUND CREB1 RELB FOS ETV6 IKZF2 SUCLG2-AS1 GC03P067630 SUCLG2
GH03G067610 0.6 ENCODE 26.4 -44.0 -43990 1.1 JUND FOXA2 JUN ZNF384 FOS NR2F2 SUCLG2-AS1 LOC105377148 GC03P067513
GH03G067661 0.4 FANTOM5 33.5 +6.7 6733 0.3 NR2F2 SUCLG2-AS1 GC03P067687
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SUCLG2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for SUCLG2-AS1 Gene

Chromosome:
3
Start:
67,654,697 bp from pter
End:
67,947,713 bp from pter
Size:
293,017 bases
Orientation:
Plus strand

Genomic View for SUCLG2-AS1 Gene

Genes around SUCLG2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SUCLG2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SUCLG2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SUCLG2-AS1 Gene

Proteins for SUCLG2-AS1 Gene

Post-translational modifications for SUCLG2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SUCLG2-AS1 Gene

Domains & Families for SUCLG2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SUCLG2-AS1 Gene

Function for SUCLG2-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SUCLG2-AS1 Gene

Localization for SUCLG2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SUCLG2-AS1 Gene

Pathways & Interactions for SUCLG2-AS1 Gene

SuperPathways for SUCLG2-AS1 Gene

No Data Available

Interacting Proteins for SUCLG2-AS1 Gene

Gene Ontology (GO) - Biological Process for SUCLG2-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SUCLG2-AS1 Gene

Drugs & Compounds for SUCLG2-AS1 Gene

No Compound Related Data Available

Transcripts for SUCLG2-AS1 Gene

mRNA/cDNA for SUCLG2-AS1 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SUCLG2-AS1 Gene

No ASD Table

Relevant External Links for SUCLG2-AS1 Gene

GeneLoc Exon Structure for
SUCLG2-AS1
ECgene alternative splicing isoforms for
SUCLG2-AS1

Expression for SUCLG2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SUCLG2-AS1 Gene

genes like me logo Genes that share expression patterns with SUCLG2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SUCLG2-AS1 Gene

Orthologs for SUCLG2-AS1 Gene

Evolution for SUCLG2-AS1 Gene

ENSEMBL:
Gene Tree for SUCLG2-AS1 (if available)
TreeFam:
Gene Tree for SUCLG2-AS1 (if available)

No data available for Orthologs for SUCLG2-AS1 Gene

Paralogs for SUCLG2-AS1 Gene

No data available for Paralogs for SUCLG2-AS1 Gene

Variants for SUCLG2-AS1 Gene

Sequence variations from dbSNP and Humsavar for SUCLG2-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs1000001660 -- 67,706,271(+) AGATT(A/G)TTTTG intron-variant
rs1000005456 -- 67,707,848(+) ACCTC(A/G)AACTC intron-variant
rs1000015715 -- 67,745,942(+) CTTCT(A/T)TTTTT intron-variant
rs1000059829 -- 67,947,211(+) CGCCT(C/G)CCAGG nc-transcript-variant
rs1000062556 -- 67,661,706(+) TAGCT(C/T)ACTGC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for SUCLG2-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2164578 CNV deletion 18987734
esv2627512 CNV deletion 19546169
esv2663868 CNV deletion 23128226
esv2668635 CNV deletion 23128226
esv2672133 CNV deletion 23128226
esv3417987 CNV insertion 20981092
esv3596468 CNV loss 21293372
esv3596469 CNV gain 21293372
esv3596470 CNV loss 21293372
esv3596471 CNV loss 21293372
esv3596472 CNV loss 21293372
esv3596473 CNV loss 21293372
esv3596474 CNV loss 21293372
esv3893719 CNV loss 25118596
nsv1003158 CNV loss 25217958
nsv1013531 CNV gain 25217958
nsv1014671 CNV gain 25217958
nsv1126650 CNV deletion 24896259
nsv460700 CNV loss 19166990
nsv470638 CNV loss 18288195
nsv507101 OTHER sequence alteration 20534489
nsv590560 CNV loss 21841781
nsv834720 CNV gain 17160897

Relevant External Links for SUCLG2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SUCLG2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SUCLG2-AS1 Gene

Disorders for SUCLG2-AS1 Gene

Relevant External Links for SUCLG2-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SUCLG2-AS1

No disorders were found for SUCLG2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SUCLG2-AS1 Gene

Publications for SUCLG2-AS1 Gene

No publications were found for SUCLG2-AS1 Gene.

Products for SUCLG2-AS1 Gene

Sources for SUCLG2-AS1 Gene

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