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SUCLA2P1 Gene(Pseudogene)

Succinate-CoA Ligase ADP-Forming Beta Subunit Pseudogene 1

GCID:
GC06P030468
GIFtS:
11
Genes Participants
UDN Logo

Aliases for SUCLA2P1 Gene

Aliases for SUCLA2P1 Gene

  • Succinate-CoA Ligase ADP-Forming Beta Subunit Pseudogene 1 2 3 5
  • Succinate-CoA Ligase Beta Subunit Pseudogene 1 2 3
  • Em:AB014080.4 3
  • SUCLA2P 3

External Ids for SUCLA2P1 Gene

Previous HGNC Symbols for SUCLA2P1 Gene

  • SUCLA2P

Previous GeneCards Identifiers for SUCLA2P1 Gene

  • GC06P030437
  • GC06P030556

Summaries for SUCLA2P1 Gene

GeneCards Summary for SUCLA2P1 Gene

SUCLA2P1 (Succinate-CoA Ligase ADP-Forming Beta Subunit Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SUCLA2P1 Gene

Genomics for SUCLA2P1 Gene

Products:

  1. Regulatory Element

Regulatory Elements for SUCLA2P1 Gene

Enhancers for SUCLA2P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F030466 0.7 FANTOM5 0.8 -2.0 -1968 0.3 BCOR ZNF362 L3MBTL2 RNF2 NRF1 NR4A1 ZNF384 SMARCA4 MBD1 BCL6 VARS2 DDR1 SUCLA2P1 TMPOP1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SUCLA2P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for SUCLA2P1 Gene

Chromosome:
6
Start:
30,468,873 bp from pter
End:
30,470,922 bp from pter
Size:
2,050 bases
Orientation:
Plus strand

Genomic View for SUCLA2P1 Gene

Genes around SUCLA2P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SUCLA2P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SUCLA2P1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for SUCLA2P1 Gene

Proteins for SUCLA2P1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for SUCLA2P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SUCLA2P1 Gene

Domains & Families for SUCLA2P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SUCLA2P1 Gene

Function for SUCLA2P1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Animal Model Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SUCLA2P1 Gene

Localization for SUCLA2P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SUCLA2P1 Gene

Pathways & Interactions for SUCLA2P1 Gene

SuperPathways for SUCLA2P1 Gene

PathCards logo More details on SuperPathways for SUCLA2P1
No Data Available

Interacting Proteins for SUCLA2P1 Gene

Gene Ontology (GO) - Biological Process for SUCLA2P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SUCLA2P1 Gene

Drugs & Compounds for SUCLA2P1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for SUCLA2P1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for SUCLA2P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for SUCLA2P1 Gene

No ASD Table

Relevant External Links for SUCLA2P1 Gene

GeneLoc Exon Structure for
SUCLA2P1
ECgene alternative splicing isoforms for
SUCLA2P1

Expression for SUCLA2P1 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SUCLA2P1 Gene

mRNA expression in normal human tissues for SUCLA2P1 Gene
mRNA expression by GTEx for SUCLA2P1 Gene

mRNA differential expression in normal tissues according to GTEx for SUCLA2P1 Gene

This gene is overexpressed in Testis (x7.4).

NURSA nuclear receptor signaling pathways regulating expression of SUCLA2P1 Gene:

SUCLA2P1
genes like me logo Genes that share expression patterns with SUCLA2P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SUCLA2P1 Gene

Orthologs for SUCLA2P1 Gene

Evolution for SUCLA2P1 Gene

ENSEMBL:
Gene Tree for SUCLA2P1 (if available)
TreeFam:
Gene Tree for SUCLA2P1 (if available)

No data available for Orthologs for SUCLA2P1 Gene

Paralogs for SUCLA2P1 Gene

No data available for Paralogs for SUCLA2P1 Gene

Variants for SUCLA2P1 Gene

Relevant External Links for SUCLA2P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SUCLA2P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SUCLA2P1 Gene

Disorders for SUCLA2P1 Gene

Relevant External Links for SUCLA2P1

Human Genome Epidemiology (HuGE) Navigator
SUCLA2P1

No disorders were found for SUCLA2P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SUCLA2P1 Gene

Publications for SUCLA2P1 Gene

  1. High-density SNP screening of the major histocompatibility complex in systemic lupus erythematosus demonstrates strong evidence for independent susceptibility regions. (PMID: 19851445) Barcellos L.F. … Criswell L.A. (PLoS Genet. 2009) 3 64

Products for SUCLA2P1 Gene

Sources for SUCLA2P1 Gene

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